RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 C10orf76Q5T2E6 689 aa9.12□□□□□ -0.95
RNF4-220ENST00000513578 TCERG1LQ5VWI1 586 aa9.12□□□□□ -0.95
RNF4-220ENST00000513578 SLFN12LQ6IEE8 588 aa9.12□□□□□ -0.95
RNF4-220ENST00000513578 TAS1R3Q7RTX0 852 aa9.12□□□□□ -0.95
RNF4-220ENST00000513578 IRF2BP2Q7Z5L9 587 aa9.12□□□□□ -0.95
RNF4-220ENST00000513578 GPR142Q7Z601 462 aa9.12□□□□□ -0.95
RNF4-220ENST00000513578 PLEKHH3Q7Z736 793 aa9.12□□□□□ -0.95
RNF4-220ENST00000513578 USP37Q86T82 979 aa9.12□□□□□ -0.95
RNF4-220ENST00000513578 RASAL3Q86YV0 1011 aa9.12□□□□□ -0.95
RNF4-220ENST00000513578 LMO3Q8TAP4 145 aa9.12□□□□□ -0.95
RNF4-220ENST00000513578 ZNF592Q92610 1267 aa9.12□□□□□ -0.95
RNF4-220ENST00000513578 SH2D3AQ9BRG2 576 aa9.12□□□□□ -0.95
RNF4-220ENST00000513578 CBWD1Q9BRT8 395 aa9.12□□□□□ -0.95
RNF4-220ENST00000513578 CRACR2AQ9BSW2 395 aa9.12□□□□□ -0.95
RNF4-220ENST00000513578 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.12□□□□□ -0.95
RNF4-220ENST00000513578 SLC5A4Q9NY91 659 aa9.12□□□□□ -0.95
RNF4-220ENST00000513578 GCNT4Q9P109 453 aa9.12□□□□□ -0.95
RNF4-220ENST00000513578 COQ4Q9Y3A0 265 aa9.12□□□□□ -0.95
RNF4-220ENST00000513578 COL1A2P08123 1366 aa9.12□□□□□ -0.95
RNF4-220ENST00000513578 NOP56O00567 594 aaKnown RBP9.11□□□□□ -0.95
RNF4-220ENST00000513578 ZNF263O14978 683 aa9.11□□□□□ -0.95
RNF4-220ENST00000513578 FANCGO15287 622 aa9.11□□□□□ -0.95
RNF4-220ENST00000513578 ASAP2O43150 1006 aa9.11□□□□□ -0.95
RNF4-220ENST00000513578 ADCY3O60266 1144 aa9.11□□□□□ -0.95
RNF4-220ENST00000513578 SLU7O95391 586 aaKnown RBP9.11□□□□□ -0.95
RNF4-220ENST00000513578 SNAI1O95863 264 aaPredicted RBP9.11□□□□□ -0.95
RNF4-220ENST00000513578 LDHAP00338 332 aaKnown RBP9.11□□□□□ -0.95
RNF4-220ENST00000513578 HOXC6P09630 235 aa9.11□□□□□ -0.95
RNF4-220ENST00000513578 FERP16591 822 aa9.11□□□□□ -0.95
RNF4-220ENST00000513578 HUNKP57058 714 aa9.11□□□□□ -0.95
RNF4-220ENST00000513578 CLDN10P78369 228 aa9.11□□□□□ -0.95
RNF4-220ENST00000513578 MYL7Q01449 175 aa9.11□□□□□ -0.95
RNF4-220ENST00000513578 POU5F1BQ06416 359 aa9.11□□□□□ -0.95
RNF4-220ENST00000513578 STRN3Q13033 797 aa9.11□□□□□ -0.95
RNF4-220ENST00000513578 MXD4Q14582 209 aaPredicted RBP9.11□□□□□ -0.95
RNF4-220ENST00000513578 PLCB4Q15147 1175 aa9.11□□□□□ -0.95
RNF4-220ENST00000513578 ASIC2Q16515 512 aa9.11□□□□□ -0.95
RNF4-220ENST00000513578 SNRNP35Q16560 246 aaKnown RBP9.11□□□□□ -0.95
RNF4-220ENST00000513578 EPC2Q52LR7 807 aa9.11□□□□□ -0.95
RNF4-220ENST00000513578 ZNF484Q5JVG2 852 aa9.11□□□□□ -0.95
RNF4-220ENST00000513578 WDR78Q5VTH9 848 aa9.11□□□□□ -0.95
RNF4-220ENST00000513578 CDCA2Q69YH5 1023 aaPredicted RBP9.11□□□□□ -0.95
RNF4-220ENST00000513578 IQSEC1Q6DN90 963 aa9.11□□□□□ -0.95
RNF4-220ENST00000513578 SLC39A4Q6P5W5 647 aa9.11□□□□□ -0.95
RNF4-220ENST00000513578 ZPBP2Q6X784 338 aa9.11□□□□□ -0.95
RNF4-220ENST00000513578 EEPD1Q7L9B9 569 aa9.11□□□□□ -0.95
RNF4-220ENST00000513578 FBXO16Q8IX29 292 aaPredicted RBP9.11□□□□□ -0.95
RNF4-220ENST00000513578 GPD1LQ8N335 351 aa9.11□□□□□ -0.95
RNF4-220ENST00000513578 PPTC7Q8NI37 304 aa9.11□□□□□ -0.95
RNF4-220ENST00000513578 ASAP3Q8TDY4 903 aa9.11□□□□□ -0.95
RNF4-220ENST00000513578 PARD3BQ8TEW8 1205 aa9.11□□□□□ -0.95
RNF4-220ENST00000513578 JAKMIP2Q96AA8 810 aa9.11□□□□□ -0.95
RNF4-220ENST00000513578 ERO1AQ96HE7 468 aa9.11□□□□□ -0.95
RNF4-220ENST00000513578 MAML3Q96JK9 1138 aa9.11□□□□□ -0.95
RNF4-220ENST00000513578 SPATA33Q96N06 139 aa9.11□□□□□ -0.95
RNF4-220ENST00000513578 STK33Q9BYT3 514 aa9.11□□□□□ -0.95
RNF4-220ENST00000513578 INTS2Q9H0H0 1204 aaKnown RBP9.11□□□□□ -0.95
RNF4-220ENST00000513578 ABHD16BQ9H3Z7 469 aa9.11□□□□□ -0.95
RNF4-220ENST00000513578 NLRC4Q9NPP4 1024 aa9.11□□□□□ -0.95
RNF4-220ENST00000513578 LUC7LQ9NQ29 371 aaKnown RBP9.11□□□□□ -0.95
RNF4-220ENST00000513578 APEX2Q9UBZ4 518 aa9.11□□□□□ -0.95
RNF4-220ENST00000513578 NENFQ9UMX5 172 aa9.11□□□□□ -0.95
RNF4-220ENST00000513578 PCDHA13Q9Y5I0 950 aa9.11□□□□□ -0.95
RNF4-220ENST00000513578 ANK1P16157 1881 aa9.11□□□□□ -0.95
RNF4-220ENST00000513578 PASKQ96RG2 1323 aa9.1□□□□□ -0.95
RNF4-220ENST00000513578 BTNL10A8MVZ5 291 aa9.1□□□□□ -0.95
RNF4-220ENST00000513578 ZBTB42B2RXF5 422 aa9.1□□□□□ -0.95
RNF4-220ENST00000513578 K7ERI5 159 aa9.1□□□□□ -0.95
RNF4-220ENST00000513578 EXTL3O43909 919 aa9.1□□□□□ -0.95
RNF4-220ENST00000513578 AKR1B10O60218 316 aa9.1□□□□□ -0.95
RNF4-220ENST00000513578 PPFIA4O75335 1185 aa9.1□□□□□ -0.95
RNF4-220ENST00000513578 ADRB2P07550 413 aa9.1□□□□□ -0.95
RNF4-220ENST00000513578 CCDC172P0C7W6 258 aa9.1□□□□□ -0.95
RNF4-220ENST00000513578 STAT1P42224 750 aa9.1□□□□□ -0.95
RNF4-220ENST00000513578 SOX10P56693 466 aa9.1□□□□□ -0.95
RNF4-220ENST00000513578 TUBB4BP68371 445 aa9.1□□□□□ -0.95
RNF4-220ENST00000513578 CYP24A1Q07973 514 aa9.1□□□□□ -0.95
RNF4-220ENST00000513578 PPP3CAQ08209 521 aa9.1□□□□□ -0.95
RNF4-220ENST00000513578 KIF5AQ12840 1032 aa9.1□□□□□ -0.95
RNF4-220ENST00000513578 SLC18A3Q16572 532 aa9.1□□□□□ -0.95
RNF4-220ENST00000513578 CBWD6Q4V339 395 aa9.1□□□□□ -0.95
RNF4-220ENST00000513578 CBWD3Q5JTY5 395 aa9.1□□□□□ -0.95
RNF4-220ENST00000513578 CBWD5Q5RIA9 395 aa9.1□□□□□ -0.95
RNF4-220ENST00000513578 MORN1Q5T089 497 aa9.1□□□□□ -0.95
RNF4-220ENST00000513578 IQCEQ6IPM2 695 aa9.1□□□□□ -0.95
RNF4-220ENST00000513578 RGMBQ6NW40 437 aa9.1□□□□□ -0.95
RNF4-220ENST00000513578 KIAA1328Q86T90 577 aa9.1□□□□□ -0.95
RNF4-220ENST00000513578 IFNLR1Q8IU57 520 aaPredicted RBP9.1□□□□□ -0.95
RNF4-220ENST00000513578 RNF10Q8N5U6 811 aaKnown RBP9.1□□□□□ -0.95
RNF4-220ENST00000513578 DEPTORQ8TB45 409 aa9.1□□□□□ -0.95
RNF4-220ENST00000513578 GLG1Q92896 1179 aa9.1□□□□□ -0.95
RNF4-220ENST00000513578 TMEM143Q96AN5 459 aa9.1□□□□□ -0.95
RNF4-220ENST00000513578 FAM81BQ96LP2 452 aa9.1□□□□□ -0.95
RNF4-220ENST00000513578 SPAG5Q96R06 1193 aa9.1□□□□□ -0.95
RNF4-220ENST00000513578 WDR24Q96S15 920 aa9.1□□□□□ -0.95
RNF4-220ENST00000513578 TINF2Q9BSI4 451 aa9.1□□□□□ -0.95
RNF4-220ENST00000513578 NFKBIZQ9BYH8 718 aa9.1□□□□□ -0.95
RNF4-220ENST00000513578 CCDC113Q9H0I3 377 aa9.1□□□□□ -0.95
RNF4-220ENST00000513578 C2orf40Q9H1Z8 148 aa9.1□□□□□ -0.95
RNF4-220ENST00000513578 DEF6Q9H4E7 631 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms