RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 PIN4Q9Y237 131 aaKnown RBP16.31■□□□□ 0.2
RNF4-213ENST00000509388 H0YGN5 161 aa16.3■□□□□ 0.2
RNF4-213ENST00000509388 RHOBTB3O94955 611 aa16.3■□□□□ 0.2
RNF4-213ENST00000509388 MYBP10242 640 aa16.3■□□□□ 0.2
RNF4-213ENST00000509388 MAGEA10P43363 369 aaPredicted RBP16.3■□□□□ 0.2
RNF4-213ENST00000509388 GTF2BQ00403 316 aa16.3■□□□□ 0.2
RNF4-213ENST00000509388 FAM187BQ17R55 369 aa16.3■□□□□ 0.2
RNF4-213ENST00000509388 ZC2HC1CQ53FD0 456 aaPredicted RBP16.3■□□□□ 0.2
RNF4-213ENST00000509388 CCDC183Q5T5S1 534 aa16.3■□□□□ 0.2
RNF4-213ENST00000509388 L1TD1Q5T7N2 865 aaKnown RBP16.3■□□□□ 0.2
RNF4-213ENST00000509388 PPP4R3CPQ6ZMV5 832 aa16.3■□□□□ 0.2
RNF4-213ENST00000509388 APBB1IPQ7Z5R6 666 aaPredicted RBP16.3■□□□□ 0.2
RNF4-213ENST00000509388 SYCP3Q8IZU3 236 aa16.3■□□□□ 0.2
RNF4-213ENST00000509388 ACCSQ96QU6 501 aa16.3■□□□□ 0.2
RNF4-213ENST00000509388 TCHPQ9BT92 498 aa16.3■□□□□ 0.2
RNF4-213ENST00000509388 OSBPL7Q9BZF2 842 aa16.3■□□□□ 0.2
RNF4-213ENST00000509388 TMEM206Q9H813 350 aa16.3■□□□□ 0.2
RNF4-213ENST00000509388 KIAA1468Q9P260 1216 aa16.3■□□□□ 0.2
RNF4-213ENST00000509388 EVPLQ92817 2033 aa16.29■□□□□ 0.2
RNF4-213ENST00000509388 TSPAN1O60635 241 aa16.29■□□□□ 0.2
RNF4-213ENST00000509388 EFCAB14O75071 495 aa16.29■□□□□ 0.2
RNF4-213ENST00000509388 PRPF6O94906 941 aaKnown RBP16.29■□□□□ 0.2
RNF4-213ENST00000509388 LIG4P49917 911 aa16.29■□□□□ 0.2
RNF4-213ENST00000509388 EHHADHQ08426 723 aa16.29■□□□□ 0.2
RNF4-213ENST00000509388 STK4Q13043 487 aa16.29■□□□□ 0.2
RNF4-213ENST00000509388 KLHL40Q2TBA0 621 aa16.29■□□□□ 0.2
RNF4-213ENST00000509388 ISM2Q6H9L7 571 aa16.29■□□□□ 0.2
RNF4-213ENST00000509388 TWF2Q6IBS0 349 aaKnown RBP16.29■□□□□ 0.2
RNF4-213ENST00000509388 CAVIN1Q6NZI2 390 aaKnown RBP16.29■□□□□ 0.2
RNF4-213ENST00000509388 NOTUMQ6P988 496 aa16.29■□□□□ 0.2
RNF4-213ENST00000509388 FIZ1Q96SL8 496 aa16.29■□□□□ 0.2
RNF4-213ENST00000509388 CCDC113Q9H0I3 377 aa16.29■□□□□ 0.2
RNF4-213ENST00000509388 MTIF3Q9H2K0 278 aaKnown RBP16.29■□□□□ 0.2
RNF4-213ENST00000509388 AGPAT5Q9NUQ2 364 aa16.29■□□□□ 0.2
RNF4-213ENST00000509388 CNTNAP2Q9UHC6 1331 aa16.28■□□□□ 0.2
RNF4-213ENST00000509388 ABHD14A-ACY1A0A1B0GW23 586 aa16.28■□□□□ 0.2
RNF4-213ENST00000509388 ZBBXA8MT70 800 aa16.28■□□□□ 0.2
RNF4-213ENST00000509388 BIN1O00499 593 aa16.28■□□□□ 0.2
RNF4-213ENST00000509388 HNRNPDLO14979 420 aaKnown RBP16.28■□□□□ 0.2
RNF4-213ENST00000509388 EIF3DO15371 548 aaKnown RBP eCLIP16.28■□□□□ 0.2
RNF4-213ENST00000509388 B4GALT5O43286 388 aa16.28■□□□□ 0.2
RNF4-213ENST00000509388 ARF4P18085 180 aaPredicted RBP16.28■□□□□ 0.2
RNF4-213ENST00000509388 IBSPP21815 317 aaPredicted RBP16.28■□□□□ 0.2
RNF4-213ENST00000509388 MATR3P43243 847 aaKnown RBP eCLIP16.28■□□□□ 0.2
RNF4-213ENST00000509388 SARSP49591 514 aaKnown RBP16.28■□□□□ 0.2
RNF4-213ENST00000509388 STIM1Q13586 685 aa16.28■□□□□ 0.2
RNF4-213ENST00000509388 ZNF658Q5TYW1 1059 aaPredicted RBP16.28■□□□□ 0.2
RNF4-213ENST00000509388 ATF7IP2Q5U623 682 aa16.28■□□□□ 0.2
RNF4-213ENST00000509388 ZNF365Q70YC5 407 aa16.28■□□□□ 0.2
RNF4-213ENST00000509388 OTOP2Q7RTS6 562 aa16.28■□□□□ 0.2
RNF4-213ENST00000509388 MYOCDQ8IZQ8 938 aa16.28■□□□□ 0.2
RNF4-213ENST00000509388 SPATA20Q8TB22 786 aa16.28■□□□□ 0.2
RNF4-213ENST00000509388 KCNN1Q92952 543 aa16.28■□□□□ 0.2
RNF4-213ENST00000509388 CCDC51Q96ER9 411 aa16.28■□□□□ 0.2
RNF4-213ENST00000509388 CPB2Q96IY4 423 aa16.28■□□□□ 0.2
RNF4-213ENST00000509388 ADAM2Q99965 735 aa16.28■□□□□ 0.2
RNF4-213ENST00000509388 ADPGKQ9BRR6 497 aa16.28■□□□□ 0.2
RNF4-213ENST00000509388 TARS2Q9BW92 718 aaKnown RBP16.28■□□□□ 0.2
RNF4-213ENST00000509388 TRIM6Q9C030 488 aaPredicted RBP16.28■□□□□ 0.2
RNF4-213ENST00000509388 UBE2OQ9C0C9 1292 aaKnown RBP16.28■□□□□ 0.2
RNF4-213ENST00000509388 MAN1B1Q9UKM7 699 aa16.28■□□□□ 0.2
RNF4-213ENST00000509388 N4BP3O15049 544 aa16.27■□□□□ 0.2
RNF4-213ENST00000509388 BAIAP3O94812 1187 aa16.27■□□□□ 0.2
RNF4-213ENST00000509388 KCNJ6P48051 423 aa16.27■□□□□ 0.2
RNF4-213ENST00000509388 CASP5P51878 434 aa16.27■□□□□ 0.2
RNF4-213ENST00000509388 AMHR2Q16671 573 aa16.27■□□□□ 0.2
RNF4-213ENST00000509388 NT5DC1Q5TFE4 455 aa16.27■□□□□ 0.2
RNF4-213ENST00000509388 ZPBP2Q6X784 338 aa16.27■□□□□ 0.2
RNF4-213ENST00000509388 TAS1R3Q7RTX0 852 aa16.27■□□□□ 0.2
RNF4-213ENST00000509388 MAP4K3Q8IVH8 894 aa16.27■□□□□ 0.2
RNF4-213ENST00000509388 NELFCDQ8IXH7 590 aa16.27■□□□□ 0.2
RNF4-213ENST00000509388 TRIML1Q8N9V2 468 aa16.27■□□□□ 0.2
RNF4-213ENST00000509388 ZNF507Q8TCN5 953 aa16.27■□□□□ 0.2
RNF4-213ENST00000509388 TMX1Q9H3N1 280 aa16.27■□□□□ 0.2
RNF4-213ENST00000509388 C1orf112Q9NSG2 853 aa16.27■□□□□ 0.2
RNF4-213ENST00000509388 RNF216Q9NWF9 866 aaPredicted RBP16.27■□□□□ 0.2
RNF4-213ENST00000509388 USP20Q9Y2K6 914 aa16.27■□□□□ 0.2
RNF4-213ENST00000509388 GDAQ9Y2T3 454 aa16.27■□□□□ 0.2
RNF4-213ENST00000509388 UBE4BO95155 1302 aa16.26■□□□□ 0.19
RNF4-213ENST00000509388 ALPK3Q96L96 1907 aa16.26■□□□□ 0.19
RNF4-213ENST00000509388 A0A1B0GUA9 196 aa16.26■□□□□ 0.19
RNF4-213ENST00000509388 ENPP3O14638 875 aa16.26■□□□□ 0.19
RNF4-213ENST00000509388 PPP1R37O75864 691 aa16.26■□□□□ 0.19
RNF4-213ENST00000509388 LETM1O95202 739 aaPredicted RBP16.26■□□□□ 0.19
RNF4-213ENST00000509388 SKIP12755 728 aa16.26■□□□□ 0.19
RNF4-213ENST00000509388 EPHB4P54760 987 aa16.26■□□□□ 0.19
RNF4-213ENST00000509388 TMEM240Q5SV17 173 aa16.26■□□□□ 0.19
RNF4-213ENST00000509388 SLC27A1Q6PCB7 646 aa16.26■□□□□ 0.19
RNF4-213ENST00000509388 SASS6Q6UVJ0 657 aa16.26■□□□□ 0.19
RNF4-213ENST00000509388 C16orf59Q7L2K0 433 aa16.26■□□□□ 0.19
RNF4-213ENST00000509388 KIAA0895Q8NCT3 520 aa16.26■□□□□ 0.19
RNF4-213ENST00000509388 GLIS3Q8NEA6 775 aa16.26■□□□□ 0.19
RNF4-213ENST00000509388 SCFD1Q8WVM8 642 aa16.26■□□□□ 0.19
RNF4-213ENST00000509388 ACO2Q99798 780 aaKnown RBP16.26■□□□□ 0.19
RNF4-213ENST00000509388 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.26■□□□□ 0.197e-7■■■□□ 16.9
RNF4-213ENST00000509388 STRA6Q9BX79 667 aa16.26■□□□□ 0.19
RNF4-213ENST00000509388 FGFBP2Q9BYJ0 223 aa16.26■□□□□ 0.19
RNF4-213ENST00000509388 RGS18Q9NS28 235 aa16.26■□□□□ 0.19
RNF4-213ENST00000509388 ANKFY1Q9P2R3 1169 aa16.26■□□□□ 0.19
RNF4-213ENST00000509388 MAPK8IP1Q9UQF2 711 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms