RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 KCND2Q9NZV8 630 aa9.74□□□□□ -0.85
SCAMP1-202ENST00000506858 TMEM63CQ9P1W3 806 aa9.74□□□□□ -0.85
SCAMP1-202ENST00000506858 ODF2LQ9ULJ1 636 aa9.74□□□□□ -0.85
SCAMP1-202ENST00000506858 FRMD3A2A2Y4 597 aa9.73□□□□□ -0.85
SCAMP1-202ENST00000506858 K7ENM7 598 aa9.73□□□□□ -0.85
SCAMP1-202ENST00000506858 GCNT3O95395 438 aa9.73□□□□□ -0.85
SCAMP1-202ENST00000506858 MAPTP10636 758 aaKnown RBP9.73□□□□□ -0.85
SCAMP1-202ENST00000506858 HOXD13P35453 343 aa9.73□□□□□ -0.85
SCAMP1-202ENST00000506858 MAGEA10P43363 369 aaPredicted RBP9.73□□□□□ -0.85
SCAMP1-202ENST00000506858 NAMPTP43490 491 aa9.73□□□□□ -0.85
SCAMP1-202ENST00000506858 PHKA2P46019 1235 aa9.73□□□□□ -0.85
SCAMP1-202ENST00000506858 TFDP1Q14186 410 aa9.73□□□□□ -0.85
SCAMP1-202ENST00000506858 AMHR2Q16671 573 aa9.73□□□□□ -0.85
SCAMP1-202ENST00000506858 FAM26FQ5R3K3 315 aa9.73□□□□□ -0.85
SCAMP1-202ENST00000506858 NT5DC1Q5TFE4 455 aa9.73□□□□□ -0.85
SCAMP1-202ENST00000506858 EEF1DP3Q658K8 133 aa9.73□□□□□ -0.85
SCAMP1-202ENST00000506858 CAVIN1Q6NZI2 390 aaKnown RBP9.73□□□□□ -0.85
SCAMP1-202ENST00000506858 ZNF365Q70YC5 407 aa9.73□□□□□ -0.85
SCAMP1-202ENST00000506858 OTOP2Q7RTS6 562 aa9.73□□□□□ -0.85
SCAMP1-202ENST00000506858 CATSPER4Q7RTX7 472 aa9.73□□□□□ -0.85
SCAMP1-202ENST00000506858 ZNF720Q7Z2F6 126 aa9.73□□□□□ -0.85
SCAMP1-202ENST00000506858 HAUS6Q7Z4H7 955 aa9.73□□□□□ -0.85
SCAMP1-202ENST00000506858 NELFCDQ8IXH7 590 aa9.73□□□□□ -0.85
SCAMP1-202ENST00000506858 MARVELD3Q96A59 401 aa9.73□□□□□ -0.85
SCAMP1-202ENST00000506858 TARS2Q9BW92 718 aaKnown RBP9.73□□□□□ -0.85
SCAMP1-202ENST00000506858 NUP62CLQ9H1M0 184 aa9.73□□□□□ -0.85
SCAMP1-202ENST00000506858 MAGEF1Q9HAY2 307 aa9.73□□□□□ -0.85
SCAMP1-202ENST00000506858 ERVK-5Q9HDB9 667 aa9.73□□□□□ -0.85
SCAMP1-202ENST00000506858 MAN1B1Q9UKM7 699 aa9.73□□□□□ -0.85
SCAMP1-202ENST00000506858 NR2E3Q9Y5X4 410 aa9.73□□□□□ -0.85
SCAMP1-202ENST00000506858 ANKRD63C9JTQ0 380 aa9.72□□□□□ -0.85
SCAMP1-202ENST00000506858 K7ERI5 159 aa9.72□□□□□ -0.85
SCAMP1-202ENST00000506858 PRKCBP05771 671 aa9.72□□□□□ -0.85
SCAMP1-202ENST00000506858 BMP6P22004 513 aa9.72□□□□□ -0.85
SCAMP1-202ENST00000506858 HOXA11P31270 313 aaPredicted RBP9.72□□□□□ -0.85
SCAMP1-202ENST00000506858 NCKAP1LP55160 1127 aa9.72□□□□□ -0.85
SCAMP1-202ENST00000506858 MLLT1Q03111 559 aaPredicted RBP9.72□□□□□ -0.85
SCAMP1-202ENST00000506858 EHHADHQ08426 723 aa9.72□□□□□ -0.85
SCAMP1-202ENST00000506858 PAK2Q13177 524 aa9.72□□□□□ -0.85
SCAMP1-202ENST00000506858 PPP2R5AQ15172 486 aa9.72□□□□□ -0.85
SCAMP1-202ENST00000506858 PLEKHG4Q58EX7 1191 aa9.72□□□□□ -0.85
SCAMP1-202ENST00000506858 C9orf50Q5SZB4 431 aa9.72□□□□□ -0.85
SCAMP1-202ENST00000506858 CDCA2Q69YH5 1023 aaPredicted RBP9.72□□□□□ -0.85
SCAMP1-202ENST00000506858 KANK3Q6NY19 840 aa9.72□□□□□ -0.85
SCAMP1-202ENST00000506858 CNNM4Q6P4Q7 775 aa9.72□□□□□ -0.85
SCAMP1-202ENST00000506858 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.72□□□□□ -0.85
SCAMP1-202ENST00000506858 ZNF410Q86VK4 478 aa9.72□□□□□ -0.85
SCAMP1-202ENST00000506858 ZBTB8OSQ8IWT0 167 aa9.72□□□□□ -0.85
SCAMP1-202ENST00000506858 KIAA0895Q8NCT3 520 aa9.72□□□□□ -0.85
SCAMP1-202ENST00000506858 SPIRE2Q8WWL2 714 aa9.72□□□□□ -0.85
SCAMP1-202ENST00000506858 LINC01599Q8WXQ3 324 aa9.72□□□□□ -0.85
SCAMP1-202ENST00000506858 SMARCE1Q969G3 411 aa9.72□□□□□ -0.85
SCAMP1-202ENST00000506858 LBHD1Q9BQE6 289 aaPredicted RBP9.72□□□□□ -0.85
SCAMP1-202ENST00000506858 TIPINQ9BVW5 301 aa9.72□□□□□ -0.85
SCAMP1-202ENST00000506858 IFIH1Q9BYX4 1025 aaKnown RBP9.72□□□□□ -0.85
SCAMP1-202ENST00000506858 LRRC27Q9C0I9 530 aa9.72□□□□□ -0.85
SCAMP1-202ENST00000506858 CCDC113Q9H0I3 377 aa9.72□□□□□ -0.85
SCAMP1-202ENST00000506858 RNF19AQ9NV58 838 aa9.72□□□□□ -0.85
SCAMP1-202ENST00000506858 EXOC1Q9NV70 894 aa9.72□□□□□ -0.85
SCAMP1-202ENST00000506858 LARSQ9P2J5 1176 aaKnown RBP9.72□□□□□ -0.85
SCAMP1-202ENST00000506858 ARHGAP28Q9P2N2 729 aa9.72□□□□□ -0.85
SCAMP1-202ENST00000506858 MYH11P35749 1972 aa9.72□□□□□ -0.85
SCAMP1-202ENST00000506858 SIP14410 1827 aa9.72□□□□□ -0.85
SCAMP1-202ENST00000506858 PVALEFA0A1B0GWK0 134 aa9.71□□□□□ -0.85
SCAMP1-202ENST00000506858 TSPAN1O60635 241 aa9.71□□□□□ -0.85
SCAMP1-202ENST00000506858 CAND2O75155 1236 aa9.71□□□□□ -0.85
SCAMP1-202ENST00000506858 HARSP12081 509 aaKnown RBP9.71□□□□□ -0.85
SCAMP1-202ENST00000506858 GAP43P17677 238 aa9.71□□□□□ -0.85
SCAMP1-202ENST00000506858 ARF4P18085 180 aaPredicted RBP9.71□□□□□ -0.85
SCAMP1-202ENST00000506858 SARSP49591 514 aaKnown RBP9.71□□□□□ -0.85
SCAMP1-202ENST00000506858 SMTNP53814 917 aa9.71□□□□□ -0.85
SCAMP1-202ENST00000506858 FPGSQ05932 587 aa9.71□□□□□ -0.85
SCAMP1-202ENST00000506858 TMEM132AQ24JP5 1023 aa9.71□□□□□ -0.85
SCAMP1-202ENST00000506858 SEZ6Q53EL9 994 aa9.71□□□□□ -0.85
SCAMP1-202ENST00000506858 FAM117BQ6P1L5 589 aa9.71□□□□□ -0.85
SCAMP1-202ENST00000506858 TMEM92Q6UXU6 159 aa9.71□□□□□ -0.85
SCAMP1-202ENST00000506858 TSHZ1Q6ZSZ6 1077 aa9.71□□□□□ -0.85
SCAMP1-202ENST00000506858 SRGAP1Q7Z6B7 1085 aa9.71□□□□□ -0.85
SCAMP1-202ENST00000506858 ZBTB33Q86T24 672 aa9.71□□□□□ -0.85
SCAMP1-202ENST00000506858 TMEM199Q8N511 208 aa9.71□□□□□ -0.85
SCAMP1-202ENST00000506858 ZSWIM2Q8NEG5 633 aa9.71□□□□□ -0.85
SCAMP1-202ENST00000506858 SCFD1Q8WVM8 642 aa9.71□□□□□ -0.85
SCAMP1-202ENST00000506858 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.71□□□□□ -0.85
SCAMP1-202ENST00000506858 NTPCRQ9BSD7 190 aaKnown RBP9.71□□□□□ -0.85
SCAMP1-202ENST00000506858 EIF2AQ9BY44 585 aaKnown RBP9.71□□□□□ -0.85
SCAMP1-202ENST00000506858 FZD8Q9H461 694 aa9.71□□□□□ -0.85
SCAMP1-202ENST00000506858 IL23AQ9NPF7 189 aa9.71□□□□□ -0.85
SCAMP1-202ENST00000506858 CXXC1Q9P0U4 656 aaPredicted RBP9.71□□□□□ -0.85
SCAMP1-202ENST00000506858 TBX20Q9UMR3 447 aa9.71□□□□□ -0.85
SCAMP1-202ENST00000506858 PIN4Q9Y237 131 aaKnown RBP9.71□□□□□ -0.85
SCAMP1-202ENST00000506858 TRIOBPQ9H2D6 2365 aa9.71□□□□□ -0.85
SCAMP1-202ENST00000506858 MEIS3P2A8K0S8 358 aa9.71□□□□□ -0.86
SCAMP1-202ENST00000506858 TULP1O00294 542 aaPredicted RBP9.71□□□□□ -0.86
SCAMP1-202ENST00000506858 PPP1R37O75864 691 aa9.71□□□□□ -0.86
SCAMP1-202ENST00000506858 MBD3O95983 291 aa9.71□□□□□ -0.86
SCAMP1-202ENST00000506858 CXCL10P02778 98 aa9.71□□□□□ -0.86
SCAMP1-202ENST00000506858 PRPF4BQ13523 1007 aaKnown RBP9.71□□□□□ -0.86
SCAMP1-202ENST00000506858 MAPK6Q16659 721 aa9.71□□□□□ -0.86
SCAMP1-202ENST00000506858 TMEM240Q5SV17 173 aa9.71□□□□□ -0.86
SCAMP1-202ENST00000506858 SLC39A4Q6P5W5 647 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms