RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 COASYQ13057 564 aa14.8□□□□□ -0.04
MSH6-208ENST00000493177 ZSCAN23Q3MJ62 389 aa14.8□□□□□ -0.04
MSH6-208ENST00000493177 SASS6Q6UVJ0 657 aa14.8□□□□□ -0.04
MSH6-208ENST00000493177 GDPD5Q8WTR4 605 aa14.8□□□□□ -0.04
MSH6-208ENST00000493177 IFT74Q96LB3 600 aa14.8□□□□□ -0.04
MSH6-208ENST00000493177 GSDMAQ96QA5 445 aa14.8□□□□□ -0.04
MSH6-208ENST00000493177 OSMRQ99650 979 aa14.8□□□□□ -0.04
MSH6-208ENST00000493177 TBC1D7Q9P0N9 293 aa14.8□□□□□ -0.04
MSH6-208ENST00000493177 SUCLA2Q9P2R7 463 aaPredicted RBP14.8□□□□□ -0.04
MSH6-208ENST00000493177 MAN1B1Q9UKM7 699 aa14.8□□□□□ -0.04
MSH6-208ENST00000493177 LRFN2Q9ULH4 789 aa14.8□□□□□ -0.04
MSH6-208ENST00000493177 PADI3Q9ULW8 664 aa14.8□□□□□ -0.04
MSH6-208ENST00000493177 IGKV6-21A0A0C4DH24 114 aa14.79□□□□□ -0.04
MSH6-208ENST00000493177 SYCE3A1L190 88 aa14.79□□□□□ -0.04
MSH6-208ENST00000493177 DENND3A2RUS2 1198 aa14.79□□□□□ -0.04
MSH6-208ENST00000493177 KLRC4O43908 158 aa14.79□□□□□ -0.04
MSH6-208ENST00000493177 STAG3L1P0CL83 205 aa14.79□□□□□ -0.04
MSH6-208ENST00000493177 MAPK7Q13164 816 aa14.79□□□□□ -0.04
MSH6-208ENST00000493177 DRP2Q13474 957 aa14.79□□□□□ -0.04
MSH6-208ENST00000493177 KIZQ2M2Z5 673 aa14.79□□□□□ -0.04
MSH6-208ENST00000493177 SFR1Q86XK3 245 aa14.79□□□□□ -0.04
MSH6-208ENST00000493177 KIAA0319LQ8IZA0 1049 aa14.79□□□□□ -0.04
MSH6-208ENST00000493177 FBXO22Q8NEZ5 403 aa14.79□□□□□ -0.04
MSH6-208ENST00000493177 PSPC1Q8WXF1 523 aaKnown RBP14.79□□□□□ -0.04
MSH6-208ENST00000493177 AGO3Q9H9G7 860 aaKnown RBP14.79□□□□□ -0.04
MSH6-208ENST00000493177 LARSQ9P2J5 1176 aaKnown RBP14.79□□□□□ -0.04
MSH6-208ENST00000493177 FRMD3A2A2Y4 597 aa14.78□□□□□ -0.04
MSH6-208ENST00000493177 EPOPA6NHQ4 379 aa14.78□□□□□ -0.04
MSH6-208ENST00000493177 CCDC169A6NNP5 214 aa14.78□□□□□ -0.04
MSH6-208ENST00000493177 ENPP3O14638 875 aa14.78□□□□□ -0.04
MSH6-208ENST00000493177 GPR182O15218 404 aa14.78□□□□□ -0.04
MSH6-208ENST00000493177 PLS3P13797 630 aa14.78□□□□□ -0.04
MSH6-208ENST00000493177 ARL2P36404 184 aa14.78□□□□□ -0.04
MSH6-208ENST00000493177 SARSP49591 514 aaKnown RBP14.78□□□□□ -0.04
MSH6-208ENST00000493177 PEX3P56589 373 aa14.78□□□□□ -0.04
MSH6-208ENST00000493177 HTRA4P83105 476 aaPredicted RBP14.78□□□□□ -0.04
MSH6-208ENST00000493177 DMP1Q13316 513 aaPredicted RBP14.78□□□□□ -0.04
MSH6-208ENST00000493177 MKRN4PQ13434 485 aaPredicted RBP14.78□□□□□ -0.04
MSH6-208ENST00000493177 KCNB1Q14721 858 aa14.78□□□□□ -0.04
MSH6-208ENST00000493177 FAM26FQ5R3K3 315 aa14.78□□□□□ -0.04
MSH6-208ENST00000493177 RBM43Q6ZSC3 357 aaKnown RBP14.78□□□□□ -0.04
MSH6-208ENST00000493177 SPRED2Q7Z698 418 aa14.78□□□□□ -0.04
MSH6-208ENST00000493177 RHPN2Q8IUC4 686 aa14.78□□□□□ -0.04
MSH6-208ENST00000493177 FAM178BQ8IXR5 827 aa14.78□□□□□ -0.04
MSH6-208ENST00000493177 DAW1Q8N136 415 aa14.78□□□□□ -0.04
MSH6-208ENST00000493177 FIBCD1Q8N539 461 aa14.78□□□□□ -0.04
MSH6-208ENST00000493177 ASAP3Q8TDY4 903 aa14.78□□□□□ -0.04
MSH6-208ENST00000493177 HPS3Q969F9 1004 aa14.78□□□□□ -0.04
MSH6-208ENST00000493177 SAMD11Q96NU1 681 aa14.78□□□□□ -0.04
MSH6-208ENST00000493177 C17orf80Q9BSJ5 609 aa14.78□□□□□ -0.04
MSH6-208ENST00000493177 MRPL44Q9H9J2 332 aaKnown RBP14.78□□□□□ -0.04
MSH6-208ENST00000493177 TTC3P53804 2025 aa14.77□□□□□ -0.04
MSH6-208ENST00000493177 ADGRA3Q8IWK6 1321 aa14.77□□□□□ -0.04
MSH6-208ENST00000493177 LRRIQ4A6NIV6 560 aa14.77□□□□□ -0.05
MSH6-208ENST00000493177 DLL1O00548 723 aa14.77□□□□□ -0.05
MSH6-208ENST00000493177 RHOBTB3O94955 611 aa14.77□□□□□ -0.05
MSH6-208ENST00000493177 GLRA2P23416 452 aa14.77□□□□□ -0.05
MSH6-208ENST00000493177 ZNF131P52739 623 aa14.77□□□□□ -0.05
MSH6-208ENST00000493177 CRYBB1P53674 252 aaPredicted RBP14.77□□□□□ -0.05
MSH6-208ENST00000493177 SMTNP53814 917 aa14.77□□□□□ -0.05
MSH6-208ENST00000493177 NLRP11P59045 1033 aaKnown RBP14.77□□□□□ -0.05
MSH6-208ENST00000493177 ERVK-21P61565 698 aa14.77□□□□□ -0.05
MSH6-208ENST00000493177 TFDP1Q14186 410 aa14.77□□□□□ -0.05
MSH6-208ENST00000493177 BTG3Q14201 252 aaPredicted RBP14.77□□□□□ -0.05
MSH6-208ENST00000493177 MXD4Q14582 209 aaPredicted RBP14.77□□□□□ -0.05
MSH6-208ENST00000493177 PPP2R5AQ15172 486 aa14.77□□□□□ -0.05
MSH6-208ENST00000493177 L1TD1Q5T7N2 865 aaKnown RBP14.77□□□□□ -0.05
MSH6-208ENST00000493177 NT5DC1Q5TFE4 455 aa14.77□□□□□ -0.05
MSH6-208ENST00000493177 TRIML1Q8N9V2 468 aa14.77□□□□□ -0.05
MSH6-208ENST00000493177 SPATA20Q8TB22 786 aa14.77□□□□□ -0.05
MSH6-208ENST00000493177 PRPF31Q8WWY3 499 aaKnown RBP14.77□□□□□ -0.05
MSH6-208ENST00000493177 NLRP7Q8WX94 980 aa14.77□□□□□ -0.05
MSH6-208ENST00000493177 ZNF668Q96K58 619 aaPredicted RBP14.77□□□□□ -0.05
MSH6-208ENST00000493177 NLRP4Q96MN2 994 aa14.77□□□□□ -0.05
MSH6-208ENST00000493177 C17orf75Q9HAS0 396 aa14.77□□□□□ -0.05
MSH6-208ENST00000493177 SLC39A2Q9NP94 309 aa14.77□□□□□ -0.05
MSH6-208ENST00000493177 KMT5AQ9NQR1 393 aa14.77□□□□□ -0.05
MSH6-208ENST00000493177 RNF216Q9NWF9 866 aaPredicted RBP14.77□□□□□ -0.05
MSH6-208ENST00000493177 THEGQ9P2T0 379 aa14.77□□□□□ -0.05
MSH6-208ENST00000493177 SEL1LQ9UBV2 794 aa14.77□□□□□ -0.05
MSH6-208ENST00000493177 NOC2LQ9Y3T9 749 aaKnown RBP14.77□□□□□ -0.05
MSH6-208ENST00000493177 KIAA1671Q9BY89 1806 aa14.77□□□□□ -0.05
MSH6-208ENST00000493177 K7ENM7 598 aa14.76□□□□□ -0.05
MSH6-208ENST00000493177 ASAP2O43150 1006 aa14.76□□□□□ -0.05
MSH6-208ENST00000493177 GCNT3O95395 438 aa14.76□□□□□ -0.05
MSH6-208ENST00000493177 SRGAP2CP0DJJ0 459 aa14.76□□□□□ -0.05
MSH6-208ENST00000493177 CTNNB1P35222 781 aa14.76□□□□□ -0.05
MSH6-208ENST00000493177 NLRP12P59046 1061 aa14.76□□□□□ -0.05
MSH6-208ENST00000493177 LAMTOR4Q0VGL1 99 aa14.76□□□□□ -0.05
MSH6-208ENST00000493177 PSMD2Q13200 908 aa14.76□□□□□ -0.05
MSH6-208ENST00000493177 MORC3Q14149 939 aa14.76□□□□□ -0.05
MSH6-208ENST00000493177 NPAS4Q8IUM7 802 aa14.76□□□□□ -0.05
MSH6-208ENST00000493177 KSR1Q8IVT5 923 aa14.76□□□□□ -0.05
MSH6-208ENST00000493177 LINC01465Q8N7H1 131 aa14.76□□□□□ -0.05
MSH6-208ENST00000493177 DEPTORQ8TB45 409 aa14.76□□□□□ -0.05
MSH6-208ENST00000493177 BSNDQ8WZ55 320 aa14.76□□□□□ -0.05
MSH6-208ENST00000493177 ANP32EQ9BTT0 268 aa14.76□□□□□ -0.05
MSH6-208ENST00000493177 CDHR5Q9HBB8 845 aa14.76□□□□□ -0.05
MSH6-208ENST00000493177 KCNG1Q9UIX4 513 aa14.76□□□□□ -0.05
MSH6-208ENST00000493177 ST3GAL5Q9UNP4 418 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms