RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 ERLIN2O94905 339 aa14.6□□□□□ -0.07
PDLIM7-212ENST00000504380 PRPF6O94906 941 aaKnown RBP14.6□□□□□ -0.07
PDLIM7-212ENST00000504380 GCNT3O95395 438 aa14.6□□□□□ -0.07
PDLIM7-212ENST00000504380 PARNO95453 639 aaKnown RBP14.6□□□□□ -0.07
PDLIM7-212ENST00000504380 FGBP02675 491 aa14.6□□□□□ -0.07
PDLIM7-212ENST00000504380 SFPQP23246 707 aaKnown RBP eCLIP14.6□□□□□ -0.07
PDLIM7-212ENST00000504380 EHHADHQ08426 723 aa14.6□□□□□ -0.07
PDLIM7-212ENST00000504380 KCNA1Q09470 495 aa14.6□□□□□ -0.07
PDLIM7-212ENST00000504380 MAPK6Q16659 721 aa14.6□□□□□ -0.07
PDLIM7-212ENST00000504380 FAM26FQ5R3K3 315 aa14.6□□□□□ -0.07
PDLIM7-212ENST00000504380 NT5DC1Q5TFE4 455 aa14.6□□□□□ -0.07
PDLIM7-212ENST00000504380 CNKSR3Q6P9H4 555 aa14.6□□□□□ -0.07
PDLIM7-212ENST00000504380 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.6□□□□□ -0.07
PDLIM7-212ENST00000504380 ZNF720Q7Z2F6 126 aa14.6□□□□□ -0.07
PDLIM7-212ENST00000504380 USP38Q8NB14 1042 aa14.6□□□□□ -0.07
PDLIM7-212ENST00000504380 GDF15Q99988 308 aa14.6□□□□□ -0.07
PDLIM7-212ENST00000504380 TARS2Q9BW92 718 aaKnown RBP14.6□□□□□ -0.07
PDLIM7-212ENST00000504380 NFKBIZQ9BYH8 718 aa14.6□□□□□ -0.07
PDLIM7-212ENST00000504380 UBE2OQ9C0C9 1292 aaKnown RBP14.6□□□□□ -0.07
PDLIM7-212ENST00000504380 TMEM134Q9H6X4 195 aa14.6□□□□□ -0.07
PDLIM7-212ENST00000504380 PIN4Q9Y237 131 aaKnown RBP14.6□□□□□ -0.07
PDLIM7-212ENST00000504380 ZBBXA8MT70 800 aa14.59□□□□□ -0.07
PDLIM7-212ENST00000504380 BIN1O00499 593 aa14.59□□□□□ -0.07
PDLIM7-212ENST00000504380 ARF4P18085 180 aaPredicted RBP14.59□□□□□ -0.07
PDLIM7-212ENST00000504380 HOXA11P31270 313 aaPredicted RBP14.59□□□□□ -0.07
PDLIM7-212ENST00000504380 EFNA5P52803 228 aa14.59□□□□□ -0.07
PDLIM7-212ENST00000504380 STK4Q13043 487 aa14.59□□□□□ -0.07
PDLIM7-212ENST00000504380 PRPF4BQ13523 1007 aaKnown RBP14.59□□□□□ -0.07
PDLIM7-212ENST00000504380 DSC3Q14574 896 aa14.59□□□□□ -0.07
PDLIM7-212ENST00000504380 SHHQ15465 462 aa14.59□□□□□ -0.07
PDLIM7-212ENST00000504380 TMEM132AQ24JP5 1023 aa14.59□□□□□ -0.07
PDLIM7-212ENST00000504380 EEF1DP3Q658K8 133 aa14.59□□□□□ -0.07
PDLIM7-212ENST00000504380 TMCO2Q7Z6W1 182 aaPredicted RBP14.59□□□□□ -0.07
PDLIM7-212ENST00000504380 SMARCE1Q969G3 411 aa14.59□□□□□ -0.07
PDLIM7-212ENST00000504380 CCDC34Q96HJ3 373 aa14.59□□□□□ -0.07
PDLIM7-212ENST00000504380 ADAM2Q99965 735 aa14.59□□□□□ -0.07
PDLIM7-212ENST00000504380 AGPAT5Q9NUQ2 364 aa14.59□□□□□ -0.07
PDLIM7-212ENST00000504380 PRMT7Q9NVM4 692 aaPredicted RBP14.59□□□□□ -0.07
PDLIM7-212ENST00000504380 SEL1LQ9UBV2 794 aa14.59□□□□□ -0.07
PDLIM7-212ENST00000504380 TBX20Q9UMR3 447 aa14.59□□□□□ -0.07
PDLIM7-212ENST00000504380 GDAQ9Y2T3 454 aa14.59□□□□□ -0.07
PDLIM7-212ENST00000504380 PHLPP2Q6ZVD8 1323 aa14.59□□□□□ -0.07
PDLIM7-212ENST00000504380 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.58□□□□□ -0.08
PDLIM7-212ENST00000504380 TISP43B9A030 160 aa14.58□□□□□ -0.08
PDLIM7-212ENST00000504380 ACKR2O00590 384 aa14.58□□□□□ -0.08
PDLIM7-212ENST00000504380 ENPP3O14638 875 aa14.58□□□□□ -0.08
PDLIM7-212ENST00000504380 MYL1P05976 194 aa14.58□□□□□ -0.08
PDLIM7-212ENST00000504380 PFKMP08237 780 aa14.58□□□□□ -0.08
PDLIM7-212ENST00000504380 GTF2BQ00403 316 aa14.58□□□□□ -0.08
PDLIM7-212ENST00000504380 IKBKEQ14164 716 aa14.58□□□□□ -0.08
PDLIM7-212ENST00000504380 PPP4R3CPQ6ZMV5 832 aa14.58□□□□□ -0.08
PDLIM7-212ENST00000504380 NELFCDQ8IXH7 590 aa14.58□□□□□ -0.08
PDLIM7-212ENST00000504380 ELOA2Q8IYF1 753 aaPredicted RBP14.58□□□□□ -0.08
PDLIM7-212ENST00000504380 SMYD4Q8IYR2 804 aaPredicted RBP14.58□□□□□ -0.08
PDLIM7-212ENST00000504380 KIAA0895Q8NCT3 520 aa14.58□□□□□ -0.08
PDLIM7-212ENST00000504380 LRCH3Q96II8 777 aa14.58□□□□□ -0.08
PDLIM7-212ENST00000504380 ZBTB45Q96K62 511 aaPredicted RBP14.58□□□□□ -0.08
PDLIM7-212ENST00000504380 STRA6Q9BX79 667 aa14.58□□□□□ -0.08
PDLIM7-212ENST00000504380 EIF2AQ9BY44 585 aaKnown RBP14.58□□□□□ -0.08
PDLIM7-212ENST00000504380 NUP62CLQ9H1M0 184 aa14.58□□□□□ -0.08
PDLIM7-212ENST00000504380 OLFML3Q9NRN5 406 aa14.58□□□□□ -0.08
PDLIM7-212ENST00000504380 CXXC1Q9P0U4 656 aaPredicted RBP14.58□□□□□ -0.08
PDLIM7-212ENST00000504380 HOOK1Q9UJC3 728 aaKnown RBP14.58□□□□□ -0.08
PDLIM7-212ENST00000504380 MAN1B1Q9UKM7 699 aa14.58□□□□□ -0.08
PDLIM7-212ENST00000504380 LAMA3Q16787 3333 aa14.58□□□□□ -0.08
PDLIM7-212ENST00000504380 ANKRD63C9JTQ0 380 aa14.57□□□□□ -0.08
PDLIM7-212ENST00000504380 PPP1R37O75864 691 aa14.57□□□□□ -0.08
PDLIM7-212ENST00000504380 RHOBTB3O94955 611 aa14.57□□□□□ -0.08
PDLIM7-212ENST00000504380 SMC2O95347 1197 aa14.57□□□□□ -0.08
PDLIM7-212ENST00000504380 MBD3O95983 291 aa14.57□□□□□ -0.08
PDLIM7-212ENST00000504380 ZSCAN20P17040 1043 aaPredicted RBP14.57□□□□□ -0.08
PDLIM7-212ENST00000504380 HOXD13P35453 343 aa14.57□□□□□ -0.08
PDLIM7-212ENST00000504380 SARSP49591 514 aaKnown RBP14.57□□□□□ -0.08
PDLIM7-212ENST00000504380 DEFB103AP81534 67 aa14.57□□□□□ -0.08
PDLIM7-212ENST00000504380 STRN3Q13033 797 aa14.57□□□□□ -0.08
PDLIM7-212ENST00000504380 NFKBIBQ15653 356 aa14.57□□□□□ -0.08
PDLIM7-212ENST00000504380 FAM187BQ17R55 369 aa14.57□□□□□ -0.08
PDLIM7-212ENST00000504380 UBXN11Q5T124 520 aa14.57□□□□□ -0.08
PDLIM7-212ENST00000504380 TWF2Q6IBS0 349 aaKnown RBP14.57□□□□□ -0.08
PDLIM7-212ENST00000504380 PSRC1Q6PGN9 363 aaPredicted RBP14.57□□□□□ -0.08
PDLIM7-212ENST00000504380 ZBTB33Q86T24 672 aa14.57□□□□□ -0.08
PDLIM7-212ENST00000504380 APBB2Q92870 758 aa14.57□□□□□ -0.08
PDLIM7-212ENST00000504380 CCDC47Q96A33 483 aaKnown RBP14.57□□□□□ -0.08
PDLIM7-212ENST00000504380 BICD1Q96G01 975 aa14.57□□□□□ -0.08
PDLIM7-212ENST00000504380 ACO2Q99798 780 aaKnown RBP14.57□□□□□ -0.08
PDLIM7-212ENST00000504380 PDZD7Q9H5P4 517 aa14.57□□□□□ -0.08
PDLIM7-212ENST00000504380 KCNG1Q9UIX4 513 aa14.57□□□□□ -0.08
PDLIM7-212ENST00000504380 MAPK8IP1Q9UQF2 711 aa14.57□□□□□ -0.08
PDLIM7-212ENST00000504380 MICAL3Q7RTP6 2002 aa14.56□□□□□ -0.08
PDLIM7-212ENST00000504380 ABHD14A-ACY1A0A1B0GW23 586 aa14.56□□□□□ -0.08
PDLIM7-212ENST00000504380 H0YCG3 227 aa14.56□□□□□ -0.08
PDLIM7-212ENST00000504380 NPTXRO95502 500 aa14.56□□□□□ -0.08
PDLIM7-212ENST00000504380 HARSP12081 509 aaKnown RBP14.56□□□□□ -0.08
PDLIM7-212ENST00000504380 ACTN1P12814 892 aa14.56□□□□□ -0.08
PDLIM7-212ENST00000504380 WDR5P61964 334 aaKnown RBP14.56□□□□□ -0.08
PDLIM7-212ENST00000504380 KCNB1Q14721 858 aa14.56□□□□□ -0.08
PDLIM7-212ENST00000504380 L1TD1Q5T7N2 865 aaKnown RBP14.56□□□□□ -0.08
PDLIM7-212ENST00000504380 ATF7IP2Q5U623 682 aa14.56□□□□□ -0.08
PDLIM7-212ENST00000504380 FAM117BQ6P1L5 589 aa14.56□□□□□ -0.08
PDLIM7-212ENST00000504380 SLC39A4Q6P5W5 647 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms