RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 ZSCAN31Q96LW9 406 aaPredicted RBP15.14■□□□□ 0.01
CCHCR1-227ENST00000508852 RIPOR3Q96MK2 946 aa15.14■□□□□ 0.01
CCHCR1-227ENST00000508852 RSAD1Q9HA92 442 aa15.14■□□□□ 0.01
CCHCR1-227ENST00000508852 GJB4Q9NTQ9 266 aa15.14■□□□□ 0.01
CCHCR1-227ENST00000508852 TBC1D13Q9NVG8 400 aa15.14■□□□□ 0.01
CCHCR1-227ENST00000508852 WRAP73Q9P2S5 460 aaPredicted RBP15.14■□□□□ 0.01
CCHCR1-227ENST00000508852 PCDHGC5Q9Y5F6 944 aa15.14■□□□□ 0.01
CCHCR1-227ENST00000508852 HIDE1A8MVS5 230 aa15.13■□□□□ 0.01
CCHCR1-227ENST00000508852 GALTP07902 379 aa15.13■□□□□ 0.01
CCHCR1-227ENST00000508852 CTSAP10619 480 aa15.13■□□□□ 0.01
CCHCR1-227ENST00000508852 TXKP42681 527 aa15.13■□□□□ 0.01
CCHCR1-227ENST00000508852 MTHFRP42898 656 aa15.13■□□□□ 0.01
CCHCR1-227ENST00000508852 PTENP60484 403 aa15.13■□□□□ 0.01
CCHCR1-227ENST00000508852 HMGN5P82970 282 aaKnown RBP15.13■□□□□ 0.01
CCHCR1-227ENST00000508852 EARS2Q5JPH6 523 aaKnown RBP15.13■□□□□ 0.01
CCHCR1-227ENST00000508852 ELMSAN1Q6PJG2 1045 aa15.13■□□□□ 0.01
CCHCR1-227ENST00000508852 BMP8AQ7Z5Y6 402 aa15.13■□□□□ 0.01
CCHCR1-227ENST00000508852 VPS52Q8N1B4 723 aa15.13■□□□□ 0.01
CCHCR1-227ENST00000508852 MCPH1Q8NEM0 835 aa15.13■□□□□ 0.01
CCHCR1-227ENST00000508852 ERMNQ8TAM6 284 aa15.13■□□□□ 0.01
CCHCR1-227ENST00000508852 PRRX2Q99811 253 aa15.13■□□□□ 0.01
CCHCR1-227ENST00000508852 EMILIN2Q9BXX0 1053 aa15.13■□□□□ 0.01
CCHCR1-227ENST00000508852 ZBP1Q9H171 429 aa15.13■□□□□ 0.01
CCHCR1-227ENST00000508852 S1PR5Q9H228 398 aa15.13■□□□□ 0.01
CCHCR1-227ENST00000508852 NRDE2Q9H7Z3 1164 aa15.13■□□□□ 0.01
CCHCR1-227ENST00000508852 TUFT1Q9NNX1 390 aa15.13■□□□□ 0.01
CCHCR1-227ENST00000508852 DPP7Q9UHL4 492 aa15.13■□□□□ 0.01
CCHCR1-227ENST00000508852 MUTYHQ9UIF7 546 aa15.13■□□□□ 0.01
CCHCR1-227ENST00000508852 INPP5FQ9Y2H2 1132 aa15.13■□□□□ 0.01
CCHCR1-227ENST00000508852 STK24Q9Y6E0 443 aa15.13■□□□□ 0.01
CCHCR1-227ENST00000508852 ZMYM2Q9UBW7 1377 aa15.12■□□□□ 0.01
CCHCR1-227ENST00000508852 C5orf42Q9H799 3197 aa15.12■□□□□ 0.01
CCHCR1-227ENST00000508852 CENPBP07199 599 aaPredicted RBP15.12■□□□□ 0.01
CCHCR1-227ENST00000508852 ITGA4P13612 1032 aa15.12■□□□□ 0.01
CCHCR1-227ENST00000508852 MUTP22033 750 aa15.12■□□□□ 0.01
CCHCR1-227ENST00000508852 CA8P35219 290 aa15.12■□□□□ 0.01
CCHCR1-227ENST00000508852 PBX3P40426 434 aa15.12■□□□□ 0.01
CCHCR1-227ENST00000508852 ZNF579Q8NAF0 562 aaKnown RBP15.12■□□□□ 0.01
CCHCR1-227ENST00000508852 VN1R2Q8NFZ6 395 aa15.12■□□□□ 0.01
CCHCR1-227ENST00000508852 LPPQ93052 612 aa15.12■□□□□ 0.01
CCHCR1-227ENST00000508852 C8orf76Q96K31 380 aa15.12■□□□□ 0.01
CCHCR1-227ENST00000508852 MTMR9Q96QG7 549 aa15.12■□□□□ 0.01
CCHCR1-227ENST00000508852 NACC1Q96RE7 527 aa15.12■□□□□ 0.01
CCHCR1-227ENST00000508852 TRIM6Q9C030 488 aaPredicted RBP15.12■□□□□ 0.01
CCHCR1-227ENST00000508852 ADAM7Q9H2U9 754 aa15.12■□□□□ 0.01
CCHCR1-227ENST00000508852 FOXP1Q9H334 677 aaPredicted RBP15.12■□□□□ 0.01
CCHCR1-227ENST00000508852 SH2B1Q9NRF2 756 aaPredicted RBP15.12■□□□□ 0.01
CCHCR1-227ENST00000508852 RAPGEFL1Q9UHV5 662 aa15.12■□□□□ 0.01
CCHCR1-227ENST00000508852 FAN1Q9Y2M0 1017 aa15.12■□□□□ 0.01
CCHCR1-227ENST00000508852 HCFC2Q9Y5Z7 792 aa15.12■□□□□ 0.01
CCHCR1-227ENST00000508852 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.11■□□□□ 0.01
CCHCR1-227ENST00000508852 INO80B-WBP1J3KQ70 363 aa15.11■□□□□ 0.01
CCHCR1-227ENST00000508852 INPPL1O15357 1258 aa15.11■□□□□ 0.01
CCHCR1-227ENST00000508852 CLASP2O75122 1294 aaKnown RBP15.11■□□□□ 0.01
CCHCR1-227ENST00000508852 HOXA11P31270 313 aaPredicted RBP15.11■□□□□ 0.01
CCHCR1-227ENST00000508852 TRAPPC10P48553 1259 aa15.11■□□□□ 0.01
CCHCR1-227ENST00000508852 RBM25P49756 843 aaKnown RBP15.11■□□□□ 0.01
CCHCR1-227ENST00000508852 RARRES1P49788 294 aa15.11■□□□□ 0.01
CCHCR1-227ENST00000508852 GNL2Q13823 731 aaKnown RBP15.11■□□□□ 0.01
CCHCR1-227ENST00000508852 LLGL2Q6P1M3 1020 aa15.11■□□□□ 0.01
CCHCR1-227ENST00000508852 AGMOQ6ZNB7 445 aa15.11■□□□□ 0.01
CCHCR1-227ENST00000508852 RPGRIP1Q96KN7 1286 aa15.11■□□□□ 0.01
CCHCR1-227ENST00000508852 PRIMPOLQ96LW4 560 aa15.11■□□□□ 0.01
CCHCR1-227ENST00000508852 POLR3CQ9BUI4 534 aaPredicted RBP15.11■□□□□ 0.01
CCHCR1-227ENST00000508852 CSRNP2Q9H175 543 aa15.11■□□□□ 0.01
CCHCR1-227ENST00000508852 DBR1Q9UK59 544 aaKnown RBP15.11■□□□□ 0.01
CCHCR1-227ENST00000508852 GIT1Q9Y2X7 761 aa15.11■□□□□ 0.01
CCHCR1-227ENST00000508852 NT5C1B-RDH14C9J2C7 533 aa15.1■□□□□ 0.01
CCHCR1-227ENST00000508852 LARGE1O95461 756 aa15.1■□□□□ 0.01
CCHCR1-227ENST00000508852 C1RP00736 705 aa15.1■□□□□ 0.01
CCHCR1-227ENST00000508852 ARL2P36404 184 aa15.1■□□□□ 0.01
CCHCR1-227ENST00000508852 ZXDAP98168 799 aa15.1■□□□□ 0.01
CCHCR1-227ENST00000508852 ATAT1Q5SQI0 421 aa15.1■□□□□ 0.01
CCHCR1-227ENST00000508852 HAUS3Q68CZ6 603 aa15.1■□□□□ 0.01
CCHCR1-227ENST00000508852 SYCE2Q6PIF2 218 aa15.1■□□□□ 0.01
CCHCR1-227ENST00000508852 TRIM67Q6ZTA4 783 aa15.1■□□□□ 0.01
CCHCR1-227ENST00000508852 FAM184AQ8NB25 1140 aa15.1■□□□□ 0.01
CCHCR1-227ENST00000508852 GBP3Q9H0R5 595 aa15.1■□□□□ 0.01
CCHCR1-227ENST00000508852 C2orf40Q9H1Z8 148 aa15.1■□□□□ 0.01
CCHCR1-227ENST00000508852 MINDY3Q9H8M7 445 aa15.1■□□□□ 0.01
CCHCR1-227ENST00000508852 MRPL17Q9NRX2 175 aaKnown RBP15.1■□□□□ 0.01
CCHCR1-227ENST00000508852 NOL7Q9UMY1 257 aaKnown RBP15.1■□□□□ 0.01
CCHCR1-227ENST00000508852 KIF3AQ9Y496 699 aa15.1■□□□□ 0.01
CCHCR1-227ENST00000508852 TDRD15B5MCY1 1934 aaKnown RBP15.09■□□□□ 0.01
CCHCR1-227ENST00000508852 FAM205CA6NFA0 338 aa15.09■□□□□ 0.01
CCHCR1-227ENST00000508852 TSPAN1O60635 241 aa15.09■□□□□ 0.01
CCHCR1-227ENST00000508852 JAK2O60674 1132 aa15.09■□□□□ 0.01
CCHCR1-227ENST00000508852 MCM7P33993 719 aa15.09■□□□□ 0.01
CCHCR1-227ENST00000508852 SLC11A1P49279 550 aa15.09■□□□□ 0.01
CCHCR1-227ENST00000508852 SIGLEC14Q08ET2 396 aa15.09■□□□□ 0.01
CCHCR1-227ENST00000508852 UBXN11Q5T124 520 aa15.09■□□□□ 0.01
CCHCR1-227ENST00000508852 SLC27A1Q6PCB7 646 aa15.09■□□□□ 0.01
CCHCR1-227ENST00000508852 ZBTB8OSQ8IWT0 167 aa15.09■□□□□ 0.01
CCHCR1-227ENST00000508852 PLCD3Q8N3E9 789 aa15.09■□□□□ 0.01
CCHCR1-227ENST00000508852 RAB34Q9BZG1 259 aa15.09■□□□□ 0.01
CCHCR1-227ENST00000508852 XPNPEP1Q9NQW7 623 aa15.09■□□□□ 0.01
CCHCR1-227ENST00000508852 BMP2KQ9NSY1 1161 aaPredicted RBP15.09■□□□□ 0.01
CCHCR1-227ENST00000508852 PRMT7Q9NVM4 692 aaPredicted RBP15.09■□□□□ 0.01
CCHCR1-227ENST00000508852 IPPQ9Y573 584 aa15.09■□□□□ 0.01
CCHCR1-227ENST00000508852 TMEM221A6NGB7 291 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms