RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 KRT17Q04695 432 aa36.81■■■■□ 3.48
CBX4-203ENST00000494546 CUL4AQ13619 759 aa36.81■■■■□ 3.48
CBX4-203ENST00000494546 KRT79Q5XKE5 535 aa36.81■■■■□ 3.48
CBX4-203ENST00000494546 AGMOQ6ZNB7 445 aa36.81■■■■□ 3.48
CBX4-203ENST00000494546 MRPL10Q7Z7H8 261 aaKnown RBP36.81■■■■□ 3.48
CBX4-203ENST00000494546 BHMT2Q9H2M3 363 aa36.81■■■■□ 3.48
CBX4-203ENST00000494546 TBC1D13Q9NVG8 400 aa36.81■■■■□ 3.48
CBX4-203ENST00000494546 LZTS1Q9Y250 596 aa36.81■■■■□ 3.48
CBX4-203ENST00000494546 LINC01565O15544 149 aa36.8■■■■□ 3.48
CBX4-203ENST00000494546 ZC3H11AO75152 810 aaKnown RBP eCLIP36.8■■■■□ 3.48
CBX4-203ENST00000494546 CDC25AP30304 524 aa36.8■■■■□ 3.48
CBX4-203ENST00000494546 LTBRP36941 435 aa36.8■■■■□ 3.48
CBX4-203ENST00000494546 ALDH7A1P49419 539 aaKnown RBP36.8■■■■□ 3.48
CBX4-203ENST00000494546 BCAR1P56945 870 aa36.8■■■■□ 3.48
CBX4-203ENST00000494546 RNASELQ05823 741 aaKnown RBP36.8■■■■□ 3.48
CBX4-203ENST00000494546 SLC39A11Q8N1S5 342 aa36.8■■■■□ 3.48
CBX4-203ENST00000494546 EIF2AQ9BY44 585 aaKnown RBP36.8■■■■□ 3.48
CBX4-203ENST00000494546 RSAD1Q9HA92 442 aa36.8■■■■□ 3.48
CBX4-203ENST00000494546 NT5C1B-RDH14C9J2C7 533 aa36.79■■■■□ 3.48
CBX4-203ENST00000494546 ATP2C1P98194 919 aaPredicted RBP36.79■■■■□ 3.48
CBX4-203ENST00000494546 DLX2Q07687 328 aaPredicted RBP36.79■■■■□ 3.48
CBX4-203ENST00000494546 AMHR2Q16671 573 aa36.79■■■■□ 3.48
CBX4-203ENST00000494546 URGCPQ8TCY9 931 aa36.79■■■■□ 3.48
CBX4-203ENST00000494546 CCDC51Q96ER9 411 aa36.79■■■■□ 3.48
CBX4-203ENST00000494546 CSRNP2Q9H175 543 aa36.79■■■■□ 3.48
CBX4-203ENST00000494546 TLE6Q9H808 572 aa36.79■■■■□ 3.48
CBX4-203ENST00000494546 B4GALT5O43286 388 aa36.78■■■■□ 3.48
CBX4-203ENST00000494546 ARF4P18085 180 aaPredicted RBP36.78■■■■□ 3.48
CBX4-203ENST00000494546 NCLP19338 710 aaKnown RBP36.78■■■■□ 3.48
CBX4-203ENST00000494546 ADAM15Q13444 863 aa36.78■■■■□ 3.48
CBX4-203ENST00000494546 PUS10Q3MIT2 529 aaKnown RBP36.78■■■■□ 3.48
CBX4-203ENST00000494546 PLPP4Q5VZY2 271 aa36.78■■■■□ 3.48
CBX4-203ENST00000494546 SMG8Q8ND04 991 aaKnown RBP36.78■■■■□ 3.48
CBX4-203ENST00000494546 CNNM3Q8NE01 707 aa36.78■■■■□ 3.48
CBX4-203ENST00000494546 TCF25Q9BQ70 676 aa36.78■■■■□ 3.48
CBX4-203ENST00000494546 GBP3Q9H0R5 595 aa36.78■■■■□ 3.48
CBX4-203ENST00000494546 ENTPD7Q9NQZ7 604 aa36.78■■■■□ 3.48
CBX4-203ENST00000494546 IPPQ9Y573 584 aa36.78■■■■□ 3.48
CBX4-203ENST00000494546 FSCN2O14926 492 aa36.77■■■■□ 3.48
CBX4-203ENST00000494546 ITGA4P13612 1032 aa36.77■■■■□ 3.48
CBX4-203ENST00000494546 IL9P15248 144 aa36.77■■■■□ 3.48
CBX4-203ENST00000494546 CLUL1Q15846 466 aa36.77■■■■□ 3.48
CBX4-203ENST00000494546 PDE12Q6L8Q7 609 aaKnown RBP36.77■■■■□ 3.48
CBX4-203ENST00000494546 ZBTB8OSQ8IWT0 167 aa36.77■■■■□ 3.48
CBX4-203ENST00000494546 BSNDQ8WZ55 320 aa36.77■■■■□ 3.48
CBX4-203ENST00000494546 NRDE2Q9H7Z3 1164 aa36.77■■■■□ 3.48
CBX4-203ENST00000494546 POLD4Q9HCU8 107 aa36.77■■■■□ 3.48
CBX4-203ENST00000494546 CNTNAP2Q9UHC6 1331 aa36.77■■■■□ 3.48
CBX4-203ENST00000494546 GRXCR2A6NFK2 248 aa36.76■■■■□ 3.48
CBX4-203ENST00000494546 PER2O15055 1255 aa36.76■■■■□ 3.48
CBX4-203ENST00000494546 TBX10O75333 385 aa36.76■■■■□ 3.48
CBX4-203ENST00000494546 NDUFV1P49821 464 aa36.76■■■■□ 3.48
CBX4-203ENST00000494546 EFHBQ8N7U6 833 aa36.76■■■■□ 3.48
CBX4-203ENST00000494546 TRIM6Q9C030 488 aaPredicted RBP36.76■■■■□ 3.48
CBX4-203ENST00000494546 DNM3Q9UQ16 869 aa36.76■■■■□ 3.48
CBX4-203ENST00000494546 E9PMD0 336 aa36.75■■■■□ 3.47
CBX4-203ENST00000494546 ZRSR1Q15695 479 aaKnown RBP36.75■■■■□ 3.47
CBX4-203ENST00000494546 CDCA2Q69YH5 1023 aaPredicted RBP36.75■■■■□ 3.47
CBX4-203ENST00000494546 CDR2LQ86X02 465 aaPredicted RBP36.75■■■■□ 3.47
CBX4-203ENST00000494546 TMEM169Q96HH4 297 aa36.75■■■■□ 3.47
CBX4-203ENST00000494546 MMTAG2Q9BU76 263 aaKnown RBP36.75■■■■□ 3.47
CBX4-203ENST00000494546 C2orf40Q9H1Z8 148 aa36.75■■■■□ 3.47
CBX4-203ENST00000494546 HES2Q9Y543 173 aa36.75■■■■□ 3.47
CBX4-203ENST00000494546 VPS37CA5D8V6 355 aaPredicted RBP36.74■■■■□ 3.47
CBX4-203ENST00000494546 VWA3AA6NCI4 1184 aa36.74■■■■□ 3.47
CBX4-203ENST00000494546 AFF1P51825 1210 aaKnown RBP36.74■■■■□ 3.47
CBX4-203ENST00000494546 TMC7Q7Z402 723 aa36.74■■■■□ 3.47
CBX4-203ENST00000494546 APOL6Q9BWW8 343 aa36.74■■■■□ 3.47
CBX4-203ENST00000494546 RNF39Q9H2S5 420 aa36.74■■■■□ 3.47
CBX4-203ENST00000494546 UBN1Q9NPG3 1134 aa36.74■■■■□ 3.47
CBX4-203ENST00000494546 PRMT7Q9NVM4 692 aaPredicted RBP36.74■■■■□ 3.47
CBX4-203ENST00000494546 EYA4O95677 639 aa36.73■■■■□ 3.47
CBX4-203ENST00000494546 POMCP01189 267 aa36.73■■■■□ 3.47
CBX4-203ENST00000494546 ZNF280BQ86YH2 543 aa36.73■■■■□ 3.47
CBX4-203ENST00000494546 DEPTORQ8TB45 409 aa36.73■■■■□ 3.47
CBX4-203ENST00000494546 NGRNQ9NPE2 291 aaKnown RBP36.73■■■■□ 3.47
CBX4-203ENST00000494546 KANSL3Q9P2N6 904 aa36.73■■■■□ 3.47
CBX4-203ENST00000494546 DNAJB4Q9UDY4 337 aa36.73■■■■□ 3.47
CBX4-203ENST00000494546 NPTXRO95502 500 aa36.72■■■■□ 3.47
CBX4-203ENST00000494546 GALTP07902 379 aa36.72■■■■□ 3.47
CBX4-203ENST00000494546 LIG1P18858 919 aa36.72■■■■□ 3.47
CBX4-203ENST00000494546 NAMPTP43490 491 aa36.72■■■■□ 3.47
CBX4-203ENST00000494546 PPP2R5AQ15172 486 aa36.72■■■■□ 3.47
CBX4-203ENST00000494546 SLC27A1Q6PCB7 646 aa36.72■■■■□ 3.47
CBX4-203ENST00000494546 PPP4R3CPQ6ZMV5 832 aa36.72■■■■□ 3.47
CBX4-203ENST00000494546 BRAPQ7Z569 592 aa36.72■■■■□ 3.47
CBX4-203ENST00000494546 TMEM173Q86WV6 379 aaPredicted RBP36.72■■■■□ 3.47
CBX4-203ENST00000494546 IFT74Q96LB3 600 aa36.72■■■■□ 3.47
CBX4-203ENST00000494546 PRIMPOLQ96LW4 560 aa36.72■■■■□ 3.47
CBX4-203ENST00000494546 FAM193BQ96PV7 902 aaPredicted RBP36.72■■■■□ 3.47
CBX4-203ENST00000494546 FAM50BQ9Y247 325 aa36.72■■■■□ 3.47
CBX4-203ENST00000494546 B4GALT3O60512 393 aa36.71■■■■□ 3.47
CBX4-203ENST00000494546 HACE1Q8IYU2 909 aa36.71■■■■□ 3.47
CBX4-203ENST00000494546 KIFAP3Q92845 792 aa36.71■■■■□ 3.47
CBX4-203ENST00000494546 FZD8Q9H461 694 aa36.71■■■■□ 3.47
CBX4-203ENST00000494546 NXF3Q9H4D5 531 aaKnown RBP36.71■■■■□ 3.47
CBX4-203ENST00000494546 A0A1B0GUA9 196 aa36.7■■■■□ 3.47
CBX4-203ENST00000494546 CARNS1A5YM72 827 aa36.7■■■■□ 3.47
CBX4-203ENST00000494546 HIDE1A8MVS5 230 aa36.7■■■■□ 3.47
CBX4-203ENST00000494546 DDHD2O94830 711 aa36.7■■■■□ 3.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms