RNA–Protein interactions for RNA: ENST00000491382.1

PFDN6-207, Transcript of prefoldin subunit 6, humanhuman

TSL 2

Gene PFDN6, Length 989 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-207ENST00000491382 SLC27A1Q6PCB7 646 aa17.7■□□□□ 0.42
PFDN6-207ENST00000491382 C1orf186Q6ZWK4 172 aa17.7■□□□□ 0.42
PFDN6-207ENST00000491382 MRPL10Q7Z7H8 261 aaKnown RBP17.7■□□□□ 0.42
PFDN6-207ENST00000491382 THNSL1Q8IYQ7 743 aa17.7■□□□□ 0.42
PFDN6-207ENST00000491382 KLHL23Q8NBE8 558 aa17.7■□□□□ 0.42
PFDN6-207ENST00000491382 COLGALT1Q8NBJ5 622 aa17.7■□□□□ 0.42
PFDN6-207ENST00000491382 URGCPQ8TCY9 931 aa17.7■□□□□ 0.42
PFDN6-207ENST00000491382 LPPQ93052 612 aa17.7■□□□□ 0.42
PFDN6-207ENST00000491382 USP28Q96RU2 1077 aa17.7■□□□□ 0.42
PFDN6-207ENST00000491382 RUSC1Q9BVN2 902 aa17.7■□□□□ 0.42
PFDN6-207ENST00000491382 CWH43Q9H720 699 aa17.7■□□□□ 0.42
PFDN6-207ENST00000491382 C17orf75Q9HAS0 396 aa17.7■□□□□ 0.42
PFDN6-207ENST00000491382 ALG13Q9NP73 1137 aaKnown RBP17.7■□□□□ 0.42
PFDN6-207ENST00000491382 UBN1Q9NPG3 1134 aa17.7■□□□□ 0.42
PFDN6-207ENST00000491382 SRPRBQ9Y5M8 271 aaKnown RBP17.7■□□□□ 0.42
PFDN6-207ENST00000491382 MORC2Q9Y6X9 1032 aaPredicted RBP17.7■□□□□ 0.42
PFDN6-207ENST00000491382 ATG2AQ2TAZ0 1938 aa17.7■□□□□ 0.42
PFDN6-207ENST00000491382 PHLPP2Q6ZVD8 1323 aa17.7■□□□□ 0.42
PFDN6-207ENST00000491382 B4GALT5O43286 388 aa17.69■□□□□ 0.42
PFDN6-207ENST00000491382 HIP1RO75146 1068 aa17.69■□□□□ 0.42
PFDN6-207ENST00000491382 ITGB1P05556 798 aa17.69■□□□□ 0.42
PFDN6-207ENST00000491382 PRKCBP05771 671 aa17.69■□□□□ 0.42
PFDN6-207ENST00000491382 PLA2G4BP0C869 781 aa17.69■□□□□ 0.42
PFDN6-207ENST00000491382 ITGA4P13612 1032 aa17.69■□□□□ 0.42
PFDN6-207ENST00000491382 NCLP19338 710 aaKnown RBP17.69■□□□□ 0.42
PFDN6-207ENST00000491382 TXLNAP40222 546 aa17.69■□□□□ 0.42
PFDN6-207ENST00000491382 UBE3AQ05086 875 aa17.69■□□□□ 0.42
PFDN6-207ENST00000491382 GRIN1Q05586 938 aa17.69■□□□□ 0.42
PFDN6-207ENST00000491382 PRPF4BQ13523 1007 aaKnown RBP17.69■□□□□ 0.42
PFDN6-207ENST00000491382 LONRF3Q496Y0 759 aa17.69■□□□□ 0.42
PFDN6-207ENST00000491382 NOMO2Q5JPE7 1267 aa17.69■□□□□ 0.42
PFDN6-207ENST00000491382 SPRYD3Q8NCJ5 442 aa17.69■□□□□ 0.42
PFDN6-207ENST00000491382 ATXN2LQ8WWM7 1075 aaKnown RBP17.69■□□□□ 0.42
PFDN6-207ENST00000491382 ZNF558Q96NG5 402 aa17.69■□□□□ 0.42
PFDN6-207ENST00000491382 CCSER1Q9C0I3 900 aa17.69■□□□□ 0.42
PFDN6-207ENST00000491382 FZD8Q9H461 694 aa17.69■□□□□ 0.42
PFDN6-207ENST00000491382 NSUN3Q9H649 340 aaKnown RBP17.69■□□□□ 0.42
PFDN6-207ENST00000491382 RSAD1Q9HA92 442 aa17.69■□□□□ 0.42
PFDN6-207ENST00000491382 DAXXQ9UER7 740 aaPredicted RBP17.69■□□□□ 0.42
PFDN6-207ENST00000491382 KCNG1Q9UIX4 513 aa17.69■□□□□ 0.42
PFDN6-207ENST00000491382 FBXO2Q9UK22 296 aaPredicted RBP17.69■□□□□ 0.42
PFDN6-207ENST00000491382 COG5Q9UP83 839 aa17.69■□□□□ 0.42
PFDN6-207ENST00000491382 INPP5FQ9Y2H2 1132 aa17.69■□□□□ 0.42
PFDN6-207ENST00000491382 IPPQ9Y573 584 aa17.69■□□□□ 0.42
PFDN6-207ENST00000491382 A0A1B0GUA9 196 aa17.68■□□□□ 0.42
PFDN6-207ENST00000491382 CCDC169A6NNP5 214 aa17.68■□□□□ 0.42
PFDN6-207ENST00000491382 N4BP3O15049 544 aa17.68■□□□□ 0.42
PFDN6-207ENST00000491382 FGF18O76093 207 aa17.68■□□□□ 0.42
PFDN6-207ENST00000491382 ZSCAN22P10073 491 aaPredicted RBP17.68■□□□□ 0.42
PFDN6-207ENST00000491382 LIG1P18858 919 aa17.68■□□□□ 0.42
PFDN6-207ENST00000491382 SLC12A3P55017 1021 aa17.68■□□□□ 0.42
PFDN6-207ENST00000491382 PEX3P56589 373 aa17.68■□□□□ 0.42
PFDN6-207ENST00000491382 RNASELQ05823 741 aaKnown RBP17.68■□□□□ 0.42
PFDN6-207ENST00000491382 SLC39A14Q15043 492 aa17.68■□□□□ 0.42
PFDN6-207ENST00000491382 KARSQ15046 597 aaKnown RBP17.68■□□□□ 0.42
PFDN6-207ENST00000491382 STK38Q15208 465 aa17.68■□□□□ 0.42
PFDN6-207ENST00000491382 KCNT2Q6UVM3 1135 aa17.68■□□□□ 0.42
PFDN6-207ENST00000491382 LRRC55Q6ZSA7 311 aa17.68■□□□□ 0.42
PFDN6-207ENST00000491382 SPPL3Q8TCT6 385 aa17.68■□□□□ 0.42
PFDN6-207ENST00000491382 PPP2R3CQ969Q6 453 aa17.68■□□□□ 0.42
PFDN6-207ENST00000491382 EIF2AQ9BY44 585 aaKnown RBP17.68■□□□□ 0.42
PFDN6-207ENST00000491382 CCDC113Q9H0I3 377 aa17.68■□□□□ 0.42
PFDN6-207ENST00000491382 POLD4Q9HCU8 107 aa17.68■□□□□ 0.42
PFDN6-207ENST00000491382 PRDM6Q9NQX0 595 aa17.68■□□□□ 0.42
PFDN6-207ENST00000491382 KANSL3Q9P2N6 904 aa17.68■□□□□ 0.42
PFDN6-207ENST00000491382 HCSTQ9UBK5 93 aa17.68■□□□□ 0.42
PFDN6-207ENST00000491382 CCDC39Q9UFE4 941 aa17.68■□□□□ 0.42
PFDN6-207ENST00000491382 MEIS3P2A8K0S8 358 aa17.67■□□□□ 0.42
PFDN6-207ENST00000491382 K7ERI5 159 aa17.67■□□□□ 0.42
PFDN6-207ENST00000491382 ACKR2O00590 384 aa17.67■□□□□ 0.42
PFDN6-207ENST00000491382 OFD1O75665 1012 aa17.67■□□□□ 0.42
PFDN6-207ENST00000491382 PLCG1P19174 1290 aa17.67■□□□□ 0.42
PFDN6-207ENST00000491382 NPTX2P47972 431 aa17.67■□□□□ 0.42
PFDN6-207ENST00000491382 NASPP49321 788 aaPredicted RBP17.67■□□□□ 0.42
PFDN6-207ENST00000491382 ALDH7A1P49419 539 aaKnown RBP17.67■□□□□ 0.42
PFDN6-207ENST00000491382 AAK1Q2M2I8 961 aa17.67■□□□□ 0.42
PFDN6-207ENST00000491382 AGMOQ6ZNB7 445 aa17.67■□□□□ 0.42
PFDN6-207ENST00000491382 DAW1Q8N136 415 aa17.67■□□□□ 0.42
PFDN6-207ENST00000491382 KRI1Q8N9T8 703 aaKnown RBP17.67■□□□□ 0.42
PFDN6-207ENST00000491382 SMG8Q8ND04 991 aaKnown RBP17.67■□□□□ 0.42
PFDN6-207ENST00000491382 POF1BQ8WVV4 589 aa17.67■□□□□ 0.42
PFDN6-207ENST00000491382 HLA-CQ95604 372 aa17.67■□□□□ 0.42
PFDN6-207ENST00000491382 ADPGKQ9BRR6 497 aa17.67■□□□□ 0.42
PFDN6-207ENST00000491382 KIFC3Q9BVG8 833 aa17.67■□□□□ 0.42
PFDN6-207ENST00000491382 KMT5AQ9NQR1 393 aa17.67■□□□□ 0.42
PFDN6-207ENST00000491382 TBC1D13Q9NVG8 400 aa17.67■□□□□ 0.42
PFDN6-207ENST00000491382 PUF60Q9UHX1 559 aaKnown RBP17.67■□□□□ 0.42
PFDN6-207ENST00000491382 RBM19Q9Y4C8 960 aaKnown RBP17.67■□□□□ 0.42
PFDN6-207ENST00000491382 TDRD15B5MCY1 1934 aaKnown RBP17.66■□□□□ 0.42
PFDN6-207ENST00000491382 ZC3H11AO75152 810 aaKnown RBP eCLIP17.66■□□□□ 0.422e-7■■■□□ 16.9
PFDN6-207ENST00000491382 NPTXRO95502 500 aa17.66■□□□□ 0.42
PFDN6-207ENST00000491382 F13A1P00488 732 aa17.66■□□□□ 0.42
PFDN6-207ENST00000491382 SMTNP53814 917 aa17.66■□□□□ 0.42
PFDN6-207ENST00000491382 PLCB3Q01970 1234 aa17.66■□□□□ 0.42
PFDN6-207ENST00000491382 KRT17Q04695 432 aa17.66■□□□□ 0.42
PFDN6-207ENST00000491382 RAD51AP2Q09MP3 1159 aa17.66■□□□□ 0.42
PFDN6-207ENST00000491382 MAPK7Q13164 816 aa17.66■□□□□ 0.42
PFDN6-207ENST00000491382 FOXD4L5Q5VV16 416 aaPredicted RBP17.66■□□□□ 0.42
PFDN6-207ENST00000491382 APBB1IPQ7Z5R6 666 aaPredicted RBP17.66■□□□□ 0.42
PFDN6-207ENST00000491382 GPBP1Q86WP2 473 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms