RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 NR5A1Q13285 461 aa10.99□□□□□ -0.65
CCL28-203ENST00000513525 EPHA7Q15375 998 aa10.99□□□□□ -0.65
CCL28-203ENST00000513525 CCDC183Q5T5S1 534 aa10.99□□□□□ -0.65
CCL28-203ENST00000513525 LRSAM1Q6UWE0 723 aa10.99□□□□□ -0.65
CCL28-203ENST00000513525 ECHDC2Q86YB7 292 aa10.99□□□□□ -0.65
CCL28-203ENST00000513525 C4orf19Q8IY42 314 aa10.99□□□□□ -0.65
CCL28-203ENST00000513525 EXOC8Q8IYI6 725 aa10.99□□□□□ -0.65
CCL28-203ENST00000513525 COLGALT1Q8NBJ5 622 aa10.99□□□□□ -0.65
CCL28-203ENST00000513525 RSPH1Q8WYR4 309 aa10.99□□□□□ -0.65
CCL28-203ENST00000513525 ZNF668Q96K58 619 aaPredicted RBP10.99□□□□□ -0.65
CCL28-203ENST00000513525 SCLT1Q96NL6 688 aa10.99□□□□□ -0.65
CCL28-203ENST00000513525 CASD1Q96PB1 797 aa10.99□□□□□ -0.65
CCL28-203ENST00000513525 GCOM2Q9BZD3 368 aaPredicted RBP10.99□□□□□ -0.65
CCL28-203ENST00000513525 INO80BQ9C086 356 aaPredicted RBP10.99□□□□□ -0.65
CCL28-203ENST00000513525 CD320Q9NPF0 282 aa10.99□□□□□ -0.65
CCL28-203ENST00000513525 CHST12Q9NRB3 414 aa10.99□□□□□ -0.65
CCL28-203ENST00000513525 TYW1Q9NV66 732 aaKnown RBP10.99□□□□□ -0.65
CCL28-203ENST00000513525 DACT1Q9NYF0 836 aa10.99□□□□□ -0.65
CCL28-203ENST00000513525 KIAA1468Q9P260 1216 aa10.99□□□□□ -0.65
CCL28-203ENST00000513525 PRKAG3Q9UGI9 489 aa10.99□□□□□ -0.65
CCL28-203ENST00000513525 CFAP45Q9UL16 551 aa10.99□□□□□ -0.65
CCL28-203ENST00000513525 MYH11P35749 1972 aa10.98□□□□□ -0.65
CCL28-203ENST00000513525 A0A087WZ62 844 aa10.98□□□□□ -0.65
CCL28-203ENST00000513525 DTNBO60941 627 aa10.98□□□□□ -0.65
CCL28-203ENST00000513525 TBX10O75333 385 aa10.98□□□□□ -0.65
CCL28-203ENST00000513525 FGF18O76093 207 aa10.98□□□□□ -0.65
CCL28-203ENST00000513525 IBSPP21815 317 aaPredicted RBP10.98□□□□□ -0.65
CCL28-203ENST00000513525 SFPQP23246 707 aaKnown RBP eCLIP10.98□□□□□ -0.65
CCL28-203ENST00000513525 IRS1P35568 1242 aa10.98□□□□□ -0.65
CCL28-203ENST00000513525 DLX2Q07687 328 aaPredicted RBP10.98□□□□□ -0.65
CCL28-203ENST00000513525 ADAM15Q13444 863 aa10.98□□□□□ -0.65
CCL28-203ENST00000513525 SPOUT1Q5T280 376 aaKnown RBP10.98□□□□□ -0.65
CCL28-203ENST00000513525 PDE12Q6L8Q7 609 aaKnown RBP10.98□□□□□ -0.65
CCL28-203ENST00000513525 ADGRD2Q7Z7M1 963 aa10.98□□□□□ -0.65
CCL28-203ENST00000513525 ZNF598Q86UK7 904 aaKnown RBP10.98□□□□□ -0.65
CCL28-203ENST00000513525 FERMT3Q86UX7 667 aa10.98□□□□□ -0.65
CCL28-203ENST00000513525 LRRC43Q8N309 656 aa10.98□□□□□ -0.65
CCL28-203ENST00000513525 SH2D3AQ9BRG2 576 aa10.98□□□□□ -0.65
CCL28-203ENST00000513525 FDXACB1Q9BRP7 624 aaPredicted RBP10.98□□□□□ -0.65
CCL28-203ENST00000513525 LXNQ9BS40 222 aa10.98□□□□□ -0.65
CCL28-203ENST00000513525 DHX33Q9H6R0 707 aaKnown RBP10.98□□□□□ -0.65
CCL28-203ENST00000513525 TLR9Q9NR96 1032 aa10.98□□□□□ -0.65
CCL28-203ENST00000513525 SUCLA2Q9P2R7 463 aaPredicted RBP10.98□□□□□ -0.65
CCL28-203ENST00000513525 WRAP73Q9P2S5 460 aaPredicted RBP10.98□□□□□ -0.65
CCL28-203ENST00000513525 LZTS1Q9Y250 596 aa10.98□□□□□ -0.65
CCL28-203ENST00000513525 MTCL1Q9Y4B5 1905 aaKnown RBP10.98□□□□□ -0.65
CCL28-203ENST00000513525 TRIP11Q15643 1979 aa10.97□□□□□ -0.65
CCL28-203ENST00000513525 MBTPS2O43462 519 aa10.97□□□□□ -0.65
CCL28-203ENST00000513525 GAS2O43903 313 aaKnown RBP10.97□□□□□ -0.65
CCL28-203ENST00000513525 ATF7P17544 494 aaPredicted RBP10.97□□□□□ -0.65
CCL28-203ENST00000513525 FGFR4P22455 802 aa10.97□□□□□ -0.65
CCL28-203ENST00000513525 GTF2F1P35269 517 aaKnown RBP eCLIP10.97□□□□□ -0.65
CCL28-203ENST00000513525 RFC5P40937 340 aa10.97□□□□□ -0.65
CCL28-203ENST00000513525 PLCB3Q01970 1234 aa10.97□□□□□ -0.65
CCL28-203ENST00000513525 SMAD2Q15796 467 aaKnown RBP10.97□□□□□ -0.65
CCL28-203ENST00000513525 CLLU1OSQ5K130 101 aa10.97□□□□□ -0.65
CCL28-203ENST00000513525 PLA2G4FQ68DD2 849 aa10.97□□□□□ -0.65
CCL28-203ENST00000513525 LRRC55Q6ZSA7 311 aa10.97□□□□□ -0.65
CCL28-203ENST00000513525 EP400NLQ6ZTU2 488 aa10.97□□□□□ -0.65
CCL28-203ENST00000513525 RHPN2Q8IUC4 686 aa10.97□□□□□ -0.65
CCL28-203ENST00000513525 ABI1Q8IZP0 508 aa10.97□□□□□ -0.65
CCL28-203ENST00000513525 GJD3Q8N144 294 aa10.97□□□□□ -0.65
CCL28-203ENST00000513525 EFHBQ8N7U6 833 aa10.97□□□□□ -0.65
CCL28-203ENST00000513525 SLC7A3Q8WY07 619 aa10.97□□□□□ -0.65
CCL28-203ENST00000513525 MSLNLQ96KJ4 702 aa10.97□□□□□ -0.65
CCL28-203ENST00000513525 ZNF396Q96N95 335 aaPredicted RBP10.97□□□□□ -0.65
CCL28-203ENST00000513525 EPHX3Q9H6B9 360 aa10.97□□□□□ -0.65
CCL28-203ENST00000513525 TSR3Q9UJK0 312 aaKnown RBP10.97□□□□□ -0.65
CCL28-203ENST00000513525 TRIOO75962 3097 aa10.96□□□□□ -0.65
CCL28-203ENST00000513525 DENND4AQ7Z401 1863 aa10.96□□□□□ -0.65
CCL28-203ENST00000513525 BTBD18B2RXH4 712 aa10.96□□□□□ -0.65
CCL28-203ENST00000513525 PI4K2BG5E9Z4 385 aa10.96□□□□□ -0.65
CCL28-203ENST00000513525 FSCN2O14926 492 aa10.96□□□□□ -0.65
CCL28-203ENST00000513525 LINC01565O15544 149 aa10.96□□□□□ -0.65
CCL28-203ENST00000513525 MARCH6O60337 910 aa10.96□□□□□ -0.65
CCL28-203ENST00000513525 CSDE1O75534 798 aaKnown RBP10.96□□□□□ -0.65
CCL28-203ENST00000513525 EYA4O95677 639 aa10.96□□□□□ -0.65
CCL28-203ENST00000513525 YWHABP31946 246 aaKnown RBP10.96□□□□□ -0.65
CCL28-203ENST00000513525 PPM1AP35813 382 aa10.96□□□□□ -0.65
CCL28-203ENST00000513525 PHKA2P46019 1235 aa10.96□□□□□ -0.65
CCL28-203ENST00000513525 POLGP54098 1239 aaPredicted RBP10.96□□□□□ -0.65
CCL28-203ENST00000513525 NPEPPSP55786 919 aa10.96□□□□□ -0.65
CCL28-203ENST00000513525 ZP2Q05996 745 aa10.96□□□□□ -0.65
CCL28-203ENST00000513525 SMAD4Q13485 552 aaKnown RBP10.96□□□□□ -0.65
CCL28-203ENST00000513525 TRIM29Q14134 588 aa10.96□□□□□ -0.65
CCL28-203ENST00000513525 NCAPH2Q6IBW4 605 aa10.96□□□□□ -0.65
CCL28-203ENST00000513525 KCNT2Q6UVM3 1135 aa10.96□□□□□ -0.65
CCL28-203ENST00000513525 OTUD6AQ7L8S5 288 aa10.96□□□□□ -0.65
CCL28-203ENST00000513525 DIS3L2Q8IYB7 885 aaKnown RBP10.96□□□□□ -0.65
CCL28-203ENST00000513525 THNSL1Q8IYQ7 743 aa10.96□□□□□ -0.65
CCL28-203ENST00000513525 LEO1Q8WVC0 666 aaPredicted RBP10.96□□□□□ -0.65
CCL28-203ENST00000513525 MRPS27Q92552 414 aaKnown RBP10.96□□□□□ -0.65
CCL28-203ENST00000513525 C8orf76Q96K31 380 aa10.96□□□□□ -0.65
CCL28-203ENST00000513525 CEP170P1Q96L14 293 aa10.96□□□□□ -0.65
CCL28-203ENST00000513525 SPATA32Q96LK8 384 aa10.96□□□□□ -0.65
CCL28-203ENST00000513525 MRPL9Q9BYD2 267 aaKnown RBP10.96□□□□□ -0.65
CCL28-203ENST00000513525 IGFLR1Q9H665 355 aa10.96□□□□□ -0.65
CCL28-203ENST00000513525 ZSWIM4Q9H7M6 989 aa10.96□□□□□ -0.65
CCL28-203ENST00000513525 IFT122Q9HBG6 1241 aa10.96□□□□□ -0.65
CCL28-203ENST00000513525 RGL1Q9NZL6 768 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms