RNA–Protein interactions for RNA: ENST00000491104.1

CACNA1C-227, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 5

Gene CACNA1C, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-227ENST00000491104 SPATA20Q8TB22 786 aa11.84□□□□□ -0.51
CACNA1C-227ENST00000491104 NTPCRQ9BSD7 190 aaKnown RBP11.84□□□□□ -0.51
CACNA1C-227ENST00000491104 STRA6Q9BX79 667 aa11.84□□□□□ -0.51
CACNA1C-227ENST00000491104 IFIH1Q9BYX4 1025 aaKnown RBP11.84□□□□□ -0.51
CACNA1C-227ENST00000491104 FZD8Q9H461 694 aa11.84□□□□□ -0.51
CACNA1C-227ENST00000491104 TMEM134Q9H6X4 195 aa11.84□□□□□ -0.51
CACNA1C-227ENST00000491104 KIAA1468Q9P260 1216 aa11.84□□□□□ -0.51
CACNA1C-227ENST00000491104 MAPK8IP1Q9UQF2 711 aa11.84□□□□□ -0.51
CACNA1C-227ENST00000491104 PIN4Q9Y237 131 aaKnown RBP11.84□□□□□ -0.51
CACNA1C-227ENST00000491104 NR2E3Q9Y5X4 410 aa11.84□□□□□ -0.51
CACNA1C-227ENST00000491104 TISP43B9A030 160 aa11.83□□□□□ -0.52
CACNA1C-227ENST00000491104 H0YGN5 161 aa11.83□□□□□ -0.52
CACNA1C-227ENST00000491104 GPR182O15218 404 aa11.83□□□□□ -0.52
CACNA1C-227ENST00000491104 ARF4P18085 180 aaPredicted RBP11.83□□□□□ -0.52
CACNA1C-227ENST00000491104 BMP6P22004 513 aa11.83□□□□□ -0.52
CACNA1C-227ENST00000491104 RFC2P35250 354 aa11.83□□□□□ -0.52
CACNA1C-227ENST00000491104 MAGEA10P43363 369 aaPredicted RBP11.83□□□□□ -0.52
CACNA1C-227ENST00000491104 EFNA5P52803 228 aa11.83□□□□□ -0.52
CACNA1C-227ENST00000491104 STRN3Q13033 797 aa11.83□□□□□ -0.52
CACNA1C-227ENST00000491104 PPIGQ13427 754 aaKnown RBP eCLIP11.83□□□□□ -0.52
CACNA1C-227ENST00000491104 PRPF4BQ13523 1007 aaKnown RBP11.83□□□□□ -0.52
CACNA1C-227ENST00000491104 MORC3Q14149 939 aa11.83□□□□□ -0.52
CACNA1C-227ENST00000491104 L1TD1Q5T7N2 865 aaKnown RBP11.83□□□□□ -0.52
CACNA1C-227ENST00000491104 NT5DC1Q5TFE4 455 aa11.83□□□□□ -0.52
CACNA1C-227ENST00000491104 EEF1DP3Q658K8 133 aa11.83□□□□□ -0.52
CACNA1C-227ENST00000491104 C16orf59Q7L2K0 433 aa11.83□□□□□ -0.52
CACNA1C-227ENST00000491104 EPM2AIP1Q7L775 607 aaPredicted RBP11.83□□□□□ -0.52
CACNA1C-227ENST00000491104 SCFD1Q8WVM8 642 aa11.83□□□□□ -0.52
CACNA1C-227ENST00000491104 LINC01599Q8WXQ3 324 aa11.83□□□□□ -0.52
CACNA1C-227ENST00000491104 SEPT8Q92599 483 aa11.83□□□□□ -0.52
CACNA1C-227ENST00000491104 GSDMAQ96QA5 445 aa11.83□□□□□ -0.52
CACNA1C-227ENST00000491104 LBHD1Q9BQE6 289 aaPredicted RBP11.83□□□□□ -0.52
CACNA1C-227ENST00000491104 TARS2Q9BW92 718 aaKnown RBP11.83□□□□□ -0.52
CACNA1C-227ENST00000491104 ST6GALNAC4Q9H4F1 302 aa11.83□□□□□ -0.52
CACNA1C-227ENST00000491104 IL23AQ9NPF7 189 aa11.83□□□□□ -0.52
CACNA1C-227ENST00000491104 AGPAT5Q9NUQ2 364 aa11.83□□□□□ -0.52
CACNA1C-227ENST00000491104 PRMT7Q9NVM4 692 aaPredicted RBP11.83□□□□□ -0.52
CACNA1C-227ENST00000491104 RMND1Q9NWS8 449 aa11.83□□□□□ -0.52
CACNA1C-227ENST00000491104 TBX20Q9UMR3 447 aa11.83□□□□□ -0.52
CACNA1C-227ENST00000491104 SQORQ9Y6N5 450 aa11.83□□□□□ -0.52
CACNA1C-227ENST00000491104 CNTNAP2Q9UHC6 1331 aa11.83□□□□□ -0.52
CACNA1C-227ENST00000491104 ZMYM2Q9UBW7 1377 aa11.82□□□□□ -0.52
CACNA1C-227ENST00000491104 H0YCG3 227 aa11.82□□□□□ -0.52
CACNA1C-227ENST00000491104 ACKR2O00590 384 aa11.82□□□□□ -0.52
CACNA1C-227ENST00000491104 PARNO95453 639 aaKnown RBP11.82□□□□□ -0.52
CACNA1C-227ENST00000491104 HARSP12081 509 aaKnown RBP11.82□□□□□ -0.52
CACNA1C-227ENST00000491104 HOXA11P31270 313 aaPredicted RBP11.82□□□□□ -0.52
CACNA1C-227ENST00000491104 HOXD13P35453 343 aa11.82□□□□□ -0.52
CACNA1C-227ENST00000491104 PSMD2Q13200 908 aa11.82□□□□□ -0.52
CACNA1C-227ENST00000491104 FAM187BQ17R55 369 aa11.82□□□□□ -0.52
CACNA1C-227ENST00000491104 ZNF658Q5TYW1 1059 aaPredicted RBP11.82□□□□□ -0.52
CACNA1C-227ENST00000491104 SLC39A4Q6P5W5 647 aa11.82□□□□□ -0.52
CACNA1C-227ENST00000491104 CNKSR3Q6P9H4 555 aa11.82□□□□□ -0.52
CACNA1C-227ENST00000491104 RBM43Q6ZSC3 357 aaKnown RBP11.82□□□□□ -0.52
CACNA1C-227ENST00000491104 RTN4RL1Q86UN2 441 aaPredicted RBP11.82□□□□□ -0.52
CACNA1C-227ENST00000491104 MAP4K3Q8IVH8 894 aa11.82□□□□□ -0.52
CACNA1C-227ENST00000491104 USP38Q8NB14 1042 aa11.82□□□□□ -0.52
CACNA1C-227ENST00000491104 BICD1Q96G01 975 aa11.82□□□□□ -0.52
CACNA1C-227ENST00000491104 ZBTB45Q96K62 511 aaPredicted RBP11.82□□□□□ -0.52
CACNA1C-227ENST00000491104 MRPL4Q9BYD3 311 aaKnown RBP11.82□□□□□ -0.52
CACNA1C-227ENST00000491104 PDZD7Q9H5P4 517 aa11.82□□□□□ -0.52
CACNA1C-227ENST00000491104 KCNG1Q9UIX4 513 aa11.82□□□□□ -0.52
CACNA1C-227ENST00000491104 ANKRD63C9JTQ0 380 aa11.81□□□□□ -0.52
CACNA1C-227ENST00000491104 EIF3DO15371 548 aaKnown RBP eCLIP11.81□□□□□ -0.52
CACNA1C-227ENST00000491104 NPTXRO95502 500 aa11.81□□□□□ -0.52
CACNA1C-227ENST00000491104 CD44P16070 742 aaKnown RBP11.81□□□□□ -0.52
CACNA1C-227ENST00000491104 PRCPP42785 496 aa11.81□□□□□ -0.52
CACNA1C-227ENST00000491104 LIG4P49917 911 aa11.81□□□□□ -0.52
CACNA1C-227ENST00000491104 MLLT1Q03111 559 aaPredicted RBP11.81□□□□□ -0.52
CACNA1C-227ENST00000491104 DSC3Q14574 896 aa11.81□□□□□ -0.52
CACNA1C-227ENST00000491104 SKOR2Q2VWA4 1001 aaPredicted RBP11.81□□□□□ -0.52
CACNA1C-227ENST00000491104 UBXN11Q5T124 520 aa11.81□□□□□ -0.52
CACNA1C-227ENST00000491104 ATF7IP2Q5U623 682 aa11.81□□□□□ -0.52
CACNA1C-227ENST00000491104 TWF2Q6IBS0 349 aaKnown RBP11.81□□□□□ -0.52
CACNA1C-227ENST00000491104 ZNF365Q70YC5 407 aa11.81□□□□□ -0.52
CACNA1C-227ENST00000491104 OTOP2Q7RTS6 562 aa11.81□□□□□ -0.52
CACNA1C-227ENST00000491104 ZBTB33Q86T24 672 aa11.81□□□□□ -0.52
CACNA1C-227ENST00000491104 RPUSD2Q8IZ73 545 aaKnown RBP11.81□□□□□ -0.52
CACNA1C-227ENST00000491104 MYOCDQ8IZQ8 938 aa11.81□□□□□ -0.52
CACNA1C-227ENST00000491104 SYCP3Q8IZU3 236 aa11.81□□□□□ -0.52
CACNA1C-227ENST00000491104 SLC17A8Q8NDX2 589 aa11.81□□□□□ -0.52
CACNA1C-227ENST00000491104 ZNF507Q8TCN5 953 aa11.81□□□□□ -0.52
CACNA1C-227ENST00000491104 SYAP1Q96A49 352 aaPredicted RBP11.81□□□□□ -0.52
CACNA1C-227ENST00000491104 HVCN1Q96D96 273 aa11.81□□□□□ -0.52
CACNA1C-227ENST00000491104 PRIMPOLQ96LW4 560 aa11.81□□□□□ -0.52
CACNA1C-227ENST00000491104 ACCSQ96QU6 501 aa11.81□□□□□ -0.52
CACNA1C-227ENST00000491104 ACO2Q99798 780 aaKnown RBP11.81□□□□□ -0.52
CACNA1C-227ENST00000491104 ADAM2Q99965 735 aa11.81□□□□□ -0.52
CACNA1C-227ENST00000491104 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.81□□□□□ -0.52
CACNA1C-227ENST00000491104 EIF2AQ9BY44 585 aaKnown RBP11.81□□□□□ -0.52
CACNA1C-227ENST00000491104 ANKFY1Q9P2R3 1169 aa11.81□□□□□ -0.52
CACNA1C-227ENST00000491104 PCDHB13Q9Y5F0 798 aa11.81□□□□□ -0.52
CACNA1C-227ENST00000491104 UBE4BO95155 1302 aa11.81□□□□□ -0.52
CACNA1C-227ENST00000491104 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.8□□□□□ -0.52
CACNA1C-227ENST00000491104 ZBBXA8MT70 800 aa11.8□□□□□ -0.52
CACNA1C-227ENST00000491104 ABLIM1O14639 778 aa11.8□□□□□ -0.52
CACNA1C-227ENST00000491104 HNRNPDLO14979 420 aaKnown RBP11.8□□□□□ -0.52
CACNA1C-227ENST00000491104 MATR3P43243 847 aaKnown RBP eCLIP11.8□□□□□ -0.52
CACNA1C-227ENST00000491104 ALCAMQ13740 583 aa11.8□□□□□ -0.52
CACNA1C-227ENST00000491104 BMT2Q1RMZ1 405 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms