RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 PON1P27169 355 aa20.16■□□□□ 0.82
TSPAN4-212ENST00000494815 HUNKP57058 714 aa20.16■□□□□ 0.82
TSPAN4-212ENST00000494815 PLPPR4Q7Z2D5 763 aa20.16■□□□□ 0.82
TSPAN4-212ENST00000494815 CCDC42Q96M95 316 aa20.16■□□□□ 0.82
TSPAN4-212ENST00000494815 CBWD1Q9BRT8 395 aa20.16■□□□□ 0.82
TSPAN4-212ENST00000494815 KIFC3Q9BVG8 833 aa20.16■□□□□ 0.82
TSPAN4-212ENST00000494815 HSPBP1Q9NZL4 362 aa20.16■□□□□ 0.82
TSPAN4-212ENST00000494815 VPS18Q9P253 973 aa20.16■□□□□ 0.82
TSPAN4-212ENST00000494815 EMSYQ7Z589 1322 aa20.15■□□□□ 0.82
TSPAN4-212ENST00000494815 TXNP10599 105 aaKnown RBP20.15■□□□□ 0.82
TSPAN4-212ENST00000494815 KRT13P13646 458 aa20.15■□□□□ 0.82
TSPAN4-212ENST00000494815 WHAMMP3Q1A5X7 153 aa20.15■□□□□ 0.82
TSPAN4-212ENST00000494815 HSDL1Q3SXM5 330 aa20.15■□□□□ 0.82
TSPAN4-212ENST00000494815 CHADLQ6NUI6 762 aa20.15■□□□□ 0.82
TSPAN4-212ENST00000494815 DPY19L2P1Q6NXN4 242 aa20.15■□□□□ 0.82
TSPAN4-212ENST00000494815 SLC35F6Q8N357 371 aa20.15■□□□□ 0.82
TSPAN4-212ENST00000494815 ABCB6Q9NP58 842 aa20.15■□□□□ 0.82
TSPAN4-212ENST00000494815 VTA1Q9NP79 307 aa20.15■□□□□ 0.82
TSPAN4-212ENST00000494815 NLRC4Q9NPP4 1024 aa20.15■□□□□ 0.82
TSPAN4-212ENST00000494815 ARHGAP20Q9P2F6 1191 aa20.15■□□□□ 0.82
TSPAN4-212ENST00000494815 REXO2Q9Y3B8 237 aaKnown RBP20.15■□□□□ 0.82
TSPAN4-212ENST00000494815 PLXNB2O15031 1838 aa20.15■□□□□ 0.82
TSPAN4-212ENST00000494815 ADGRA3Q8IWK6 1321 aa20.15■□□□□ 0.82
TSPAN4-212ENST00000494815 MCM3APO60318 1980 aa20.15■□□□□ 0.82
TSPAN4-212ENST00000494815 TISP43B9A030 160 aa20.15■□□□□ 0.82
TSPAN4-212ENST00000494815 FMO5P49326 533 aa20.15■□□□□ 0.82
TSPAN4-212ENST00000494815 SLC26A2P50443 739 aa20.15■□□□□ 0.82
TSPAN4-212ENST00000494815 KLHDC7AQ5VTJ3 777 aa20.15■□□□□ 0.82
TSPAN4-212ENST00000494815 ZNF662Q6ZS27 426 aa20.15■□□□□ 0.82
TSPAN4-212ENST00000494815 SPATA33Q96N06 139 aa20.15■□□□□ 0.82
TSPAN4-212ENST00000494815 NAPGQ99747 312 aaPredicted RBP20.15■□□□□ 0.82
TSPAN4-212ENST00000494815 GCNT4Q9P109 453 aa20.15■□□□□ 0.82
TSPAN4-212ENST00000494815 MYO1AQ9UBC5 1043 aa20.15■□□□□ 0.82
TSPAN4-212ENST00000494815 MYO6Q9UM54 1294 aa20.15■□□□□ 0.82
TSPAN4-212ENST00000494815 TUBBP07437 444 aa20.14■□□□□ 0.81
TSPAN4-212ENST00000494815 UCHL3P15374 230 aa20.14■□□□□ 0.81
TSPAN4-212ENST00000494815 SLC9A1P19634 815 aa20.14■□□□□ 0.81
TSPAN4-212ENST00000494815 CNGA1P29973 690 aa20.14■□□□□ 0.81
TSPAN4-212ENST00000494815 ARL2P36404 184 aa20.14■□□□□ 0.81
TSPAN4-212ENST00000494815 BRDTQ58F21 947 aaPredicted RBP20.14■□□□□ 0.81
TSPAN4-212ENST00000494815 SFMBT2Q5VUG0 894 aa20.14■□□□□ 0.81
TSPAN4-212ENST00000494815 GLG1Q92896 1179 aa20.14■□□□□ 0.81
TSPAN4-212ENST00000494815 SSU72P8A0A1W2PR75 194 aa20.14■□□□□ 0.81
TSPAN4-212ENST00000494815 MAPK4P31152 587 aa20.14■□□□□ 0.81
TSPAN4-212ENST00000494815 NAMPTP43490 491 aa20.14■□□□□ 0.81
TSPAN4-212ENST00000494815 MCCD1P59942 119 aaPredicted RBP20.14■□□□□ 0.81
TSPAN4-212ENST00000494815 GRB14Q14449 540 aa20.14■□□□□ 0.81
TSPAN4-212ENST00000494815 LEKR1Q6ZMV7 388 aa20.14■□□□□ 0.81
TSPAN4-212ENST00000494815 GPR142Q7Z601 462 aa20.14■□□□□ 0.81
TSPAN4-212ENST00000494815 PCIF1Q9H4Z3 704 aa20.14■□□□□ 0.81
TSPAN4-212ENST00000494815 CTAGE15A4D2H0 777 aa20.13■□□□□ 0.81
TSPAN4-212ENST00000494815 CTAGE8P0CG41 777 aa20.13■□□□□ 0.81
TSPAN4-212ENST00000494815 ARHGAP25P42331 645 aa20.13■□□□□ 0.81
TSPAN4-212ENST00000494815 MAMDC4Q6UXC1 1216 aa20.13■□□□□ 0.81
TSPAN4-212ENST00000494815 CTAGE6Q86UF2 777 aa20.13■□□□□ 0.81
TSPAN4-212ENST00000494815 CTAGE4Q8IX94 777 aa20.13■□□□□ 0.81
TSPAN4-212ENST00000494815 EXOC8Q8IYI6 725 aa20.13■□□□□ 0.81
TSPAN4-212ENST00000494815 RASSF4Q9H2L5 321 aa20.13■□□□□ 0.81
TSPAN4-212ENST00000494815 HAUS4Q9H6D7 363 aa20.13■□□□□ 0.81
TSPAN4-212ENST00000494815 PDGFCQ9NRA1 345 aa20.13■□□□□ 0.81
TSPAN4-212ENST00000494815 AIPL1Q9NZN9 384 aa20.13■□□□□ 0.81
TSPAN4-212ENST00000494815 DAAM1Q9Y4D1 1078 aa20.13■□□□□ 0.81
TSPAN4-212ENST00000494815 PLXNA1Q9UIW2 1896 aa20.13■□□□□ 0.81
TSPAN4-212ENST00000494815 MYO1CO00159 1063 aa20.12■□□□□ 0.81
TSPAN4-212ENST00000494815 MAFO75444 373 aaPredicted RBP20.12■□□□□ 0.81
TSPAN4-212ENST00000494815 LCA5LO95447 670 aa20.12■□□□□ 0.81
TSPAN4-212ENST00000494815 ADSSP30520 456 aa20.12■□□□□ 0.81
TSPAN4-212ENST00000494815 SLC9C1Q4G0N8 1177 aa20.12■□□□□ 0.81
TSPAN4-212ENST00000494815 ATP8B4Q8TF62 1192 aa20.12■□□□□ 0.81
TSPAN4-212ENST00000494815 TMEM143Q96AN5 459 aa20.12■□□□□ 0.81
TSPAN4-212ENST00000494815 RBM47A0AV96 593 aaKnown RBP20.12■□□□□ 0.81
TSPAN4-212ENST00000494815 ANKRD63C9JTQ0 380 aa20.12■□□□□ 0.81
TSPAN4-212ENST00000494815 GAS2O43903 313 aaKnown RBP20.12■□□□□ 0.81
TSPAN4-212ENST00000494815 N4BP1O75113 896 aaKnown RBP20.12■□□□□ 0.81
TSPAN4-212ENST00000494815 SERPING1P05155 500 aa20.12■□□□□ 0.81
TSPAN4-212ENST00000494815 IVLP07476 585 aa20.12■□□□□ 0.81
TSPAN4-212ENST00000494815 ACTN1P12814 892 aa20.12■□□□□ 0.81
TSPAN4-212ENST00000494815 GLRA2P23416 452 aa20.12■□□□□ 0.81
TSPAN4-212ENST00000494815 VAMP7P51809 220 aa20.12■□□□□ 0.81
TSPAN4-212ENST00000494815 VSNL1P62760 191 aa20.12■□□□□ 0.81
TSPAN4-212ENST00000494815 APBA1Q02410 837 aa20.12■□□□□ 0.81
TSPAN4-212ENST00000494815 SPA17Q15506 151 aa20.12■□□□□ 0.81
TSPAN4-212ENST00000494815 HGSNATQ68CP4 663 aa20.12■□□□□ 0.81
TSPAN4-212ENST00000494815 TAPT1Q6NXT6 567 aa20.12■□□□□ 0.81
TSPAN4-212ENST00000494815 PLEKHH3Q7Z736 793 aa20.12■□□□□ 0.81
TSPAN4-212ENST00000494815 SRLQ86TD4 932 aa20.12■□□□□ 0.81
TSPAN4-212ENST00000494815 RDH13Q8NBN7 331 aa20.12■□□□□ 0.81
TSPAN4-212ENST00000494815 DEF6Q9H4E7 631 aa20.12■□□□□ 0.81
TSPAN4-212ENST00000494815 SMARCAD1Q9H4L7 1026 aa20.12■□□□□ 0.81
TSPAN4-212ENST00000494815 SIX2Q9NPC8 291 aa20.12■□□□□ 0.81
TSPAN4-212ENST00000494815 TRPM7Q96QT4 1865 aa20.12■□□□□ 0.81
TSPAN4-212ENST00000494815 HNRNPDLO14979 420 aaKnown RBP20.11■□□□□ 0.81
TSPAN4-212ENST00000494815 P4HA2O15460 535 aa20.11■□□□□ 0.81
TSPAN4-212ENST00000494815 RPS6KA5O75582 802 aa20.11■□□□□ 0.81
TSPAN4-212ENST00000494815 PLEKP08567 350 aaPredicted RBP20.11■□□□□ 0.81
TSPAN4-212ENST00000494815 RHOXF2BP0C7M4 288 aa20.11■□□□□ 0.81
TSPAN4-212ENST00000494815 TRIM49P0CI25 452 aa20.11■□□□□ 0.81
TSPAN4-212ENST00000494815 TRIM49CP0CI26 452 aa20.11■□□□□ 0.81
TSPAN4-212ENST00000494815 EIF4A3P38919 411 aaKnown RBP20.11■□□□□ 0.81
TSPAN4-212ENST00000494815 KIF11P52732 1056 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms