RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 POLD4Q9HCU8 107 aa17.32■□□□□ 0.36
LIMS2-216ENST00000494613 TBC1D13Q9NVG8 400 aa17.32■□□□□ 0.36
LIMS2-216ENST00000494613 CLEC1BQ9P126 229 aa17.32■□□□□ 0.36
LIMS2-216ENST00000494613 INPP5FQ9Y2H2 1132 aa17.32■□□□□ 0.36
LIMS2-216ENST00000494613 GALTP07902 379 aa17.31■□□□□ 0.36
LIMS2-216ENST00000494613 CYP11B2P19099 503 aa17.31■□□□□ 0.36
LIMS2-216ENST00000494613 NCLP19338 710 aaKnown RBP17.31■□□□□ 0.36
LIMS2-216ENST00000494613 RNASELQ05823 741 aaKnown RBP17.31■□□□□ 0.36
LIMS2-216ENST00000494613 AMHR2Q16671 573 aa17.31■□□□□ 0.36
LIMS2-216ENST00000494613 ZNF280BQ86YH2 543 aa17.31■□□□□ 0.36
LIMS2-216ENST00000494613 IGSF22Q8N9C0 903 aa17.31■□□□□ 0.36
LIMS2-216ENST00000494613 CNNM3Q8NE01 707 aa17.31■□□□□ 0.36
LIMS2-216ENST00000494613 MCPH1Q8NEM0 835 aa17.31■□□□□ 0.36
LIMS2-216ENST00000494613 MSLNLQ96KJ4 702 aa17.31■□□□□ 0.36
LIMS2-216ENST00000494613 TCF25Q9BQ70 676 aa17.31■□□□□ 0.36
LIMS2-216ENST00000494613 EIF2AQ9BY44 585 aaKnown RBP17.31■□□□□ 0.36
LIMS2-216ENST00000494613 CSRNP2Q9H175 543 aa17.31■□□□□ 0.36
LIMS2-216ENST00000494613 NGRNQ9NPE2 291 aaKnown RBP17.31■□□□□ 0.36
LIMS2-216ENST00000494613 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.31■□□□□ 0.36
LIMS2-216ENST00000494613 KANSL3Q9P2N6 904 aa17.31■□□□□ 0.36
LIMS2-216ENST00000494613 KIAA1024Q9UPX6 916 aa17.31■□□□□ 0.36
LIMS2-216ENST00000494613 SMC3Q9UQE7 1217 aa17.31■□□□□ 0.36
LIMS2-216ENST00000494613 FAM50BQ9Y247 325 aa17.31■□□□□ 0.36
LIMS2-216ENST00000494613 KIAA1671Q9BY89 1806 aa17.31■□□□□ 0.36
LIMS2-216ENST00000494613 ARHGEF35A5YM69 484 aa17.3■□□□□ 0.36
LIMS2-216ENST00000494613 HIDE1A8MVS5 230 aa17.3■□□□□ 0.36
LIMS2-216ENST00000494613 H3BQV1 296 aa17.3■□□□□ 0.36
LIMS2-216ENST00000494613 LAD1O00515 517 aa17.3■□□□□ 0.36
LIMS2-216ENST00000494613 MBTPS2O43462 519 aa17.3■□□□□ 0.36
LIMS2-216ENST00000494613 ZC3H11AO75152 810 aaKnown RBP eCLIP17.3■□□□□ 0.36
LIMS2-216ENST00000494613 TBX10O75333 385 aa17.3■□□□□ 0.36
LIMS2-216ENST00000494613 DDHD2O94830 711 aa17.3■□□□□ 0.36
LIMS2-216ENST00000494613 CXCL14O95715 111 aa17.3■□□□□ 0.36
LIMS2-216ENST00000494613 ALDH2P05091 517 aa17.3■□□□□ 0.36
LIMS2-216ENST00000494613 ITGA4P13612 1032 aa17.3■□□□□ 0.36
LIMS2-216ENST00000494613 ARF4P18085 180 aaPredicted RBP17.3■□□□□ 0.36
LIMS2-216ENST00000494613 CDC25AP30304 524 aa17.3■□□□□ 0.36
LIMS2-216ENST00000494613 NDUFV1P49821 464 aa17.3■□□□□ 0.36
LIMS2-216ENST00000494613 DUSP6Q16828 381 aa17.3■□□□□ 0.36
LIMS2-216ENST00000494613 PLPP4Q5VZY2 271 aa17.3■□□□□ 0.36
LIMS2-216ENST00000494613 LARP1BQ659C4 914 aaKnown RBP17.3■□□□□ 0.36
LIMS2-216ENST00000494613 NOTUMQ6P988 496 aa17.3■□□□□ 0.36
LIMS2-216ENST00000494613 DTHD1Q6ZMT9 781 aa17.3■□□□□ 0.36
LIMS2-216ENST00000494613 GJD3Q8N144 294 aa17.3■□□□□ 0.36
LIMS2-216ENST00000494613 MRPL43Q8N983 215 aaKnown RBP17.3■□□□□ 0.36
LIMS2-216ENST00000494613 KHSRPQ92945 711 aaKnown RBP eCLIP17.3■□□□□ 0.36
LIMS2-216ENST00000494613 EPHX3Q9H6B9 360 aa17.3■□□□□ 0.36
LIMS2-216ENST00000494613 RSAD1Q9HA92 442 aa17.3■□□□□ 0.36
LIMS2-216ENST00000494613 ENTPD7Q9NQZ7 604 aa17.3■□□□□ 0.36
LIMS2-216ENST00000494613 DNAJB4Q9UDY4 337 aa17.3■□□□□ 0.36
LIMS2-216ENST00000494613 CD207Q9UJ71 328 aa17.3■□□□□ 0.36
LIMS2-216ENST00000494613 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.3■□□□□ 0.36
LIMS2-216ENST00000494613 STK24Q9Y6E0 443 aa17.3■□□□□ 0.36
LIMS2-216ENST00000494613 MUC3AQ02505 3323 aa17.29■□□□□ 0.36
LIMS2-216ENST00000494613 NCOR1O75376 2440 aa17.29■□□□□ 0.36
LIMS2-216ENST00000494613 PLXNA4Q9HCM2 1894 aa17.29■□□□□ 0.36
LIMS2-216ENST00000494613 BDP1A6H8Y1 2624 aa17.29■□□□□ 0.36
LIMS2-216ENST00000494613 A0A1B0GUA9 196 aa17.29■□□□□ 0.36
LIMS2-216ENST00000494613 LRRIQ4A6NIV6 560 aa17.29■□□□□ 0.36
LIMS2-216ENST00000494613 EYA4O95677 639 aa17.29■□□□□ 0.36
LIMS2-216ENST00000494613 GLP2RO95838 553 aa17.29■□□□□ 0.36
LIMS2-216ENST00000494613 PRPHP41219 470 aa17.29■□□□□ 0.36
LIMS2-216ENST00000494613 RBM10P98175 930 aaKnown RBP17.29■□□□□ 0.36
LIMS2-216ENST00000494613 RILPL1Q5EBL4 403 aa17.29■□□□□ 0.36
LIMS2-216ENST00000494613 HAUS3Q68CZ6 603 aa17.29■□□□□ 0.36
LIMS2-216ENST00000494613 URGCPQ8TCY9 931 aa17.29■□□□□ 0.36
LIMS2-216ENST00000494613 IGSF21Q96ID5 467 aa17.29■□□□□ 0.36
LIMS2-216ENST00000494613 CDCA3Q99618 268 aaPredicted RBP17.29■□□□□ 0.36
LIMS2-216ENST00000494613 RAB34Q9BZG1 259 aa17.29■□□□□ 0.36
LIMS2-216ENST00000494613 GBP3Q9H0R5 595 aa17.29■□□□□ 0.36
LIMS2-216ENST00000494613 BHMT2Q9H2M3 363 aa17.29■□□□□ 0.36
LIMS2-216ENST00000494613 UBN1Q9NPG3 1134 aa17.29■□□□□ 0.36
LIMS2-216ENST00000494613 DDX19AQ9NUU7 478 aaKnown RBP17.29■□□□□ 0.36
LIMS2-216ENST00000494613 HES2Q9Y543 173 aa17.29■□□□□ 0.36
LIMS2-216ENST00000494613 IPPQ9Y573 584 aa17.29■□□□□ 0.36
LIMS2-216ENST00000494613 CNTNAP2Q9UHC6 1331 aa17.28■□□□□ 0.36
LIMS2-216ENST00000494613 PP2D1A8MPX8 630 aa17.28■□□□□ 0.36
LIMS2-216ENST00000494613 B4GALT5O43286 388 aa17.28■□□□□ 0.36
LIMS2-216ENST00000494613 B4GALT3O60512 393 aa17.28■□□□□ 0.36
LIMS2-216ENST00000494613 POMCP01189 267 aa17.28■□□□□ 0.36
LIMS2-216ENST00000494613 COASYQ13057 564 aa17.28■□□□□ 0.36
LIMS2-216ENST00000494613 KCNC3Q14003 757 aa17.28■□□□□ 0.36
LIMS2-216ENST00000494613 SMAD2Q15796 467 aaKnown RBP17.28■□□□□ 0.36
LIMS2-216ENST00000494613 DDX53Q86TM3 631 aaKnown RBP17.28■□□□□ 0.36
LIMS2-216ENST00000494613 TMEM173Q86WV6 379 aaPredicted RBP17.28■□□□□ 0.36
LIMS2-216ENST00000494613 CDR2LQ86X02 465 aaPredicted RBP17.28■□□□□ 0.36
LIMS2-216ENST00000494613 VPS52Q8N1B4 723 aa17.28■□□□□ 0.36
LIMS2-216ENST00000494613 VN1R2Q8NFZ6 395 aa17.28■□□□□ 0.36
LIMS2-216ENST00000494613 BSNDQ8WZ55 320 aa17.28■□□□□ 0.36
LIMS2-216ENST00000494613 CCDC51Q96ER9 411 aa17.28■□□□□ 0.36
LIMS2-216ENST00000494613 TMEM169Q96HH4 297 aa17.28■□□□□ 0.36
LIMS2-216ENST00000494613 BACH2Q9BYV9 841 aa17.28■□□□□ 0.36
LIMS2-216ENST00000494613 FZD8Q9H461 694 aa17.28■□□□□ 0.36
LIMS2-216ENST00000494613 MIOSQ9NXC5 875 aa17.28■□□□□ 0.36
LIMS2-216ENST00000494613 PRKAG3Q9UGI9 489 aa17.28■□□□□ 0.36
LIMS2-216ENST00000494613 BARX2Q9UMQ3 279 aaPredicted RBP17.28■□□□□ 0.36
LIMS2-216ENST00000494613 DNM3Q9UQ16 869 aa17.28■□□□□ 0.36
LIMS2-216ENST00000494613 ATG2AQ2TAZ0 1938 aa17.27■□□□□ 0.36
LIMS2-216ENST00000494613 CARNS1A5YM72 827 aa17.27■□□□□ 0.36
LIMS2-216ENST00000494613 C2orf71A6NGG8 1288 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms