RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 MPP4Q96JB8 637 aa5.57□□□□□ -1.52
RTN4-215ENST00000491592 GBP4Q96PP9 640 aa5.57□□□□□ -1.52
RTN4-215ENST00000491592 WRNIP1Q96S55 665 aa5.57□□□□□ -1.52
RTN4-215ENST00000491592 ZMAT4Q9H898 229 aa5.57□□□□□ -1.52
RTN4-215ENST00000491592 EPB41L4AQ9HCS5 686 aaPredicted RBP5.57□□□□□ -1.52
RTN4-215ENST00000491592 ZIM2Q9NZV7 527 aa5.57□□□□□ -1.52
RTN4-215ENST00000491592 LUZP4Q9P127 313 aa5.57□□□□□ -1.52
RTN4-215ENST00000491592 ODF2LQ9ULJ1 636 aa5.57□□□□□ -1.52
RTN4-215ENST00000491592 CNOT6Q9ULM6 557 aaKnown RBP5.57□□□□□ -1.52
RTN4-215ENST00000491592 KCTD3Q9Y597 815 aa5.57□□□□□ -1.52
RTN4-215ENST00000491592 SAMD9Q5K651 1589 aa5.57□□□□□ -1.52
RTN4-215ENST00000491592 ABCA10Q8WWZ4 1543 aa5.57□□□□□ -1.52
RTN4-215ENST00000491592 PLEKHH2Q8IVE3 1493 aa5.57□□□□□ -1.52
RTN4-215ENST00000491592 MYBBP1AQ9BQG0 1328 aaKnown RBP5.56□□□□□ -1.52
RTN4-215ENST00000491592 FAM170AA1A519 330 aa5.56□□□□□ -1.52
RTN4-215ENST00000491592 PABPN1LA6NDY0 278 aaKnown RBP5.56□□□□□ -1.52
RTN4-215ENST00000491592 GPR39O43194 453 aa5.56□□□□□ -1.52
RTN4-215ENST00000491592 MPIG6BO95866 241 aa5.56□□□□□ -1.52
RTN4-215ENST00000491592 ENO2P09104 434 aaPredicted RBP5.56□□□□□ -1.52
RTN4-215ENST00000491592 RAB27AP51159 221 aa5.56□□□□□ -1.52
RTN4-215ENST00000491592 PSMC1P62191 440 aaKnown RBP5.56□□□□□ -1.52
RTN4-215ENST00000491592 PHC1P78364 1004 aa5.56□□□□□ -1.52
RTN4-215ENST00000491592 PFKPQ01813 784 aa5.56□□□□□ -1.52
RTN4-215ENST00000491592 NEXNQ0ZGT2 675 aa5.56□□□□□ -1.52
RTN4-215ENST00000491592 SMAD4Q13485 552 aaKnown RBP5.56□□□□□ -1.52
RTN4-215ENST00000491592 EPHA7Q15375 998 aa5.56□□□□□ -1.52
RTN4-215ENST00000491592 TAF11Q15544 211 aa5.56□□□□□ -1.52
RTN4-215ENST00000491592 DDB1Q16531 1140 aa5.56□□□□□ -1.52
RTN4-215ENST00000491592 NBPF8Q3BBV2 869 aa5.56□□□□□ -1.52
RTN4-215ENST00000491592 PDXDC1Q6P996 788 aa5.56□□□□□ -1.52
RTN4-215ENST00000491592 CNKSR3Q6P9H4 555 aa5.56□□□□□ -1.52
RTN4-215ENST00000491592 MMS22LQ6ZRQ5 1243 aa5.56□□□□□ -1.52
RTN4-215ENST00000491592 RTN4RL1Q86UN2 441 aaPredicted RBP5.56□□□□□ -1.52
RTN4-215ENST00000491592 HSCBQ8IWL3 235 aa5.56□□□□□ -1.52
RTN4-215ENST00000491592 IFNL2Q8IZJ0 200 aa5.56□□□□□ -1.52
RTN4-215ENST00000491592 KYQ8NBH2 561 aa5.56□□□□□ -1.52
RTN4-215ENST00000491592 WDR66Q8TBY9 1149 aa5.56□□□□□ -1.52
RTN4-215ENST00000491592 IGDCC4Q8TDY8 1250 aa5.56□□□□□ -1.52
RTN4-215ENST00000491592 FNIP1Q8TF40 1166 aa5.56□□□□□ -1.52
RTN4-215ENST00000491592 FRAT1Q92837 279 aaPredicted RBP5.56□□□□□ -1.52
RTN4-215ENST00000491592 ERCC4Q92889 916 aaPredicted RBP5.56□□□□□ -1.52
RTN4-215ENST00000491592 CLIC6Q96NY7 704 aa5.56□□□□□ -1.52
RTN4-215ENST00000491592 INCENPQ9NQS7 918 aa5.56□□□□□ -1.52
RTN4-215ENST00000491592 ZFP69BQ9UJL9 534 aa5.56□□□□□ -1.52
RTN4-215ENST00000491592 SMG5Q9UPR3 1016 aaKnown RBP5.56□□□□□ -1.52
RTN4-215ENST00000491592 DAAM1Q9Y4D1 1078 aa5.56□□□□□ -1.52
RTN4-215ENST00000491592 GOLGA6L6A8MZA4 724 aa5.55□□□□□ -1.52
RTN4-215ENST00000491592 ULK1O75385 1050 aa5.55□□□□□ -1.52
RTN4-215ENST00000491592 HNRNPCP07910 306 aaKnown RBP eCLIP5.55□□□□□ -1.52
RTN4-215ENST00000491592 CD40P25942 277 aa5.55□□□□□ -1.52
RTN4-215ENST00000491592 HTR3AP46098 478 aa5.55□□□□□ -1.52
RTN4-215ENST00000491592 NEK2P51955 445 aa5.55□□□□□ -1.52
RTN4-215ENST00000491592 SMAD3P84022 425 aaKnown RBP5.55□□□□□ -1.52
RTN4-215ENST00000491592 RTP5Q14D33 572 aa5.55□□□□□ -1.52
RTN4-215ENST00000491592 TERF2Q15554 542 aa5.55□□□□□ -1.52
RTN4-215ENST00000491592 SMAD2Q15796 467 aaKnown RBP5.55□□□□□ -1.52
RTN4-215ENST00000491592 PHF19Q5T6S3 580 aa5.55□□□□□ -1.52
RTN4-215ENST00000491592 GPR158Q5T848 1215 aa5.55□□□□□ -1.52
RTN4-215ENST00000491592 NXNQ6DKJ4 435 aa5.55□□□□□ -1.52
RTN4-215ENST00000491592 CENPQQ7L2Z9 268 aaPredicted RBP5.55□□□□□ -1.52
RTN4-215ENST00000491592 DGKHQ86XP1 1220 aa5.55□□□□□ -1.52
RTN4-215ENST00000491592 LMNTD2Q8IXW0 634 aa5.55□□□□□ -1.52
RTN4-215ENST00000491592 ZZZ3Q8IYH5 903 aa5.55□□□□□ -1.52
RTN4-215ENST00000491592 TCEAL8Q8IYN2 117 aa5.55□□□□□ -1.52
RTN4-215ENST00000491592 TTLL6Q8N841 843 aa5.55□□□□□ -1.52
RTN4-215ENST00000491592 FOXRED1Q96CU9 486 aaPredicted RBP5.55□□□□□ -1.52
RTN4-215ENST00000491592 C16orf92Q96LL3 132 aa5.55□□□□□ -1.52
RTN4-215ENST00000491592 PWWP2AQ96N64 755 aa5.55□□□□□ -1.52
RTN4-215ENST00000491592 MS4A5Q9H3V2 200 aa5.55□□□□□ -1.52
RTN4-215ENST00000491592 RRP7BPQ9NSQ0 103 aa5.55□□□□□ -1.52
RTN4-215ENST00000491592 UCKL1Q9NWZ5 548 aa5.55□□□□□ -1.52
RTN4-215ENST00000491592 ARHGAP20Q9P2F6 1191 aa5.55□□□□□ -1.52
RTN4-215ENST00000491592 USP25Q9UHP3 1055 aa5.55□□□□□ -1.52
RTN4-215ENST00000491592 MBD5Q9P267 1494 aa5.54□□□□□ -1.52
RTN4-215ENST00000491592 UBA6A0AVT1 1052 aaPredicted RBP5.54□□□□□ -1.52
RTN4-215ENST00000491592 PRAMEF22A3QJZ6 481 aa5.54□□□□□ -1.52
RTN4-215ENST00000491592 AKAP10O43572 662 aa5.54□□□□□ -1.52
RTN4-215ENST00000491592 MTA2O94776 668 aa5.54□□□□□ -1.52
RTN4-215ENST00000491592 PRLP01236 227 aa5.54□□□□□ -1.52
RTN4-215ENST00000491592 INHBBP09529 407 aa5.54□□□□□ -1.52
RTN4-215ENST00000491592 GLRBP48167 497 aa5.54□□□□□ -1.52
RTN4-215ENST00000491592 SARSP49591 514 aaKnown RBP5.54□□□□□ -1.52
RTN4-215ENST00000491592 GUCY2FP51841 1108 aa5.54□□□□□ -1.52
RTN4-215ENST00000491592 CTSWP56202 376 aa5.54□□□□□ -1.52
RTN4-215ENST00000491592 ALDH6A1Q02252 535 aaKnown RBP5.54□□□□□ -1.52
RTN4-215ENST00000491592 MLC1Q15049 377 aa5.54□□□□□ -1.52
RTN4-215ENST00000491592 VWA3BQ502W6 1294 aa5.54□□□□□ -1.52
RTN4-215ENST00000491592 ZNF385BQ569K4 471 aa5.54□□□□□ -1.52
RTN4-215ENST00000491592 PRAMEF18Q5VWM3 479 aa5.54□□□□□ -1.52
RTN4-215ENST00000491592 RNF219Q5W0B1 726 aaPredicted RBP5.54□□□□□ -1.52
RTN4-215ENST00000491592 PPP4R3AQ6IN85 833 aa5.54□□□□□ -1.52
RTN4-215ENST00000491592 NECAB2Q7Z6G3 386 aa5.54□□□□□ -1.52
RTN4-215ENST00000491592 LCA5Q86VQ0 697 aa5.54□□□□□ -1.52
RTN4-215ENST00000491592 NME9Q86XW9 330 aa5.54□□□□□ -1.52
RTN4-215ENST00000491592 NDUFAF2Q8N183 169 aa5.54□□□□□ -1.52
RTN4-215ENST00000491592 C7orf31Q8N865 590 aa5.54□□□□□ -1.52
RTN4-215ENST00000491592 CLRN3Q8NCR9 226 aa5.54□□□□□ -1.52
RTN4-215ENST00000491592 COG1Q8WTW3 980 aa5.54□□□□□ -1.52
RTN4-215ENST00000491592 RTF1Q92541 710 aaKnown RBP5.54□□□□□ -1.52
RTN4-215ENST00000491592 RPGRQ92834 1020 aaKnown RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms