RNA–Protein interactions for RNA: ENST00000506443.5

COPS4-204, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 4

Gene COPS4, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-204ENST00000506443 DDHD2O94830 711 aa10.11□□□□□ -0.79
COPS4-204ENST00000506443 DARSP14868 501 aaKnown RBP10.11□□□□□ -0.79
COPS4-204ENST00000506443 ZSCAN20P17040 1043 aaPredicted RBP10.11□□□□□ -0.79
COPS4-204ENST00000506443 CD72P21854 359 aa10.11□□□□□ -0.79
COPS4-204ENST00000506443 TGM1P22735 817 aa10.11□□□□□ -0.79
COPS4-204ENST00000506443 HOXC13P31276 330 aa10.11□□□□□ -0.79
COPS4-204ENST00000506443 ZNF76P36508 570 aa10.11□□□□□ -0.79
COPS4-204ENST00000506443 ALDH7A1P49419 539 aaKnown RBP10.11□□□□□ -0.79
COPS4-204ENST00000506443 ADCY7P51828 1080 aa10.11□□□□□ -0.79
COPS4-204ENST00000506443 NTHL1P78549 312 aa10.11□□□□□ -0.79
COPS4-204ENST00000506443 AP3B2Q13367 1082 aa10.11□□□□□ -0.79
COPS4-204ENST00000506443 HTR4Q13639 388 aa10.11□□□□□ -0.79
COPS4-204ENST00000506443 ZNF746Q6NUN9 644 aaPredicted RBP10.11□□□□□ -0.79
COPS4-204ENST00000506443 APOA5Q6Q788 366 aa10.11□□□□□ -0.79
COPS4-204ENST00000506443 DDX53Q86TM3 631 aaKnown RBP10.11□□□□□ -0.79
COPS4-204ENST00000506443 MICU3Q86XE3 530 aa10.11□□□□□ -0.79
COPS4-204ENST00000506443 GLYCTKQ8IVS8 523 aa10.11□□□□□ -0.79
COPS4-204ENST00000506443 C1orf210Q8IVY1 113 aa10.11□□□□□ -0.79
COPS4-204ENST00000506443 CKAP2LQ8IYA6 745 aa10.11□□□□□ -0.79
COPS4-204ENST00000506443 PJA1Q8NG27 643 aa10.11□□□□□ -0.79
COPS4-204ENST00000506443 RNF25Q96BH1 459 aaPredicted RBP10.11□□□□□ -0.79
COPS4-204ENST00000506443 ACSF2Q96CM8 615 aaPredicted RBP10.11□□□□□ -0.79
COPS4-204ENST00000506443 TRAIPQ9BWF2 469 aa10.11□□□□□ -0.79
COPS4-204ENST00000506443 TBC1D22BQ9NU19 505 aa10.11□□□□□ -0.79
COPS4-204ENST00000506443 BARHL2Q9NY43 387 aa10.11□□□□□ -0.79
COPS4-204ENST00000506443 CACNG4Q9UBN1 327 aa10.11□□□□□ -0.79
COPS4-204ENST00000506443 BRPF3Q9ULD4 1205 aa10.11□□□□□ -0.79
COPS4-204ENST00000506443 PCDHA10Q9Y5I2 948 aa10.11□□□□□ -0.79
COPS4-204ENST00000506443 NUMBLQ9Y6R0 609 aa10.11□□□□□ -0.79
COPS4-204ENST00000506443 MTCL1Q9Y4B5 1905 aaKnown RBP10.11□□□□□ -0.79
COPS4-204ENST00000506443 CNOT1A5YKK6 2376 aaKnown RBP10.1□□□□□ -0.79
COPS4-204ENST00000506443 INPPL1O15357 1258 aa10.1□□□□□ -0.79
COPS4-204ENST00000506443 LILRB3O75022 631 aa10.1□□□□□ -0.79
COPS4-204ENST00000506443 SRFP11831 508 aa10.1□□□□□ -0.79
COPS4-204ENST00000506443 RPL17P18621 184 aaKnown RBP10.1□□□□□ -0.79
COPS4-204ENST00000506443 KLRC2P26717 231 aa10.1□□□□□ -0.79
COPS4-204ENST00000506443 POLGP54098 1239 aaPredicted RBP10.1□□□□□ -0.79
COPS4-204ENST00000506443 EXOSC10Q01780 885 aaKnown RBP10.1□□□□□ -0.79
COPS4-204ENST00000506443 TBC1D8BQ0IIM8 1120 aa10.1□□□□□ -0.79
COPS4-204ENST00000506443 JAKMIP3Q5VZ66 844 aa10.1□□□□□ -0.79
COPS4-204ENST00000506443 CREB3L3Q68CJ9 461 aa10.1□□□□□ -0.79
COPS4-204ENST00000506443 KSR1Q8IVT5 923 aa10.1□□□□□ -0.79
COPS4-204ENST00000506443 SMAP1Q8IYB5 467 aaPredicted RBP10.1□□□□□ -0.79
COPS4-204ENST00000506443 FGF14Q92915 247 aa10.1□□□□□ -0.79
COPS4-204ENST00000506443 LENG9Q96B70 501 aa10.1□□□□□ -0.79
COPS4-204ENST00000506443 SCLT1Q96NL6 688 aa10.1□□□□□ -0.79
COPS4-204ENST00000506443 NCDNQ9UBB6 729 aa10.1□□□□□ -0.79
COPS4-204ENST00000506443 GABBR1Q9UBS5 961 aa10.1□□□□□ -0.79
COPS4-204ENST00000506443 WNT16Q9UBV4 365 aa10.1□□□□□ -0.79
COPS4-204ENST00000506443 SMG5Q9UPR3 1016 aaKnown RBP10.1□□□□□ -0.79
COPS4-204ENST00000506443 PRG3Q9Y2Y8 225 aaPredicted RBP10.1□□□□□ -0.79
COPS4-204ENST00000506443 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.1□□□□□ -0.79
COPS4-204ENST00000506443 CEP295Q9C0D2 2601 aa10.09□□□□□ -0.79
COPS4-204ENST00000506443 IGF2RP11717 2491 aa10.09□□□□□ -0.79
COPS4-204ENST00000506443 CCDC195A0A1B0GUA6 201 aa10.09□□□□□ -0.79
COPS4-204ENST00000506443 hCG_1984214I3L0E3 225 aa10.09□□□□□ -0.79
COPS4-204ENST00000506443 TEX28O15482 410 aa10.09□□□□□ -0.79
COPS4-204ENST00000506443 PSAPP07602 524 aa10.09□□□□□ -0.79
COPS4-204ENST00000506443 CDC27P30260 824 aa10.09□□□□□ -0.79
COPS4-204ENST00000506443 PHKA2P46019 1235 aa10.09□□□□□ -0.79
COPS4-204ENST00000506443 PRKCEQ02156 737 aa10.09□□□□□ -0.79
COPS4-204ENST00000506443 TARBP2Q15633 366 aaKnown RBP10.09□□□□□ -0.79
COPS4-204ENST00000506443 VARS2Q5ST30 1063 aaKnown RBP10.09□□□□□ -0.79
COPS4-204ENST00000506443 PARM1Q6UWI2 310 aa10.09□□□□□ -0.79
COPS4-204ENST00000506443 TMEM92Q6UXU6 159 aa10.09□□□□□ -0.79
COPS4-204ENST00000506443 ZNF713Q8N859 430 aaPredicted RBP10.09□□□□□ -0.79
COPS4-204ENST00000506443 SMG7Q92540 1137 aaKnown RBP10.09□□□□□ -0.79
COPS4-204ENST00000506443 RABGGTAQ92696 567 aa10.09□□□□□ -0.79
COPS4-204ENST00000506443 TCEANC2Q96MN5 208 aa10.09□□□□□ -0.79
COPS4-204ENST00000506443 CEP89Q96ST8 783 aa10.09□□□□□ -0.79
COPS4-204ENST00000506443 ZNF577Q9BSK1 485 aa10.09□□□□□ -0.79
COPS4-204ENST00000506443 MRPL9Q9BYD2 267 aaKnown RBP10.09□□□□□ -0.79
COPS4-204ENST00000506443 GLT8D2Q9H1C3 349 aa10.09□□□□□ -0.79
COPS4-204ENST00000506443 WDR6Q9NNW5 1121 aaKnown RBP10.09□□□□□ -0.79
COPS4-204ENST00000506443 CHST12Q9NRB3 414 aa10.09□□□□□ -0.79
COPS4-204ENST00000506443 RBM28Q9NW13 759 aaKnown RBP10.09□□□□□ -0.79
COPS4-204ENST00000506443 IGSF9Q9P2J2 1179 aa10.09□□□□□ -0.79
COPS4-204ENST00000506443 EPS15L1Q9UBC2 864 aa10.09□□□□□ -0.79
COPS4-204ENST00000506443 CEP131Q9UPN4 1083 aa10.09□□□□□ -0.79
COPS4-204ENST00000506443 SIT1Q9Y3P8 196 aa10.09□□□□□ -0.79
COPS4-204ENST00000506443 FAM208BQ5VWN6 2430 aa10.09□□□□□ -0.79
COPS4-204ENST00000506443 TDRD15B5MCY1 1934 aaKnown RBP10.09□□□□□ -0.79
COPS4-204ENST00000506443 ARID2Q68CP9 1835 aa10.08□□□□□ -0.8
COPS4-204ENST00000506443 VWA8A3KMH1 1905 aa10.08□□□□□ -0.8
COPS4-204ENST00000506443 SHISA7A6NL88 538 aa10.08□□□□□ -0.8
COPS4-204ENST00000506443 KINO60870 393 aaKnown RBP10.08□□□□□ -0.8
COPS4-204ENST00000506443 ZNF623O75123 536 aa10.08□□□□□ -0.8
COPS4-204ENST00000506443 OFD1O75665 1012 aa10.08□□□□□ -0.8
COPS4-204ENST00000506443 STBD1O95210 358 aa10.08□□□□□ -0.8
COPS4-204ENST00000506443 POMCP01189 267 aa10.08□□□□□ -0.8
COPS4-204ENST00000506443 ADRB1P08588 477 aa10.08□□□□□ -0.8
COPS4-204ENST00000506443 TMOD1P28289 359 aa10.08□□□□□ -0.8
COPS4-204ENST00000506443 CIITAP33076 1130 aa10.08□□□□□ -0.8
COPS4-204ENST00000506443 AK2P54819 239 aa10.08□□□□□ -0.8
COPS4-204ENST00000506443 GPC5P78333 572 aa10.08□□□□□ -0.8
COPS4-204ENST00000506443 CSTF1Q05048 431 aaKnown RBP10.08□□□□□ -0.8
COPS4-204ENST00000506443 SNW1Q13573 536 aaKnown RBP10.08□□□□□ -0.8
COPS4-204ENST00000506443 COL9A2Q14055 689 aaPredicted RBP10.08□□□□□ -0.8
COPS4-204ENST00000506443 GIT2Q14161 759 aa10.08□□□□□ -0.8
COPS4-204ENST00000506443 NOMO2Q5JPE7 1267 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms