RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 KSR1Q8IVT5 923 aa16.38■□□□□ 0.21
ACTB-213ENST00000493945 GUF1Q8N442 669 aaKnown RBP16.38■□□□□ 0.21
ACTB-213ENST00000493945 IFT122Q9HBG6 1241 aa16.38■□□□□ 0.21
ACTB-213ENST00000493945 CHST12Q9NRB3 414 aa16.38■□□□□ 0.21
ACTB-213ENST00000493945 TBX20Q9UMR3 447 aa16.38■□□□□ 0.21
ACTB-213ENST00000493945 CNTNAP2Q9UHC6 1331 aa16.38■□□□□ 0.21
ACTB-213ENST00000493945 BIN1O00499 593 aa16.37■□□□□ 0.21
ACTB-213ENST00000493945 KIAA0391O15091 583 aaKnown RBP16.37■□□□□ 0.21
ACTB-213ENST00000493945 CALUO43852 315 aaPredicted RBP16.37■□□□□ 0.21
ACTB-213ENST00000493945 CHRNA1P02708 482 aa16.37■□□□□ 0.21
ACTB-213ENST00000493945 IQCF3P0C7M6 154 aa16.37■□□□□ 0.21
ACTB-213ENST00000493945 GHRP10912 638 aa16.37■□□□□ 0.21
ACTB-213ENST00000493945 SKIP12755 728 aa16.37■□□□□ 0.21
ACTB-213ENST00000493945 NMT1P30419 496 aaKnown RBP16.37■□□□□ 0.21
ACTB-213ENST00000493945 MATR3P43243 847 aaKnown RBP eCLIP16.37■□□□□ 0.21
ACTB-213ENST00000493945 NLRP12P59046 1061 aa16.37■□□□□ 0.21
ACTB-213ENST00000493945 MBTD1Q05BQ5 628 aa16.37■□□□□ 0.21
ACTB-213ENST00000493945 MORC3Q14149 939 aa16.37■□□□□ 0.21
ACTB-213ENST00000493945 BMT2Q1RMZ1 405 aa16.37■□□□□ 0.21
ACTB-213ENST00000493945 MFSD5Q6N075 450 aa16.37■□□□□ 0.21
ACTB-213ENST00000493945 KIFC3Q9BVG8 833 aa16.37■□□□□ 0.21
ACTB-213ENST00000493945 IFIH1Q9BYX4 1025 aaKnown RBP16.37■□□□□ 0.21
ACTB-213ENST00000493945 TRIM6Q9C030 488 aaPredicted RBP16.37■□□□□ 0.21
ACTB-213ENST00000493945 GBP3Q9H0R5 595 aa16.37■□□□□ 0.21
ACTB-213ENST00000493945 MTIF3Q9H2K0 278 aaKnown RBP16.37■□□□□ 0.21
ACTB-213ENST00000493945 RPL13P26373 211 aaKnown RBP16.36■□□□□ 0.21
ACTB-213ENST00000493945 RAB27AP51159 221 aa16.36■□□□□ 0.21
ACTB-213ENST00000493945 NFX1Q12986 1120 aaKnown RBP16.36■□□□□ 0.21
ACTB-213ENST00000493945 KYAT1Q16773 422 aa16.36■□□□□ 0.21
ACTB-213ENST00000493945 KNOP1Q1ED39 458 aaKnown RBP16.36■□□□□ 0.21
ACTB-213ENST00000493945 DCAF4L1Q3SXM0 396 aa16.36■□□□□ 0.21
ACTB-213ENST00000493945 WNT8BQ93098 351 aa16.36■□□□□ 0.21
ACTB-213ENST00000493945 DHTKD1Q96HY7 919 aaPredicted RBP16.36■□□□□ 0.21
ACTB-213ENST00000493945 FZD8Q9H461 694 aa16.36■□□□□ 0.21
ACTB-213ENST00000493945 POLD4Q9HCU8 107 aa16.36■□□□□ 0.21
ACTB-213ENST00000493945 AGPAT5Q9NUQ2 364 aa16.36■□□□□ 0.21
ACTB-213ENST00000493945 PIN4Q9Y237 131 aaKnown RBP16.36■□□□□ 0.21
ACTB-213ENST00000493945 BRCA2P51587 3418 aa16.36■□□□□ 0.21
ACTB-213ENST00000493945 TOM1L1O75674 476 aa16.35■□□□□ 0.21
ACTB-213ENST00000493945 PPP1R37O75864 691 aa16.35■□□□□ 0.21
ACTB-213ENST00000493945 FGFR1OPO95684 399 aaKnown RBP16.35■□□□□ 0.21
ACTB-213ENST00000493945 PIGRP01833 764 aa16.35■□□□□ 0.21
ACTB-213ENST00000493945 MYBP10242 640 aa16.35■□□□□ 0.21
ACTB-213ENST00000493945 CYP2C18P33260 490 aa16.35■□□□□ 0.21
ACTB-213ENST00000493945 CCL23P55773 120 aa16.35■□□□□ 0.21
ACTB-213ENST00000493945 FPGSQ05932 587 aa16.35■□□□□ 0.21
ACTB-213ENST00000493945 STK4Q13043 487 aa16.35■□□□□ 0.21
ACTB-213ENST00000493945 ZSCAN23Q3MJ62 389 aa16.35■□□□□ 0.21
ACTB-213ENST00000493945 ATF7IP2Q5U623 682 aa16.35■□□□□ 0.21
ACTB-213ENST00000493945 KIAA0895Q8NCT3 520 aa16.35■□□□□ 0.21
ACTB-213ENST00000493945 ZNF507Q8TCN5 953 aa16.35■□□□□ 0.21
ACTB-213ENST00000493945 ERCC4Q92889 916 aaPredicted RBP16.35■□□□□ 0.21
ACTB-213ENST00000493945 ZNF668Q96K58 619 aaPredicted RBP16.35■□□□□ 0.21
ACTB-213ENST00000493945 FIZ1Q96SL8 496 aa16.35■□□□□ 0.21
ACTB-213ENST00000493945 TCHPQ9BT92 498 aa16.35■□□□□ 0.21
ACTB-213ENST00000493945 CCDC113Q9H0I3 377 aa16.35■□□□□ 0.21
ACTB-213ENST00000493945 C1orf112Q9NSG2 853 aa16.35■□□□□ 0.21
ACTB-213ENST00000493945 TYW1Q9NV66 732 aaKnown RBP16.35■□□□□ 0.21
ACTB-213ENST00000493945 ADGRA3Q8IWK6 1321 aa16.35■□□□□ 0.21
ACTB-213ENST00000493945 SYCE3A1L190 88 aa16.34■□□□□ 0.21
ACTB-213ENST00000493945 PRPF6O94906 941 aaKnown RBP16.34■□□□□ 0.21
ACTB-213ENST00000493945 LRRC63Q05C16 580 aa16.34■□□□□ 0.21
ACTB-213ENST00000493945 PAK1Q13153 545 aa16.34■□□□□ 0.21
ACTB-213ENST00000493945 LPIN1Q14693 890 aa16.34■□□□□ 0.21
ACTB-213ENST00000493945 TWF2Q6IBS0 349 aaKnown RBP16.34■□□□□ 0.21
ACTB-213ENST00000493945 CNKSR3Q6P9H4 555 aa16.34■□□□□ 0.21
ACTB-213ENST00000493945 PSRC1Q6PGN9 363 aaPredicted RBP16.34■□□□□ 0.21
ACTB-213ENST00000493945 EPM2AIP1Q7L775 607 aaPredicted RBP16.34■□□□□ 0.21
ACTB-213ENST00000493945 FAM228AQ86W67 206 aa16.34■□□□□ 0.21
ACTB-213ENST00000493945 PADI3Q9ULW8 664 aa16.34■□□□□ 0.21
ACTB-213ENST00000493945 ST3GAL5Q9UNP4 418 aa16.34■□□□□ 0.21
ACTB-213ENST00000493945 TNFSF13BQ9Y275 285 aa16.34■□□□□ 0.21
ACTB-213ENST00000493945 GDAQ9Y2T3 454 aa16.34■□□□□ 0.21
ACTB-213ENST00000493945 NOC2LQ9Y3T9 749 aaKnown RBP16.34■□□□□ 0.21
ACTB-213ENST00000493945 PDXKO00764 312 aa16.33■□□□□ 0.2
ACTB-213ENST00000493945 CLDN3O15551 220 aa16.33■□□□□ 0.2
ACTB-213ENST00000493945 TSPAN1O60635 241 aa16.33■□□□□ 0.2
ACTB-213ENST00000493945 LDHAP00338 332 aaKnown RBP16.33■□□□□ 0.2
ACTB-213ENST00000493945 CXCL10P02778 98 aa16.33■□□□□ 0.2
ACTB-213ENST00000493945 CD52P31358 61 aa16.33■□□□□ 0.2
ACTB-213ENST00000493945 TPM4P67936 248 aa16.33■□□□□ 0.2
ACTB-213ENST00000493945 TYRO3Q06418 890 aa16.33■□□□□ 0.2
ACTB-213ENST00000493945 IKBKEQ14164 716 aa16.33■□□□□ 0.2
ACTB-213ENST00000493945 NOLC1Q14978 699 aaKnown RBP eCLIP16.33■□□□□ 0.2
ACTB-213ENST00000493945 TPD52L1Q16890 204 aaPredicted RBP16.33■□□□□ 0.2
ACTB-213ENST00000493945 ZNF568Q3ZCX4 644 aa16.33■□□□□ 0.2
ACTB-213ENST00000493945 ZC2HC1CQ53FD0 456 aaPredicted RBP16.33■□□□□ 0.2
ACTB-213ENST00000493945 ARMCX5Q6P1M9 558 aa16.33■□□□□ 0.2
ACTB-213ENST00000493945 SLC27A1Q6PCB7 646 aa16.33■□□□□ 0.2
ACTB-213ENST00000493945 FOXR2Q6PJQ5 311 aa16.33■□□□□ 0.2
ACTB-213ENST00000493945 MPZL3Q6UWV2 235 aa16.33■□□□□ 0.2
ACTB-213ENST00000493945 USP37Q86T82 979 aa16.33■□□□□ 0.2
ACTB-213ENST00000493945 NELFCDQ8IXH7 590 aa16.33■□□□□ 0.2
ACTB-213ENST00000493945 SCFD1Q8WVM8 642 aa16.33■□□□□ 0.2
ACTB-213ENST00000493945 RSPH1Q8WYR4 309 aa16.33■□□□□ 0.2
ACTB-213ENST00000493945 STRA6Q9BX79 667 aa16.33■□□□□ 0.2
ACTB-213ENST00000493945 WNT8AQ9H1J5 351 aa16.33■□□□□ 0.2
ACTB-213ENST00000493945 ERVK-5Q9HDB9 667 aa16.33■□□□□ 0.2
ACTB-213ENST00000493945 ANKFY1Q9P2R3 1169 aa16.33■□□□□ 0.2
ACTB-213ENST00000493945 TRIM43BA6NCK2 446 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms