RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 MAP2K6P52564 334 aa6.8□□□□□ -1.32
HMGB1P47-201ENST00000511281 HK3P52790 923 aa6.8□□□□□ -1.32
HMGB1P47-201ENST00000511281 LONRF1Q17RB8 773 aa6.8□□□□□ -1.32
HMGB1P47-201ENST00000511281 TMEM95Q3KNT9 176 aa6.8□□□□□ -1.32
HMGB1P47-201ENST00000511281 INO80DQ53TQ3 878 aaPredicted RBP6.8□□□□□ -1.32
HMGB1P47-201ENST00000511281 FYB2Q5VWT5 728 aa6.8□□□□□ -1.32
HMGB1P47-201ENST00000511281 FAM180AQ6UWF9 173 aa6.8□□□□□ -1.32
HMGB1P47-201ENST00000511281 CD300LDQ6UXZ3 194 aa6.8□□□□□ -1.32
HMGB1P47-201ENST00000511281 KLHDC4Q8TBB5 520 aa6.8□□□□□ -1.32
HMGB1P47-201ENST00000511281 LRTOMTQ8WZ04 291 aa6.8□□□□□ -1.32
HMGB1P47-201ENST00000511281 RGMAQ96B86 450 aa6.8□□□□□ -1.32
HMGB1P47-201ENST00000511281 ZC3H10Q96K80 434 aaKnown RBP6.8□□□□□ -1.32
HMGB1P47-201ENST00000511281 SGCZQ96LD1 299 aa6.8□□□□□ -1.32
HMGB1P47-201ENST00000511281 WRNIP1Q96S55 665 aa6.8□□□□□ -1.32
HMGB1P47-201ENST00000511281 SELENOOQ9BVL4 669 aa6.8□□□□□ -1.32
HMGB1P47-201ENST00000511281 ZNF552Q9H707 407 aaPredicted RBP6.8□□□□□ -1.32
HMGB1P47-201ENST00000511281 DMRT3Q9NQL9 472 aa6.8□□□□□ -1.32
HMGB1P47-201ENST00000511281 POLR3BQ9NW08 1133 aaPredicted RBP6.8□□□□□ -1.32
HMGB1P47-201ENST00000511281 FBXO10Q9UK96 956 aa6.8□□□□□ -1.32
HMGB1P47-201ENST00000511281 POLHQ9Y253 713 aa6.8□□□□□ -1.32
HMGB1P47-201ENST00000511281 PCDHB1Q9Y5F3 818 aa6.8□□□□□ -1.32
HMGB1P47-201ENST00000511281 RASA4BC9J798 803 aa6.79□□□□□ -1.32
HMGB1P47-201ENST00000511281 RASA4O43374 803 aa6.79□□□□□ -1.32
HMGB1P47-201ENST00000511281 PQBP1O60828 265 aaKnown RBP6.79□□□□□ -1.32
HMGB1P47-201ENST00000511281 SETSIPP0DME0 302 aa6.79□□□□□ -1.32
HMGB1P47-201ENST00000511281 ZNF200P98182 395 aaPredicted RBP6.79□□□□□ -1.32
HMGB1P47-201ENST00000511281 CD83Q01151 205 aa6.79□□□□□ -1.32
HMGB1P47-201ENST00000511281 IFIT5Q13325 482 aaKnown RBP6.79□□□□□ -1.32
HMGB1P47-201ENST00000511281 IL10RAQ13651 578 aa6.79□□□□□ -1.32
HMGB1P47-201ENST00000511281 SEPT2Q15019 361 aa6.79□□□□□ -1.32
HMGB1P47-201ENST00000511281 MAN2A1Q16706 1144 aa6.79□□□□□ -1.32
HMGB1P47-201ENST00000511281 C19orf54Q5BKX5 351 aa6.79□□□□□ -1.32
HMGB1P47-201ENST00000511281 GRAMD4Q6IC98 578 aa6.79□□□□□ -1.32
HMGB1P47-201ENST00000511281 XRRA1Q6P2D8 792 aa6.79□□□□□ -1.32
HMGB1P47-201ENST00000511281 LMBR1LQ6UX01 489 aa6.79□□□□□ -1.32
HMGB1P47-201ENST00000511281 TMC5Q6UXY8 1006 aa6.79□□□□□ -1.32
HMGB1P47-201ENST00000511281 DAAM2Q86T65 1068 aa6.79□□□□□ -1.32
HMGB1P47-201ENST00000511281 DPP9Q86TI2 863 aa6.79□□□□□ -1.32
HMGB1P47-201ENST00000511281 ATG4DQ86TL0 474 aaPredicted RBP6.79□□□□□ -1.32
HMGB1P47-201ENST00000511281 UNC5BQ8IZJ1 945 aa6.79□□□□□ -1.32
HMGB1P47-201ENST00000511281 WDR48Q8TAF3 677 aa6.79□□□□□ -1.32
HMGB1P47-201ENST00000511281 DEPTORQ8TB45 409 aa6.79□□□□□ -1.32
HMGB1P47-201ENST00000511281 PARD3BQ8TEW8 1205 aa6.79□□□□□ -1.32
HMGB1P47-201ENST00000511281 RIN2Q8WYP3 895 aaPredicted RBP6.79□□□□□ -1.32
HMGB1P47-201ENST00000511281 NKD2Q969F2 451 aaPredicted RBP6.79□□□□□ -1.32
HMGB1P47-201ENST00000511281 DYDC2Q96IM9 177 aa6.79□□□□□ -1.32
HMGB1P47-201ENST00000511281 FAM167AQ96KS9 214 aa6.79□□□□□ -1.32
HMGB1P47-201ENST00000511281 EPB41L4AQ9HCS5 686 aaPredicted RBP6.79□□□□□ -1.32
HMGB1P47-201ENST00000511281 DCP1AQ9NPI6 582 aaPredicted RBP6.79□□□□□ -1.32
HMGB1P47-201ENST00000511281 ZFP69BQ9UJL9 534 aa6.79□□□□□ -1.32
HMGB1P47-201ENST00000511281 DMTF1Q9Y222 760 aa6.79□□□□□ -1.32
HMGB1P47-201ENST00000511281 RPTORQ8N122 1335 aa6.78□□□□□ -1.32
HMGB1P47-201ENST00000511281 PHF2O75151 1096 aa6.78□□□□□ -1.32
HMGB1P47-201ENST00000511281 ENDOD1O94919 500 aa6.78□□□□□ -1.32
HMGB1P47-201ENST00000511281 CYP2C8P10632 490 aa6.78□□□□□ -1.32
HMGB1P47-201ENST00000511281 CTSSP25774 331 aa6.78□□□□□ -1.32
HMGB1P47-201ENST00000511281 VIPR1P32241 457 aa6.78□□□□□ -1.32
HMGB1P47-201ENST00000511281 ITGA1P56199 1179 aa6.78□□□□□ -1.32
HMGB1P47-201ENST00000511281 ANTXR2P58335 489 aa6.78□□□□□ -1.32
HMGB1P47-201ENST00000511281 RAB1AP62820 205 aa6.78□□□□□ -1.32
HMGB1P47-201ENST00000511281 NKX6-1P78426 367 aaPredicted RBP6.78□□□□□ -1.32
HMGB1P47-201ENST00000511281 CDC42EP1Q00587 391 aa6.78□□□□□ -1.32
HMGB1P47-201ENST00000511281 BTKQ06187 659 aa6.78□□□□□ -1.32
HMGB1P47-201ENST00000511281 ADAM9Q13443 819 aa6.78□□□□□ -1.32
HMGB1P47-201ENST00000511281 TARBP2Q15633 366 aaKnown RBP6.78□□□□□ -1.32
HMGB1P47-201ENST00000511281 MST1LQ2TV78 715 aa6.78□□□□□ -1.32
HMGB1P47-201ENST00000511281 CBLL1Q75N03 491 aa6.78□□□□□ -1.32
HMGB1P47-201ENST00000511281 TMC6Q7Z403 805 aa6.78□□□□□ -1.32
HMGB1P47-201ENST00000511281 B3GNT8Q7Z7M8 397 aa6.78□□□□□ -1.32
HMGB1P47-201ENST00000511281 DPF2Q92785 391 aa6.78□□□□□ -1.32
HMGB1P47-201ENST00000511281 EVI5LQ96CN4 794 aa6.78□□□□□ -1.32
HMGB1P47-201ENST00000511281 SAMD11Q96NU1 681 aa6.78□□□□□ -1.32
HMGB1P47-201ENST00000511281 DMRTA2Q96SC8 542 aa6.78□□□□□ -1.32
HMGB1P47-201ENST00000511281 C7orf25Q9BPX7 421 aa6.78□□□□□ -1.32
HMGB1P47-201ENST00000511281 C22orf23Q9BZE7 217 aa6.78□□□□□ -1.32
HMGB1P47-201ENST00000511281 PCDHGB6Q9Y5F9 930 aa6.78□□□□□ -1.32
HMGB1P47-201ENST00000511281 NR2E3Q9Y5X4 410 aa6.78□□□□□ -1.32
HMGB1P47-201ENST00000511281 FOXN3O00409 490 aaPredicted RBP6.77□□□□□ -1.33
HMGB1P47-201ENST00000511281 MGEA5O60502 916 aa6.77□□□□□ -1.33
HMGB1P47-201ENST00000511281 ARIH2O95376 493 aa6.77□□□□□ -1.33
HMGB1P47-201ENST00000511281 LY86O95711 162 aa6.77□□□□□ -1.33
HMGB1P47-201ENST00000511281 FGAP02671 866 aa6.77□□□□□ -1.33
HMGB1P47-201ENST00000511281 FTLP02792 175 aaPredicted RBP6.77□□□□□ -1.33
HMGB1P47-201ENST00000511281 GLI1P08151 1106 aa6.77□□□□□ -1.33
HMGB1P47-201ENST00000511281 LTA4HP09960 611 aaKnown RBP6.77□□□□□ -1.33
HMGB1P47-201ENST00000511281 MYF5P13349 255 aa6.77□□□□□ -1.33
HMGB1P47-201ENST00000511281 TYRP1P17643 537 aa6.77□□□□□ -1.33
HMGB1P47-201ENST00000511281 PDE6BP35913 854 aa6.77□□□□□ -1.33
HMGB1P47-201ENST00000511281 CASP5P51878 434 aa6.77□□□□□ -1.33
HMGB1P47-201ENST00000511281 MGAT5Q09328 741 aa6.77□□□□□ -1.33
HMGB1P47-201ENST00000511281 NOGQ13253 232 aa6.77□□□□□ -1.33
HMGB1P47-201ENST00000511281 HSP90AB4PQ58FF6 505 aa6.77□□□□□ -1.33
HMGB1P47-201ENST00000511281 APOA5Q6Q788 366 aa6.77□□□□□ -1.33
HMGB1P47-201ENST00000511281 DRC7Q8IY82 874 aa6.77□□□□□ -1.33
HMGB1P47-201ENST00000511281 PLBD2Q8NHP8 589 aa6.77□□□□□ -1.33
HMGB1P47-201ENST00000511281 ANKS1AQ92625 1134 aa6.77□□□□□ -1.33
HMGB1P47-201ENST00000511281 KAT5Q92993 513 aa6.77□□□□□ -1.33
HMGB1P47-201ENST00000511281 PHKBQ93100 1093 aa6.77□□□□□ -1.33
HMGB1P47-201ENST00000511281 APIPQ96GX9 242 aa6.77□□□□□ -1.33
HMGB1P47-201ENST00000511281 MRGPRX4Q96LA9 322 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms