RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 PBX4Q9BYU1 374 aa9.35□□□□□ -0.91
VPS13B-206ENST00000496144 SUCLA2Q9P2R7 463 aaPredicted RBP9.35□□□□□ -0.91
VPS13B-206ENST00000496144 SQORQ9Y6N5 450 aa9.35□□□□□ -0.91
VPS13B-206ENST00000496144 ATAD5Q96QE3 1844 aa9.34□□□□□ -0.91
VPS13B-206ENST00000496144 LOC285556D6RIA3 1793 aa9.34□□□□□ -0.91
VPS13B-206ENST00000496144 KLRC4O43908 158 aa9.34□□□□□ -0.91
VPS13B-206ENST00000496144 OATP04181 439 aa9.34□□□□□ -0.91
VPS13B-206ENST00000496144 HSP90AA4PQ58FG1 418 aa9.34□□□□□ -0.91
VPS13B-206ENST00000496144 TBCKQ8TEA7 893 aa9.34□□□□□ -0.91
VPS13B-206ENST00000496144 FAM20AQ96MK3 541 aa9.34□□□□□ -0.91
VPS13B-206ENST00000496144 MTMR9Q96QG7 549 aa9.34□□□□□ -0.91
VPS13B-206ENST00000496144 APOL6Q9BWW8 343 aa9.34□□□□□ -0.91
VPS13B-206ENST00000496144 PDCL3Q9H2J4 239 aa9.34□□□□□ -0.91
VPS13B-206ENST00000496144 KCNA5P22460 613 aa9.34□□□□□ -0.91
VPS13B-206ENST00000496144 TMEM62Q0P6H9 643 aa9.34□□□□□ -0.91
VPS13B-206ENST00000496144 POTEDQ86YR6 584 aa9.34□□□□□ -0.91
VPS13B-206ENST00000496144 CASP10Q92851 521 aa9.34□□□□□ -0.91
VPS13B-206ENST00000496144 RIT2Q99578 217 aa9.34□□□□□ -0.91
VPS13B-206ENST00000496144 CD207Q9UJ71 328 aa9.34□□□□□ -0.91
VPS13B-206ENST00000496144 RBBP6Q7Z6E9 1792 aaKnown RBP9.34□□□□□ -0.91
VPS13B-206ENST00000496144 TRAPPC3O43617 180 aa9.34□□□□□ -0.91
VPS13B-206ENST00000496144 PPP1R11O60927 126 aaPredicted RBP9.34□□□□□ -0.91
VPS13B-206ENST00000496144 CDK7P50613 346 aa9.34□□□□□ -0.91
VPS13B-206ENST00000496144 KMT5BQ4FZB7 885 aa9.34□□□□□ -0.91
VPS13B-206ENST00000496144 FAM102BQ5T8I3 360 aa9.34□□□□□ -0.91
VPS13B-206ENST00000496144 RHPN2Q8IUC4 686 aa9.34□□□□□ -0.91
VPS13B-206ENST00000496144 BANK1Q8NDB2 785 aa9.34□□□□□ -0.91
VPS13B-206ENST00000496144 PANX2Q96RD6 677 aa9.34□□□□□ -0.91
VPS13B-206ENST00000496144 ZSWIM4Q9H7M6 989 aa9.34□□□□□ -0.91
VPS13B-206ENST00000496144 KBTBD4Q9NVX7 518 aa9.34□□□□□ -0.91
VPS13B-206ENST00000496144 DBR1Q9UK59 544 aaKnown RBP9.34□□□□□ -0.91
VPS13B-206ENST00000496144 KLRC1P26715 233 aa9.34□□□□□ -0.91
VPS13B-206ENST00000496144 CMTR2Q8IYT2 770 aaKnown RBP9.34□□□□□ -0.91
VPS13B-206ENST00000496144 DBF4BQ8NFT6 615 aa9.34□□□□□ -0.91
VPS13B-206ENST00000496144 CCT6AP40227 531 aaKnown RBP9.33□□□□□ -0.92
VPS13B-206ENST00000496144 FXR2P51116 673 aaKnown RBP eCLIP9.33□□□□□ -0.927e-6■■■■□ 23.7
VPS13B-206ENST00000496144 STX17P56962 302 aa9.33□□□□□ -0.92
VPS13B-206ENST00000496144 MXD4Q14582 209 aaPredicted RBP9.33□□□□□ -0.92
VPS13B-206ENST00000496144 TCP11X2Q5H9J9 407 aa9.33□□□□□ -0.92
VPS13B-206ENST00000496144 USP37Q86T82 979 aa9.33□□□□□ -0.92
VPS13B-206ENST00000496144 BAG1Q99933 345 aaPredicted RBP9.33□□□□□ -0.92
VPS13B-206ENST00000496144 AGO4Q9HCK5 861 aaKnown RBP9.33□□□□□ -0.92
VPS13B-206ENST00000496144 SPG21Q9NZD8 308 aa9.33□□□□□ -0.92
VPS13B-206ENST00000496144 CCDC169A6NNP5 214 aa9.33□□□□□ -0.92
VPS13B-206ENST00000496144 RHOBTB3O94955 611 aa9.33□□□□□ -0.92
VPS13B-206ENST00000496144 F2P00734 622 aa9.33□□□□□ -0.92
VPS13B-206ENST00000496144 CRYBB1P53674 252 aaPredicted RBP9.33□□□□□ -0.92
VPS13B-206ENST00000496144 WDR5P61964 334 aaKnown RBP9.33□□□□□ -0.92
VPS13B-206ENST00000496144 UBE3AQ05086 875 aa9.33□□□□□ -0.92
VPS13B-206ENST00000496144 KLHL10Q6JEL2 608 aa9.33□□□□□ -0.92
VPS13B-206ENST00000496144 ZNF410Q86VK4 478 aa9.33□□□□□ -0.92
VPS13B-206ENST00000496144 IGSF22Q8N9C0 903 aa9.33□□□□□ -0.92
VPS13B-206ENST00000496144 PURBQ96QR8 312 aaKnown RBP9.33□□□□□ -0.92
VPS13B-206ENST00000496144 GPR20Q99678 358 aa9.33□□□□□ -0.92
VPS13B-206ENST00000496144 PRCPP42785 496 aa9.33□□□□□ -0.92
VPS13B-206ENST00000496144 REXO1L1PQ8IX06 675 aa9.33□□□□□ -0.92
VPS13B-206ENST00000496144 C7orf25Q9BPX7 421 aa9.33□□□□□ -0.92
VPS13B-206ENST00000496144 LRRIQ4A6NIV6 560 aa9.33□□□□□ -0.92
VPS13B-206ENST00000496144 ARHGAP6O43182 974 aa9.33□□□□□ -0.92
VPS13B-206ENST00000496144 FAM13AO94988 1023 aa9.33□□□□□ -0.92
VPS13B-206ENST00000496144 P4HBP07237 508 aaKnown RBP9.33□□□□□ -0.92
VPS13B-206ENST00000496144 PLCG1P19174 1290 aa9.33□□□□□ -0.92
VPS13B-206ENST00000496144 CDC25AP30304 524 aa9.33□□□□□ -0.92
VPS13B-206ENST00000496144 COBLL1Q53SF7 1204 aa9.33□□□□□ -0.92
VPS13B-206ENST00000496144 UBE2Q1Q7Z7E8 422 aa9.33□□□□□ -0.92
VPS13B-206ENST00000496144 ADSSL1Q8N142 457 aa9.33□□□□□ -0.92
VPS13B-206ENST00000496144 ZNF592Q92610 1267 aa9.33□□□□□ -0.92
VPS13B-206ENST00000496144 NAA15Q9BXJ9 866 aaKnown RBP9.33□□□□□ -0.92
VPS13B-206ENST00000496144 EDIL3O43854 480 aa9.33□□□□□ -0.92
VPS13B-206ENST00000496144 STX10O60499 249 aa9.33□□□□□ -0.92
VPS13B-206ENST00000496144 KLRC2P26717 231 aa9.33□□□□□ -0.92
VPS13B-206ENST00000496144 RBL2Q08999 1139 aa9.33□□□□□ -0.92
VPS13B-206ENST00000496144 ATAT1Q5SQI0 421 aa9.33□□□□□ -0.92
VPS13B-206ENST00000496144 THAP9Q9H5L6 903 aa9.33□□□□□ -0.92
VPS13B-206ENST00000496144 CHST12Q9NRB3 414 aa9.33□□□□□ -0.92
VPS13B-206ENST00000496144 DZANK1Q9NVP4 752 aa9.33□□□□□ -0.92
VPS13B-206ENST00000496144 AKR1B15C9JRZ8 316 aaPredicted RBP9.32□□□□□ -0.92
VPS13B-206ENST00000496144 DPYSL4O14531 572 aa9.32□□□□□ -0.92
VPS13B-206ENST00000496144 N4BP3O15049 544 aa9.32□□□□□ -0.92
VPS13B-206ENST00000496144 TEX33O43247 280 aa9.32□□□□□ -0.92
VPS13B-206ENST00000496144 TOGARAM2Q6ZUX3 1019 aa9.32□□□□□ -0.92
VPS13B-206ENST00000496144 METTL23Q86XA0 190 aa9.32□□□□□ -0.92
VPS13B-206ENST00000496144 ADAM2Q99965 735 aa9.32□□□□□ -0.92
VPS13B-206ENST00000496144 TMEM117Q9H0C3 514 aa9.32□□□□□ -0.92
VPS13B-206ENST00000496144 EXOC7Q9UPT5 735 aa9.32□□□□□ -0.92
VPS13B-206ENST00000496144 MYH7BA7E2Y1 1941 aa9.32□□□□□ -0.92
VPS13B-206ENST00000496144 KCNJ18B7U540 433 aa9.32□□□□□ -0.92
VPS13B-206ENST00000496144 QARSP47897 775 aaKnown RBP9.32□□□□□ -0.92
VPS13B-206ENST00000496144 KCNJ12Q14500 433 aa9.32□□□□□ -0.92
VPS13B-206ENST00000496144 GRIN2CQ14957 1233 aa9.32□□□□□ -0.92
VPS13B-206ENST00000496144 KRT31Q15323 416 aa9.32□□□□□ -0.92
VPS13B-206ENST00000496144 MTHFD1LQ6UB35 978 aa9.32□□□□□ -0.92
VPS13B-206ENST00000496144 MCPH1Q8NEM0 835 aa9.32□□□□□ -0.92
VPS13B-206ENST00000496144 RAB23Q9ULC3 237 aa9.32□□□□□ -0.92
VPS13B-206ENST00000496144 PPP2R2CQ9Y2T4 447 aa9.32□□□□□ -0.92
VPS13B-206ENST00000496144 NUB1Q9Y5A7 615 aa9.32□□□□□ -0.92
VPS13B-206ENST00000496144 PCDHA2Q9Y5H9 948 aa9.32□□□□□ -0.92
VPS13B-206ENST00000496144 GRXCR1A8MXD5 290 aa9.32□□□□□ -0.92
VPS13B-206ENST00000496144 ADCY6O43306 1168 aa9.32□□□□□ -0.92
VPS13B-206ENST00000496144 ZSCAN12O43309 604 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms