RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 GLRX3O76003 335 aaKnown RBP9.61□□□□□ -0.87
USP53-206ENST00000510737 SCNN1GP51170 649 aa9.61□□□□□ -0.87
USP53-206ENST00000510737 SLC6A3Q01959 620 aa9.61□□□□□ -0.87
USP53-206ENST00000510737 C2orf27AQ580R0 203 aa9.61□□□□□ -0.87
USP53-206ENST00000510737 OR5AN1Q8NGI8 311 aa9.61□□□□□ -0.87
USP53-206ENST00000510737 ZNF483Q8TF39 744 aaPredicted RBP9.61□□□□□ -0.87
USP53-206ENST00000510737 AURKAIP1Q9NWT8 199 aaPredicted RBP9.61□□□□□ -0.87
USP53-206ENST00000510737 RTEL1-TNFRSF6BF6WH68 1400 aa9.61□□□□□ -0.87
USP53-206ENST00000510737 MSH6P52701 1360 aa9.61□□□□□ -0.87
USP53-206ENST00000510737 PLEKHH2Q8IVE3 1493 aa9.6□□□□□ -0.87
USP53-206ENST00000510737 MBD5Q9P267 1494 aa9.6□□□□□ -0.87
USP53-206ENST00000510737 DIP2AQ14689 1571 aa9.6□□□□□ -0.87
USP53-206ENST00000510737 M0R2C6 588 aa9.6□□□□□ -0.87
USP53-206ENST00000510737 MAP3K12Q12852 859 aa9.6□□□□□ -0.87
USP53-206ENST00000510737 PCSK4Q6UW60 755 aa9.6□□□□□ -0.87
USP53-206ENST00000510737 Q6ZPA2 131 aa9.6□□□□□ -0.87
USP53-206ENST00000510737 RPL10LQ96L21 214 aaKnown RBP9.6□□□□□ -0.87
USP53-206ENST00000510737 MPHOSPH9Q99550 1183 aa9.6□□□□□ -0.87
USP53-206ENST00000510737 SLC6A15Q9H2J7 730 aa9.6□□□□□ -0.87
USP53-206ENST00000510737 SAE1Q9UBE0 346 aaPredicted RBP9.6□□□□□ -0.87
USP53-206ENST00000510737 DENND2AQ9ULE3 1009 aa9.6□□□□□ -0.87
USP53-206ENST00000510737 RBM8AQ9Y5S9 174 aaKnown RBP9.6□□□□□ -0.87
USP53-206ENST00000510737 SLIT1O75093 1534 aa9.6□□□□□ -0.87
USP53-206ENST00000510737 AHDC1Q5TGY3 1603 aaPredicted RBP9.6□□□□□ -0.87
USP53-206ENST00000510737 NWD1Q149M9 1564 aa9.59□□□□□ -0.87
USP53-206ENST00000510737 KIF11P52732 1056 aa9.59□□□□□ -0.87
USP53-206ENST00000510737 MKL1Q969V6 931 aa9.59□□□□□ -0.87
USP53-206ENST00000510737 SLC7A6OSQ96CW6 309 aaPredicted RBP9.59□□□□□ -0.87
USP53-206ENST00000510737 PRDM15P57071 1507 aaPredicted RBP9.59□□□□□ -0.87
USP53-206ENST00000510737 CCDC163A0A0D9SF12 145 aa9.58□□□□□ -0.88
USP53-206ENST00000510737 TRAF5O00463 557 aa9.58□□□□□ -0.88
USP53-206ENST00000510737 KRT4P19013 534 aa9.58□□□□□ -0.88
USP53-206ENST00000510737 FNTBP49356 437 aa9.58□□□□□ -0.88
USP53-206ENST00000510737 SMN1Q16637 294 aaKnown RBP9.58□□□□□ -0.88
USP53-206ENST00000510737 ZCCHC8Q6NZY4 707 aaKnown RBP9.58□□□□□ -0.88
USP53-206ENST00000510737 GAREM2Q75VX8 874 aa9.58□□□□□ -0.88
USP53-206ENST00000510737 ANKRD53Q8N9V6 530 aa9.58□□□□□ -0.88
USP53-206ENST00000510737 CLIP3Q96DZ5 547 aa9.58□□□□□ -0.88
USP53-206ENST00000510737 NHSL1Q5SYE7 1610 aa9.57□□□□□ -0.88
USP53-206ENST00000510737 INHBCP55103 352 aa9.57□□□□□ -0.88
USP53-206ENST00000510737 BPIFB4P59827 614 aa9.57□□□□□ -0.88
USP53-206ENST00000510737 KRTAP15-1Q3LI76 137 aa9.57□□□□□ -0.88
USP53-206ENST00000510737 LPPQ93052 612 aa9.57□□□□□ -0.88
USP53-206ENST00000510737 MAML3Q96JK9 1138 aa9.57□□□□□ -0.88
USP53-206ENST00000510737 SAMD15Q9P1V8 674 aa9.57□□□□□ -0.88
USP53-206ENST00000510737 EP400Q96L91 3159 aa9.57□□□□□ -0.88
USP53-206ENST00000510737 TMEM2Q9UHN6 1383 aa9.57□□□□□ -0.88
USP53-206ENST00000510737 NKTRP30414 1462 aaKnown RBP9.57□□□□□ -0.88
USP53-206ENST00000510737 ERVK-7P63135 1459 aa9.57□□□□□ -0.88
USP53-206ENST00000510737 KDM5AP29375 1690 aaKnown RBP9.56□□□□□ -0.88
USP53-206ENST00000510737 CCNB3Q8WWL7 1395 aa9.56□□□□□ -0.88
USP53-206ENST00000510737 A0A087X1B8 175 aa9.56□□□□□ -0.88
USP53-206ENST00000510737 H2AFYO75367 372 aaKnown RBP9.56□□□□□ -0.88
USP53-206ENST00000510737 ADH4P08319 380 aa9.56□□□□□ -0.88
USP53-206ENST00000510737 PTX3P26022 381 aaPredicted RBP9.56□□□□□ -0.88
USP53-206ENST00000510737 CRHR2Q13324 411 aa9.56□□□□□ -0.88
USP53-206ENST00000510737 TCIRG1Q13488 830 aa9.56□□□□□ -0.88
USP53-206ENST00000510737 SLFN12LQ6IEE8 588 aa9.56□□□□□ -0.88
USP53-206ENST00000510737 C16orf92Q96LL3 132 aa9.56□□□□□ -0.88
USP53-206ENST00000510737 ABCC3O15438 1527 aa9.56□□□□□ -0.88
USP53-206ENST00000510737 CASKIN1Q8WXD9 1431 aa9.56□□□□□ -0.88
USP53-206ENST00000510737 TET3O43151 1660 aa9.55□□□□□ -0.88
USP53-206ENST00000510737 PLD2O14939 933 aa9.55□□□□□ -0.88
USP53-206ENST00000510737 CYP27B1O15528 508 aa9.55□□□□□ -0.88
USP53-206ENST00000510737 APPP05067 770 aa9.55□□□□□ -0.88
USP53-206ENST00000510737 MAKP20794 623 aa9.55□□□□□ -0.88
USP53-206ENST00000510737 INHBEP58166 350 aa9.55□□□□□ -0.88
USP53-206ENST00000510737 ROM1Q03395 351 aa9.55□□□□□ -0.88
USP53-206ENST00000510737 ZNF460Q14592 562 aa9.55□□□□□ -0.88
USP53-206ENST00000510737 CLEC14AQ86T13 490 aa9.55□□□□□ -0.88
USP53-206ENST00000510737 CHST14Q8NCH0 376 aa9.55□□□□□ -0.88
USP53-206ENST00000510737 PMFBP1Q8TBY8 1022 aa9.55□□□□□ -0.88
USP53-206ENST00000510737 GCDHQ92947 438 aaPredicted RBP9.55□□□□□ -0.88
USP53-206ENST00000510737 GFM2Q969S9 779 aaKnown RBP9.55□□□□□ -0.88
USP53-206ENST00000510737 PARPBPQ9NWS1 579 aa9.55□□□□□ -0.88
USP53-206ENST00000510737 GPRC5BQ9NZH0 403 aa9.55□□□□□ -0.88
USP53-206ENST00000510737 CCDC18Q5T9S5 1454 aa9.54□□□□□ -0.88
USP53-206ENST00000510737 UBE2QL1A1L167 161 aa9.54□□□□□ -0.88
USP53-206ENST00000510737 DNAJC8O75937 253 aaPredicted RBP9.54□□□□□ -0.88
USP53-206ENST00000510737 SESN2P58004 480 aaPredicted RBP9.54□□□□□ -0.88
USP53-206ENST00000510737 PURAQ00577 322 aaKnown RBP9.54□□□□□ -0.88
USP53-206ENST00000510737 MYBPC3Q14896 1274 aa9.54□□□□□ -0.88
USP53-206ENST00000510737 DGKDQ16760 1214 aa9.54□□□□□ -0.88
USP53-206ENST00000510737 ARHGAP44Q17R89 818 aa9.54□□□□□ -0.88
USP53-206ENST00000510737 MIEF2Q96C03 454 aa9.54□□□□□ -0.88
USP53-206ENST00000510737 AGAP2Q99490 1192 aa9.54□□□□□ -0.88
USP53-206ENST00000510737 HAPLN2Q9GZV7 340 aa9.54□□□□□ -0.88
USP53-206ENST00000510737 REXO2Q9Y3B8 237 aaKnown RBP9.54□□□□□ -0.88
USP53-206ENST00000510737 EEA1Q15075 1411 aa9.54□□□□□ -0.88
USP53-206ENST00000510737 MAST1Q9Y2H9 1570 aa9.54□□□□□ -0.88
USP53-206ENST00000510737 CAMSAP2Q08AD1 1489 aa9.53□□□□□ -0.88
USP53-206ENST00000510737 UBA6A0AVT1 1052 aaPredicted RBP9.53□□□□□ -0.88
USP53-206ENST00000510737 TOB2Q14106 344 aaPredicted RBP9.53□□□□□ -0.88
USP53-206ENST00000510737 FAM111BQ6SJ93 734 aa9.53□□□□□ -0.88
USP53-206ENST00000510737 BRINP3Q76B58 766 aa9.53□□□□□ -0.88
USP53-206ENST00000510737 DDX53Q86TM3 631 aaKnown RBP9.53□□□□□ -0.88
USP53-206ENST00000510737 ANKRD35Q8N283 1001 aa9.53□□□□□ -0.88
USP53-206ENST00000510737 TNPO3Q9Y5L0 923 aaKnown RBP9.53□□□□□ -0.88
USP53-206ENST00000510737 PTPDC1A2A3K4 754 aa9.52□□□□□ -0.89
USP53-206ENST00000510737 CREB3L3Q68CJ9 461 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms