RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 HNRNPLP14866 589 aaKnown RBP eCLIP3.83□□□□□ -1.8
TOPBP1-205ENST00000506779 KCNA6P17658 529 aa3.83□□□□□ -1.8
TOPBP1-205ENST00000506779 IGFALSP35858 605 aa3.83□□□□□ -1.8
TOPBP1-205ENST00000506779 RABGGTBP53611 331 aa3.83□□□□□ -1.8
TOPBP1-205ENST00000506779 PABPC4Q13310 644 aaKnown RBP eCLIP3.83□□□□□ -1.8
TOPBP1-205ENST00000506779 SPIDRQ14159 915 aa3.83□□□□□ -1.8
TOPBP1-205ENST00000506779 PTPAQ15257 358 aa3.83□□□□□ -1.8
TOPBP1-205ENST00000506779 LY6G5CQ5SRR4 150 aa3.83□□□□□ -1.8
TOPBP1-205ENST00000506779 ZCCHC8Q6NZY4 707 aaKnown RBP3.83□□□□□ -1.8
TOPBP1-205ENST00000506779 NME9Q86XW9 330 aa3.83□□□□□ -1.8
TOPBP1-205ENST00000506779 C7orf31Q8N865 590 aa3.83□□□□□ -1.8
TOPBP1-205ENST00000506779 KIAA1958Q8N8K9 716 aa3.83□□□□□ -1.8
TOPBP1-205ENST00000506779 Q8N9P0 234 aaPredicted RBP3.83□□□□□ -1.8
TOPBP1-205ENST00000506779 ST8SIA2Q92186 375 aa3.83□□□□□ -1.8
TOPBP1-205ENST00000506779 EPC1Q9H2F5 836 aa3.83□□□□□ -1.8
TOPBP1-205ENST00000506779 SYNPO2LQ9H987 977 aa3.83□□□□□ -1.8
TOPBP1-205ENST00000506779 SORCS3Q9UPU3 1222 aa3.83□□□□□ -1.8
TOPBP1-205ENST00000506779 XDHP47989 1333 aa3.83□□□□□ -1.8
TOPBP1-205ENST00000506779 PTPDC1A2A3K4 754 aa3.82□□□□□ -1.8
TOPBP1-205ENST00000506779 OPA1O60313 960 aa3.82□□□□□ -1.8
TOPBP1-205ENST00000506779 RECQL4O94761 1208 aa3.82□□□□□ -1.8
TOPBP1-205ENST00000506779 GYPEP15421 78 aa3.82□□□□□ -1.8
TOPBP1-205ENST00000506779 SDSP20132 328 aa3.82□□□□□ -1.8
TOPBP1-205ENST00000506779 HSD3B2P26439 372 aa3.82□□□□□ -1.8
TOPBP1-205ENST00000506779 MECP2P51608 486 aaKnown RBP3.82□□□□□ -1.8
TOPBP1-205ENST00000506779 ADCY2Q08462 1091 aa3.82□□□□□ -1.8
TOPBP1-205ENST00000506779 ZNF460Q14592 562 aa3.82□□□□□ -1.8
TOPBP1-205ENST00000506779 DALRD3Q5D0E6 543 aaKnown RBP3.82□□□□□ -1.8
TOPBP1-205ENST00000506779 EGFLAMQ63HQ2 1017 aa3.82□□□□□ -1.8
TOPBP1-205ENST00000506779 TIGD7Q6NT04 549 aaPredicted RBP3.82□□□□□ -1.8
TOPBP1-205ENST00000506779 RD3Q7Z3Z2 195 aa3.82□□□□□ -1.8
TOPBP1-205ENST00000506779 HDGFL2Q7Z4V5 671 aaPredicted RBP3.82□□□□□ -1.8
TOPBP1-205ENST00000506779 CMTM4Q8IZR5 234 aa3.82□□□□□ -1.8
TOPBP1-205ENST00000506779 MDGA1Q8NFP4 955 aa3.82□□□□□ -1.8
TOPBP1-205ENST00000506779 CPT1CQ8TCG5 803 aa3.82□□□□□ -1.8
TOPBP1-205ENST00000506779 SMG7Q92540 1137 aaKnown RBP3.82□□□□□ -1.8
TOPBP1-205ENST00000506779 LENG9Q96B70 501 aa3.82□□□□□ -1.8
TOPBP1-205ENST00000506779 UIMC1Q96RL1 719 aa3.82□□□□□ -1.8
TOPBP1-205ENST00000506779 TRPS1Q9UHF7 1281 aa3.82□□□□□ -1.8
TOPBP1-205ENST00000506779 PLAAQ9Y263 795 aa3.82□□□□□ -1.8
TOPBP1-205ENST00000506779 TNPO3Q9Y5L0 923 aaKnown RBP3.82□□□□□ -1.8
TOPBP1-205ENST00000506779 ZCCHC6Q5VYS8 1495 aaKnown RBP3.81□□□□□ -1.8
TOPBP1-205ENST00000506779 DVL2O14641 736 aa3.81□□□□□ -1.8
TOPBP1-205ENST00000506779 NRP1O14786 923 aa3.81□□□□□ -1.8
TOPBP1-205ENST00000506779 KIAA0355O15063 1070 aa3.81□□□□□ -1.8
TOPBP1-205ENST00000506779 ITGB1P05556 798 aa3.81□□□□□ -1.8
TOPBP1-205ENST00000506779 HK1P19367 917 aa3.81□□□□□ -1.8
TOPBP1-205ENST00000506779 KIR2DL3P43628 341 aa3.81□□□□□ -1.8
TOPBP1-205ENST00000506779 ADCY1Q08828 1119 aa3.81□□□□□ -1.8
TOPBP1-205ENST00000506779 MYBPC3Q14896 1274 aa3.81□□□□□ -1.8
TOPBP1-205ENST00000506779 EPHA7Q15375 998 aa3.81□□□□□ -1.8
TOPBP1-205ENST00000506779 MAN2A1Q16706 1144 aa3.81□□□□□ -1.8
TOPBP1-205ENST00000506779 TIGD2Q4W5G0 525 aa3.81□□□□□ -1.8
TOPBP1-205ENST00000506779 DCAF17Q5H9S7 520 aaPredicted RBP3.81□□□□□ -1.8
TOPBP1-205ENST00000506779 OLFML1Q6UWY5 402 aa3.81□□□□□ -1.8
TOPBP1-205ENST00000506779 LRRC55Q6ZSA7 311 aa3.81□□□□□ -1.8
TOPBP1-205ENST00000506779 HTR3DQ70Z44 454 aa3.81□□□□□ -1.8
TOPBP1-205ENST00000506779 NINJ1Q92982 152 aa3.81□□□□□ -1.8
TOPBP1-205ENST00000506779 MFSD3Q96ES6 412 aa3.81□□□□□ -1.8
TOPBP1-205ENST00000506779 MLST8Q9BVC4 326 aa3.81□□□□□ -1.8
TOPBP1-205ENST00000506779 R3HDMLQ9H3Y0 253 aa3.81□□□□□ -1.8
TOPBP1-205ENST00000506779 MTG2Q9H4K7 406 aa3.81□□□□□ -1.8
TOPBP1-205ENST00000506779 FZD1Q9UP38 647 aa3.81□□□□□ -1.8
TOPBP1-205ENST00000506779 LOC105371045A0A1W2PR82 267 aa3.8□□□□□ -1.8
TOPBP1-205ENST00000506779 TRIM24O15164 1050 aa3.8□□□□□ -1.8
TOPBP1-205ENST00000506779 MTSS1O43312 755 aa3.8□□□□□ -1.8
TOPBP1-205ENST00000506779 FSBPO95073 299 aa3.8□□□□□ -1.8
TOPBP1-205ENST00000506779 SCAF4O95104 1147 aaKnown RBP3.8□□□□□ -1.8
TOPBP1-205ENST00000506779 ASLP04424 464 aa3.8□□□□□ -1.8
TOPBP1-205ENST00000506779 PTX3P26022 381 aaPredicted RBP3.8□□□□□ -1.8
TOPBP1-205ENST00000506779 FLT3P36888 993 aa3.8□□□□□ -1.8
TOPBP1-205ENST00000506779 CLK3P49761 638 aaKnown RBP3.8□□□□□ -1.8
TOPBP1-205ENST00000506779 FAM214AQ32MH5 1076 aa3.8□□□□□ -1.8
TOPBP1-205ENST00000506779 PIK3R6Q5UE93 754 aa3.8□□□□□ -1.8
TOPBP1-205ENST00000506779 C1QL3Q5VWW1 255 aa3.8□□□□□ -1.8
TOPBP1-205ENST00000506779 APBB1IPQ7Z5R6 666 aaPredicted RBP3.8□□□□□ -1.8
TOPBP1-205ENST00000506779 PHYKPLQ8IUZ5 450 aa3.8□□□□□ -1.8
TOPBP1-205ENST00000506779 NIM1KQ8IY84 436 aa3.8□□□□□ -1.8
TOPBP1-205ENST00000506779 HIST1H2AHQ96KK5 128 aa3.8□□□□□ -1.8
TOPBP1-205ENST00000506779 C16orf92Q96LL3 132 aa3.8□□□□□ -1.8
TOPBP1-205ENST00000506779 HIST1H2AJQ99878 128 aa3.8□□□□□ -1.8
TOPBP1-205ENST00000506779 NOL10Q9BSC4 688 aaKnown RBP3.8□□□□□ -1.8
TOPBP1-205ENST00000506779 HAPLN2Q9GZV7 340 aa3.8□□□□□ -1.8
TOPBP1-205ENST00000506779 INTS7Q9NVH2 962 aaKnown RBP3.8□□□□□ -1.8
TOPBP1-205ENST00000506779 MAGEC2Q9UBF1 373 aaPredicted RBP3.8□□□□□ -1.8
TOPBP1-205ENST00000506779 EIF2B4Q9UI10 523 aaKnown RBP3.8□□□□□ -1.8
TOPBP1-205ENST00000506779 DCAF1Q9Y4B6 1507 aa3.8□□□□□ -1.8
TOPBP1-205ENST00000506779 CADPSQ9ULU8 1353 aa3.79□□□□□ -1.8
TOPBP1-205ENST00000506779 MYADML2A6NDP7 307 aa3.79□□□□□ -1.8
TOPBP1-205ENST00000506779 GSG1L2A8MUP6 293 aa3.79□□□□□ -1.8
TOPBP1-205ENST00000506779 B3GALT2O43825 422 aa3.79□□□□□ -1.8
TOPBP1-205ENST00000506779 OPHN1O60890 802 aa3.79□□□□□ -1.8
TOPBP1-205ENST00000506779 STC2O76061 302 aa3.79□□□□□ -1.8
TOPBP1-205ENST00000506779 SLC9A1P19634 815 aa3.79□□□□□ -1.8
TOPBP1-205ENST00000506779 C21orf62-AS1Q17RA5 79 aa3.79□□□□□ -1.8
TOPBP1-205ENST00000506779 PRR16Q569H4 304 aa3.79□□□□□ -1.8
TOPBP1-205ENST00000506779 HECTD2Q5U5R9 776 aa3.79□□□□□ -1.8
TOPBP1-205ENST00000506779 NAIF1Q69YI7 327 aaPredicted RBP3.79□□□□□ -1.8
TOPBP1-205ENST00000506779 KIAA1841Q6NSI8 718 aa3.79□□□□□ -1.8
TOPBP1-205ENST00000506779 UBE2R2Q712K3 238 aaPredicted RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms