RNA–Protein interactions for RNA: ENST00000498524.5

ANKRD28-213, Transcript of ankyrin repeat domain 28, humanhuman

TSL 2

Gene ANKRD28, Length 4,289 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-213ENST00000498524 TTC38Q5R3I4 469 aa4.26□□□□□ -1.73
ANKRD28-213ENST00000498524 CCSAPQ6IQ19 270 aaPredicted RBP4.26□□□□□ -1.73
ANKRD28-213ENST00000498524 STXBP4Q6ZWJ1 553 aa4.26□□□□□ -1.73
ANKRD28-213ENST00000498524 TADA2BQ86TJ2 420 aa4.26□□□□□ -1.73
ANKRD28-213ENST00000498524 ZNF579Q8NAF0 562 aaKnown RBP4.26□□□□□ -1.73
ANKRD28-213ENST00000498524 TRIM58Q8NG06 486 aa4.26□□□□□ -1.73
ANKRD28-213ENST00000498524 TCP11Q8WWU5 503 aa4.26□□□□□ -1.73
ANKRD28-213ENST00000498524 ZBED3Q96IU2 234 aaPredicted RBP4.26□□□□□ -1.73
ANKRD28-213ENST00000498524 FUT8Q9BYC5 575 aa4.26□□□□□ -1.73
ANKRD28-213ENST00000498524 EPC1Q9H2F5 836 aa4.26□□□□□ -1.73
ANKRD28-213ENST00000498524 RANBP17Q9H2T7 1088 aaKnown RBP4.26□□□□□ -1.73
ANKRD28-213ENST00000498524 KCNQ5Q9NR82 932 aa4.26□□□□□ -1.73
ANKRD28-213ENST00000498524 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.26□□□□□ -1.73
ANKRD28-213ENST00000498524 SAMSN1Q9NSI8 373 aaKnown RBP4.26□□□□□ -1.73
ANKRD28-213ENST00000498524 KCNJ14Q9UNX9 436 aa4.26□□□□□ -1.73
ANKRD28-213ENST00000498524 ZNF532Q9HCE3 1301 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 SH2B2O14492 632 aaPredicted RBP4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 TBX3O15119 743 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 RPS6KA5O75582 802 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 MMP1P03956 469 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 PDGFRBP09619 1106 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 EEF2P13639 858 aaKnown RBP4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 CST5P28325 142 aaPredicted RBP4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 GJA9P57773 515 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 APBA1Q02410 837 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 SMAD4Q13485 552 aaKnown RBP4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 IFI16Q16666 785 aaKnown RBP4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 PPP1R18Q6NYC8 613 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 SHC4Q6S5L8 630 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 MMS22LQ6ZRQ5 1243 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 CCDC121Q6ZUS5 278 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 ERMP1Q7Z2K6 904 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 RABEPKQ7Z6M1 372 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 MB21D2Q8IYB1 491 aaPredicted RBP4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 CSGALNACT1Q8TDX6 532 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 NELFBQ8WX92 580 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 TRIB2Q92519 343 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 NSUN4Q96CB9 384 aaKnown RBP4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 RMDN3Q96TC7 470 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 AGXT2Q9BYV1 514 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 RMI1Q9H9A7 625 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 VIPAS39Q9H9C1 493 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 THG1LQ9NWX6 298 aaKnown RBP4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 CHCHD3Q9NX63 227 aaKnown RBP4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 SCAF8Q9UPN6 1271 aaKnown RBP4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 LY75O60449 1722 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 ARFGEF1Q9Y6D6 1849 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 TRIM64CA6NLI5 447 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 IFNAR1P17181 557 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 SMPD1P17405 629 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 CCT5P48643 541 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 COPB1P53618 953 aaKnown RBP4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 GNGT1P63211 74 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 TNNC1P63316 161 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 IFFO1Q0D2I5 559 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 TBC1D8BQ0IIM8 1120 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 SHHQ15465 462 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 Q3C1V9 767 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 MTSS1LQ765P7 747 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 EEPD1Q7L9B9 569 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 CABP7Q86V35 215 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 VPS36Q86VN1 386 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 METTL16Q86W50 562 aaKnown RBP4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 HERC6Q8IVU3 1022 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 IFT20Q8IY31 132 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 ELOA2Q8IYF1 753 aaPredicted RBP4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 TC2NQ8N9U0 490 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 KIF12Q96FN5 646 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 VMP1Q96GC9 406 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 CALML4Q96GE6 196 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 NACC1Q96RE7 527 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 EPAS1Q99814 870 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 PUS3Q9BZE2 481 aaKnown RBP4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 ZMYM5Q9UJ78 669 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 SRPRBQ9Y5M8 271 aaKnown RBP4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 ASTN2O75129 1339 aaPredicted RBP4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 TCP1P17987 556 aaKnown RBP4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 LIFRP42702 1097 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 SERPINB4P48594 390 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 LIG3P49916 1009 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 NCAPHQ15003 741 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 ZNF174Q15697 407 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 CYP4A22Q5TCH4 519 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 TRIM65Q6PJ69 517 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 CCDC50Q8IVM0 306 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 BCAS3Q9H6U6 928 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 ARMT1Q9H993 441 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 ERAP1Q9NZ08 941 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 IP6K2Q9UHH9 426 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 POLG2Q9UHN1 485 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 MKL2Q9ULH7 1088 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 PCDHB9Q9Y5E1 797 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 PKD1L3Q7Z443 1732 aa4.25□□□□□ -1.73
ANKRD28-213ENST00000498524 GOLGA6L10A0A0M3HER8 536 aa4.24□□□□□ -1.73
ANKRD28-213ENST00000498524 A0A1B0GTH6 734 aa4.24□□□□□ -1.73
ANKRD28-213ENST00000498524 MAP3K13O43283 966 aa4.24□□□□□ -1.73
ANKRD28-213ENST00000498524 ATG13O75143 517 aa4.24□□□□□ -1.73
ANKRD28-213ENST00000498524 RNASEH2AO75792 299 aaKnown RBP4.24□□□□□ -1.73
ANKRD28-213ENST00000498524 NDUFA10O95299 355 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms