RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 MRFAP1Q9Y605 127 aa17.62■□□□□ 0.41
PCDHA1-203ENST00000504120 DIP2AQ14689 1571 aa17.61■□□□□ 0.41
PCDHA1-203ENST00000504120 KPNA7A9QM74 516 aa17.61■□□□□ 0.41
PCDHA1-203ENST00000504120 FOXN1O15353 648 aa17.61■□□□□ 0.41
PCDHA1-203ENST00000504120 NCK2O43639 380 aa17.61■□□□□ 0.41
PCDHA1-203ENST00000504120 LMNAP02545 664 aaKnown RBP17.61■□□□□ 0.41
PCDHA1-203ENST00000504120 AKR1B1P15121 316 aa17.61■□□□□ 0.41
PCDHA1-203ENST00000504120 STAG2Q8N3U4 1231 aa17.61■□□□□ 0.41
PCDHA1-203ENST00000504120 PARD3BQ8TEW8 1205 aa17.61■□□□□ 0.41
PCDHA1-203ENST00000504120 RNF25Q96BH1 459 aaPredicted RBP17.61■□□□□ 0.41
PCDHA1-203ENST00000504120 NSUN4Q96CB9 384 aaKnown RBP17.61■□□□□ 0.41
PCDHA1-203ENST00000504120 GCNAQ96QF7 691 aa17.61■□□□□ 0.41
PCDHA1-203ENST00000504120 ACAD9Q9H845 621 aa17.61■□□□□ 0.41
PCDHA1-203ENST00000504120 A0A0G2JND7 137 aa17.61■□□□□ 0.41
PCDHA1-203ENST00000504120 STAP1Q9ULZ2 295 aa17.61■□□□□ 0.41
PCDHA1-203ENST00000504120 HEY1Q9Y5J3 304 aa17.61■□□□□ 0.41
PCDHA1-203ENST00000504120 SETSIPP0DME0 302 aa17.61■□□□□ 0.41
PCDHA1-203ENST00000504120 FCER1AP12319 257 aa17.61■□□□□ 0.41
PCDHA1-203ENST00000504120 MAGOHP61326 146 aaKnown RBP17.61■□□□□ 0.41
PCDHA1-203ENST00000504120 KRT80Q6KB66 452 aa17.61■□□□□ 0.41
PCDHA1-203ENST00000504120 TBC1D1Q86TI0 1168 aaPredicted RBP17.61■□□□□ 0.41
PCDHA1-203ENST00000504120 ZC3H15Q8WU90 426 aaKnown RBP17.61■□□□□ 0.41
PCDHA1-203ENST00000504120 CCDC138Q96M89 665 aa17.61■□□□□ 0.41
PCDHA1-203ENST00000504120 TRIM15Q9C019 465 aa17.61■□□□□ 0.41
PCDHA1-203ENST00000504120 M0QYV0 167 aa17.6■□□□□ 0.41
PCDHA1-203ENST00000504120 GUCY1A2P33402 732 aa17.6■□□□□ 0.41
PCDHA1-203ENST00000504120 PSMC1P62191 440 aaKnown RBP17.6■□□□□ 0.41
PCDHA1-203ENST00000504120 SPP2Q13103 211 aa17.6■□□□□ 0.41
PCDHA1-203ENST00000504120 ZNF211Q13398 564 aaPredicted RBP17.6■□□□□ 0.41
PCDHA1-203ENST00000504120 FSCBQ5H9T9 825 aa17.6■□□□□ 0.41
PCDHA1-203ENST00000504120 PHF20Q9BVI0 1012 aa17.6■□□□□ 0.41
PCDHA1-203ENST00000504120 APOBEC2Q9Y235 224 aaKnown RBP17.6■□□□□ 0.41
PCDHA1-203ENST00000504120 CPS1P31327 1500 aa17.6■□□□□ 0.41
PCDHA1-203ENST00000504120 USP27XA6NNY8 438 aa17.6■□□□□ 0.41
PCDHA1-203ENST00000504120 SLC16A3O15427 465 aaKnown RBP17.6■□□□□ 0.41
PCDHA1-203ENST00000504120 PEX19P40855 299 aa17.6■□□□□ 0.41
PCDHA1-203ENST00000504120 PPP2R2AP63151 447 aa17.6■□□□□ 0.41
PCDHA1-203ENST00000504120 MKRN3Q13064 507 aaKnown RBP17.6■□□□□ 0.41
PCDHA1-203ENST00000504120 FBXL13Q8NEE6 735 aa17.6■□□□□ 0.41
PCDHA1-203ENST00000504120 DDX47Q9H0S4 455 aaKnown RBP17.6■□□□□ 0.41
PCDHA1-203ENST00000504120 POLD4Q9HCU8 107 aa17.6■□□□□ 0.41
PCDHA1-203ENST00000504120 MDM2Q00987 491 aaPredicted RBP17.6■□□□□ 0.41
PCDHA1-203ENST00000504120 ANKRD40Q6AI12 368 aa17.6■□□□□ 0.41
PCDHA1-203ENST00000504120 RUBCNQ92622 972 aa17.6■□□□□ 0.41
PCDHA1-203ENST00000504120 ZNF512BQ96KM6 892 aaPredicted RBP17.6■□□□□ 0.41
PCDHA1-203ENST00000504120 TIPINQ9BVW5 301 aa17.6■□□□□ 0.41
PCDHA1-203ENST00000504120 PPARGC1AQ9UBK2 798 aaKnown RBP17.6■□□□□ 0.41
PCDHA1-203ENST00000504120 TARSL2A2RTX5 802 aaKnown RBP17.6■□□□□ 0.41
PCDHA1-203ENST00000504120 VGLL3A8MV65 326 aa17.6■□□□□ 0.41
PCDHA1-203ENST00000504120 TAP1Q03518 808 aa17.6■□□□□ 0.41
PCDHA1-203ENST00000504120 RHPN2Q8IUC4 686 aa17.6■□□□□ 0.41
PCDHA1-203ENST00000504120 GCOM2Q9BZD3 368 aaPredicted RBP17.6■□□□□ 0.41
PCDHA1-203ENST00000504120 PCDHA10Q9Y5I2 948 aa17.6■□□□□ 0.41
PCDHA1-203ENST00000504120 FRMD3A2A2Y4 597 aa17.59■□□□□ 0.41
PCDHA1-203ENST00000504120 COPB2P35606 906 aa17.59■□□□□ 0.41
PCDHA1-203ENST00000504120 HNRNPH2P55795 449 aaKnown RBP17.59■□□□□ 0.41
PCDHA1-203ENST00000504120 HDLBPQ00341 1268 aaKnown RBP17.59■□□□□ 0.41
PCDHA1-203ENST00000504120 TSPY1Q01534 308 aa17.59■□□□□ 0.41
PCDHA1-203ENST00000504120 DHX34Q14147 1143 aaKnown RBP17.59■□□□□ 0.41
PCDHA1-203ENST00000504120 SBK1Q52WX2 424 aa17.59■□□□□ 0.41
PCDHA1-203ENST00000504120 HAUS6Q7Z4H7 955 aa17.59■□□□□ 0.41
PCDHA1-203ENST00000504120 TRIM9Q9C026 710 aa17.59■□□□□ 0.41
PCDHA1-203ENST00000504120 ADGRB1O14514 1584 aa17.59■□□□□ 0.41
PCDHA1-203ENST00000504120 YWHAHQ04917 246 aaPredicted RBP17.59■□□□□ 0.41
PCDHA1-203ENST00000504120 TWF2Q6IBS0 349 aaKnown RBP17.59■□□□□ 0.41
PCDHA1-203ENST00000504120 GLYCTKQ8IVS8 523 aa17.59■□□□□ 0.41
PCDHA1-203ENST00000504120 TRIM59Q8IWR1 403 aa17.59■□□□□ 0.41
PCDHA1-203ENST00000504120 LRRC43Q8N309 656 aa17.59■□□□□ 0.41
PCDHA1-203ENST00000504120 GIPC2Q8TF65 315 aa17.59■□□□□ 0.41
PCDHA1-203ENST00000504120 SAAL1Q96ER3 474 aa17.59■□□□□ 0.41
PCDHA1-203ENST00000504120 KIF2CQ99661 725 aa17.59■□□□□ 0.41
PCDHA1-203ENST00000504120 EMSYQ7Z589 1322 aa17.59■□□□□ 0.41
PCDHA1-203ENST00000504120 GYS2P54840 703 aa17.59■□□□□ 0.41
PCDHA1-203ENST00000504120 LRRC31Q6UY01 552 aa17.59■□□□□ 0.41
PCDHA1-203ENST00000504120 SNF8Q96H20 258 aa17.59■□□□□ 0.41
PCDHA1-203ENST00000504120 FSD1LQ9BXM9 530 aa17.59■□□□□ 0.41
PCDHA1-203ENST00000504120 SUN2Q9UH99 717 aa17.59■□□□□ 0.41
PCDHA1-203ENST00000504120 KIAA0391O15091 583 aaKnown RBP17.59■□□□□ 0.41
PCDHA1-203ENST00000504120 SLC26A4O43511 780 aa17.59■□□□□ 0.41
PCDHA1-203ENST00000504120 SMARCA1P28370 1054 aa17.59■□□□□ 0.41
PCDHA1-203ENST00000504120 KYAT1Q16773 422 aa17.59■□□□□ 0.41
PCDHA1-203ENST00000504120 CEP55Q53EZ4 464 aa17.59■□□□□ 0.41
PCDHA1-203ENST00000504120 RBAKQ9NYW8 714 aaPredicted RBP17.59■□□□□ 0.41
PCDHA1-203ENST00000504120 HDAC6Q9UBN7 1215 aa17.59■□□□□ 0.41
PCDHA1-203ENST00000504120 PPME1Q9Y570 386 aa17.59■□□□□ 0.41
PCDHA1-203ENST00000504120 GMNCA6NCL1 334 aa17.58■□□□□ 0.41
PCDHA1-203ENST00000504120 KCNJ6P48051 423 aa17.58■□□□□ 0.41
PCDHA1-203ENST00000504120 ZNF746Q6NUN9 644 aaPredicted RBP17.58■□□□□ 0.41
PCDHA1-203ENST00000504120 SPDYE1Q8NFV5 336 aaPredicted RBP17.58■□□□□ 0.41
PCDHA1-203ENST00000504120 PXDNLA1KZ92 1463 aa17.58■□□□□ 0.41
PCDHA1-203ENST00000504120 GYG2O15488 501 aa17.58■□□□□ 0.41
PCDHA1-203ENST00000504120 INPP1P49441 399 aa17.58■□□□□ 0.41
PCDHA1-203ENST00000504120 CCDC137Q6PK04 289 aaKnown RBP17.58■□□□□ 0.41
PCDHA1-203ENST00000504120 MAGEB5Q9BZ81 275 aa17.58■□□□□ 0.41
PCDHA1-203ENST00000504120 PRKAG2Q9UGJ0 569 aa17.58■□□□□ 0.41
PCDHA1-203ENST00000504120 TRIM49P0CI25 452 aa17.58■□□□□ 0.4
PCDHA1-203ENST00000504120 TRIM49CP0CI26 452 aa17.58■□□□□ 0.4
PCDHA1-203ENST00000504120 GSPT2Q8IYD1 628 aaKnown RBP17.58■□□□□ 0.4
PCDHA1-203ENST00000504120 ZBTB18Q99592 522 aa17.58■□□□□ 0.4
PCDHA1-203ENST00000504120 SLC9A2Q9UBY0 812 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms