RNA–Protein interactions for RNA: ENST00000513799.5

TMED9-206, Transcript of transmembrane p24 trafficking protein 9, humanhuman

TSL 2

Gene TMED9, Length 772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED9-206ENST00000513799 CCDC34Q96HJ3 373 aa13.16□□□□□ -0.3
TMED9-206ENST00000513799 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.16□□□□□ -0.32e-6■■■□□ 14.9
TMED9-206ENST00000513799 INO80BQ9C086 356 aaPredicted RBP13.16□□□□□ -0.3
TMED9-206ENST00000513799 C2orf40Q9H1Z8 148 aa13.16□□□□□ -0.3
TMED9-206ENST00000513799 TMX1Q9H3N1 280 aa13.16□□□□□ -0.3
TMED9-206ENST00000513799 FZD8Q9H461 694 aa13.16□□□□□ -0.3
TMED9-206ENST00000513799 ST6GALNAC4Q9H4F1 302 aa13.16□□□□□ -0.3
TMED9-206ENST00000513799 EXOC1Q9NV70 894 aa13.16□□□□□ -0.3
TMED9-206ENST00000513799 TMEM63CQ9P1W3 806 aa13.16□□□□□ -0.3
TMED9-206ENST00000513799 ST3GAL5Q9UNP4 418 aa13.16□□□□□ -0.3
TMED9-206ENST00000513799 USP20Q9Y2K6 914 aa13.16□□□□□ -0.3
TMED9-206ENST00000513799 SQORQ9Y6N5 450 aa13.16□□□□□ -0.3
TMED9-206ENST00000513799 RPS6KA5O75582 802 aa13.15□□□□□ -0.3
TMED9-206ENST00000513799 PARNO95453 639 aaKnown RBP13.15□□□□□ -0.3
TMED9-206ENST00000513799 PTMSP20962 102 aa13.15□□□□□ -0.3
TMED9-206ENST00000513799 EFNA5P52803 228 aa13.15□□□□□ -0.3
TMED9-206ENST00000513799 GTF2BQ00403 316 aa13.15□□□□□ -0.3
TMED9-206ENST00000513799 STK4Q13043 487 aa13.15□□□□□ -0.3
TMED9-206ENST00000513799 PAK2Q13177 524 aa13.15□□□□□ -0.3
TMED9-206ENST00000513799 FAM187BQ17R55 369 aa13.15□□□□□ -0.3
TMED9-206ENST00000513799 PLEKHG4Q58EX7 1191 aa13.15□□□□□ -0.3
TMED9-206ENST00000513799 RBM43Q6ZSC3 357 aaKnown RBP13.15□□□□□ -0.3
TMED9-206ENST00000513799 ZNF720Q7Z2F6 126 aa13.15□□□□□ -0.3
TMED9-206ENST00000513799 DEFB128Q7Z7B8 93 aa13.15□□□□□ -0.3
TMED9-206ENST00000513799 USP38Q8NB14 1042 aa13.15□□□□□ -0.3
TMED9-206ENST00000513799 LINC01599Q8WXQ3 324 aa13.15□□□□□ -0.3
TMED9-206ENST00000513799 SMARCE1Q969G3 411 aa13.15□□□□□ -0.3
TMED9-206ENST00000513799 IFIH1Q9BYX4 1025 aaKnown RBP13.15□□□□□ -0.3
TMED9-206ENST00000513799 IKZF4Q9H2S9 585 aa13.15□□□□□ -0.3
TMED9-206ENST00000513799 MRPL44Q9H9J2 332 aaKnown RBP13.15□□□□□ -0.3
TMED9-206ENST00000513799 IL23AQ9NPF7 189 aa13.15□□□□□ -0.3
TMED9-206ENST00000513799 HOOK1Q9UJC3 728 aaKnown RBP13.15□□□□□ -0.3
TMED9-206ENST00000513799 MAN1B1Q9UKM7 699 aa13.15□□□□□ -0.3
TMED9-206ENST00000513799 PADI3Q9ULW8 664 aa13.15□□□□□ -0.3
TMED9-206ENST00000513799 ZMYM2Q9UBW7 1377 aa13.15□□□□□ -0.3
TMED9-206ENST00000513799 CNTNAP2Q9UHC6 1331 aa13.14□□□□□ -0.31
TMED9-206ENST00000513799 MYH11P35749 1972 aa13.14□□□□□ -0.31
TMED9-206ENST00000513799 MGEA5O60502 916 aa13.14□□□□□ -0.31
TMED9-206ENST00000513799 SMC2O95347 1197 aa13.14□□□□□ -0.31
TMED9-206ENST00000513799 FGBP02675 491 aa13.14□□□□□ -0.31
TMED9-206ENST00000513799 PRKCBP05771 671 aa13.14□□□□□ -0.31
TMED9-206ENST00000513799 PFKMP08237 780 aa13.14□□□□□ -0.31
TMED9-206ENST00000513799 ACRP10323 421 aa13.14□□□□□ -0.31
TMED9-206ENST00000513799 BMP6P22004 513 aa13.14□□□□□ -0.31
TMED9-206ENST00000513799 SFPQP23246 707 aaKnown RBP eCLIP13.14□□□□□ -0.31
TMED9-206ENST00000513799 HOXA11P31270 313 aaPredicted RBP13.14□□□□□ -0.31
TMED9-206ENST00000513799 HOXD13P35453 343 aa13.14□□□□□ -0.31
TMED9-206ENST00000513799 SMTNP53814 917 aa13.14□□□□□ -0.31
TMED9-206ENST00000513799 KCNA1Q09470 495 aa13.14□□□□□ -0.31
TMED9-206ENST00000513799 MAPK6Q16659 721 aa13.14□□□□□ -0.31
TMED9-206ENST00000513799 CCDC183Q5T5S1 534 aa13.14□□□□□ -0.31
TMED9-206ENST00000513799 C16orf59Q7L2K0 433 aa13.14□□□□□ -0.31
TMED9-206ENST00000513799 MAP4K3Q8IVH8 894 aa13.14□□□□□ -0.31
TMED9-206ENST00000513799 SCFD1Q8WVM8 642 aa13.14□□□□□ -0.31
TMED9-206ENST00000513799 GSDMAQ96QA5 445 aa13.14□□□□□ -0.31
TMED9-206ENST00000513799 TMEM134Q9H6X4 195 aa13.14□□□□□ -0.31
TMED9-206ENST00000513799 SLC39A2Q9NP94 309 aa13.14□□□□□ -0.31
TMED9-206ENST00000513799 AGPAT5Q9NUQ2 364 aa13.14□□□□□ -0.31
TMED9-206ENST00000513799 KIAA1468Q9P260 1216 aa13.14□□□□□ -0.31
TMED9-206ENST00000513799 TBX20Q9UMR3 447 aa13.14□□□□□ -0.31
TMED9-206ENST00000513799 GDAQ9Y2T3 454 aa13.14□□□□□ -0.31
TMED9-206ENST00000513799 H0YCG3 227 aa13.13□□□□□ -0.31
TMED9-206ENST00000513799 ACKR2O00590 384 aa13.13□□□□□ -0.31
TMED9-206ENST00000513799 EIF3DO15371 548 aaKnown RBP eCLIP13.13□□□□□ -0.31
TMED9-206ENST00000513799 GCNT3O95395 438 aa13.13□□□□□ -0.31
TMED9-206ENST00000513799 ACTN1P12814 892 aa13.13□□□□□ -0.31
TMED9-206ENST00000513799 ARF4P18085 180 aaPredicted RBP13.13□□□□□ -0.31
TMED9-206ENST00000513799 NFX1Q12986 1120 aaKnown RBP13.13□□□□□ -0.31
TMED9-206ENST00000513799 PSMD2Q13200 908 aa13.13□□□□□ -0.31
TMED9-206ENST00000513799 MORC3Q14149 939 aa13.13□□□□□ -0.31
TMED9-206ENST00000513799 DSC3Q14574 896 aa13.13□□□□□ -0.31
TMED9-206ENST00000513799 TMEM240Q5SV17 173 aa13.13□□□□□ -0.31
TMED9-206ENST00000513799 L1TD1Q5T7N2 865 aaKnown RBP13.13□□□□□ -0.31
TMED9-206ENST00000513799 CAVIN1Q6NZI2 390 aaKnown RBP13.13□□□□□ -0.31
TMED9-206ENST00000513799 ZNF365Q70YC5 407 aa13.13□□□□□ -0.31
TMED9-206ENST00000513799 CATSPER4Q7RTX7 472 aa13.13□□□□□ -0.31
TMED9-206ENST00000513799 SMYD4Q8IYR2 804 aaPredicted RBP13.13□□□□□ -0.31
TMED9-206ENST00000513799 DBF4BQ8NFT6 615 aa13.13□□□□□ -0.31
TMED9-206ENST00000513799 HVCN1Q96D96 273 aa13.13□□□□□ -0.31
TMED9-206ENST00000513799 PRIMPOLQ96LW4 560 aa13.13□□□□□ -0.31
TMED9-206ENST00000513799 PRMT7Q9NVM4 692 aaPredicted RBP13.13□□□□□ -0.31
TMED9-206ENST00000513799 RMND1Q9NWS8 449 aa13.13□□□□□ -0.31
TMED9-206ENST00000513799 KCNG1Q9UIX4 513 aa13.13□□□□□ -0.31
TMED9-206ENST00000513799 MSRAQ9UJ68 235 aa13.13□□□□□ -0.31
TMED9-206ENST00000513799 UBE4BO95155 1302 aa13.13□□□□□ -0.31
TMED9-206ENST00000513799 ZBBXA8MT70 800 aa13.12□□□□□ -0.31
TMED9-206ENST00000513799 TISP43B9A030 160 aa13.12□□□□□ -0.31
TMED9-206ENST00000513799 K7ERI5 159 aa13.12□□□□□ -0.31
TMED9-206ENST00000513799 BIN1O00499 593 aa13.12□□□□□ -0.31
TMED9-206ENST00000513799 ABLIM1O14639 778 aa13.12□□□□□ -0.31
TMED9-206ENST00000513799 GPR182O15218 404 aa13.12□□□□□ -0.31
TMED9-206ENST00000513799 ERLIN2O94905 339 aa13.12□□□□□ -0.31
TMED9-206ENST00000513799 PRPF6O94906 941 aaKnown RBP13.12□□□□□ -0.31
TMED9-206ENST00000513799 PIGRP01833 764 aa13.12□□□□□ -0.31
TMED9-206ENST00000513799 SCP2P22307 547 aa13.12□□□□□ -0.31
TMED9-206ENST00000513799 DNAJB2P25686 324 aa13.12□□□□□ -0.31
TMED9-206ENST00000513799 PRPF4BQ13523 1007 aaKnown RBP13.12□□□□□ -0.31
TMED9-206ENST00000513799 ALCAMQ13740 583 aa13.12□□□□□ -0.31
TMED9-206ENST00000513799 PCBP1Q15365 356 aaKnown RBP eCLIP13.12□□□□□ -0.312e-10■□□□□ 10.4
TMED9-206ENST00000513799 RAB30Q15771 203 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms