RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 CDCA3Q99618 268 aaPredicted RBP19.34■□□□□ 0.69
SEC13-218ENST00000490283 TCF25Q9BQ70 676 aa19.34■□□□□ 0.69
SEC13-218ENST00000490283 C2orf40Q9H1Z8 148 aa19.34■□□□□ 0.69
SEC13-218ENST00000490283 NGRNQ9NPE2 291 aaKnown RBP19.34■□□□□ 0.69
SEC13-218ENST00000490283 GPRC5CQ9NQ84 441 aa19.34■□□□□ 0.69
SEC13-218ENST00000490283 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.34■□□□□ 0.69
SEC13-218ENST00000490283 KANSL3Q9P2N6 904 aa19.34■□□□□ 0.69
SEC13-218ENST00000490283 KIAA1024Q9UPX6 916 aa19.34■□□□□ 0.69
SEC13-218ENST00000490283 ARID2Q68CP9 1835 aa19.34■□□□□ 0.69
SEC13-218ENST00000490283 KIAA1671Q9BY89 1806 aa19.34■□□□□ 0.69
SEC13-218ENST00000490283 OFD1O75665 1012 aa19.33■□□□□ 0.68
SEC13-218ENST00000490283 ITGA4P13612 1032 aa19.33■□□□□ 0.68
SEC13-218ENST00000490283 CYP11B2P19099 503 aa19.33■□□□□ 0.68
SEC13-218ENST00000490283 PPP2R5AQ15172 486 aa19.33■□□□□ 0.68
SEC13-218ENST00000490283 TMEM132AQ24JP5 1023 aa19.33■□□□□ 0.68
SEC13-218ENST00000490283 PLPP4Q5VZY2 271 aa19.33■□□□□ 0.68
SEC13-218ENST00000490283 TMC7Q7Z402 723 aa19.33■□□□□ 0.68
SEC13-218ENST00000490283 MRPL10Q7Z7H8 261 aaKnown RBP19.33■□□□□ 0.68
SEC13-218ENST00000490283 ADGRD2Q7Z7M1 963 aa19.33■□□□□ 0.68
SEC13-218ENST00000490283 SLC39A11Q8N1S5 342 aa19.33■□□□□ 0.68
SEC13-218ENST00000490283 FAM193BQ96PV7 902 aaPredicted RBP19.33■□□□□ 0.68
SEC13-218ENST00000490283 GBP3Q9H0R5 595 aa19.33■□□□□ 0.68
SEC13-218ENST00000490283 CSRNP2Q9H175 543 aa19.33■□□□□ 0.68
SEC13-218ENST00000490283 DDX19AQ9NUU7 478 aaKnown RBP19.33■□□□□ 0.68
SEC13-218ENST00000490283 TBC1D13Q9NVG8 400 aa19.33■□□□□ 0.68
SEC13-218ENST00000490283 PRMT7Q9NVM4 692 aaPredicted RBP19.33■□□□□ 0.68
SEC13-218ENST00000490283 GRXCR2A6NFK2 248 aa19.32■□□□□ 0.68
SEC13-218ENST00000490283 NCLP19338 710 aaKnown RBP19.32■□□□□ 0.68
SEC13-218ENST00000490283 CA8P35219 290 aa19.32■□□□□ 0.68
SEC13-218ENST00000490283 GTF2F1P35269 517 aaKnown RBP eCLIP19.32■□□□□ 0.68
SEC13-218ENST00000490283 ERVFC1P60507 584 aa19.32■□□□□ 0.68
SEC13-218ENST00000490283 ADAM15Q13444 863 aa19.32■□□□□ 0.68
SEC13-218ENST00000490283 UBXN11Q5T124 520 aa19.32■□□□□ 0.68
SEC13-218ENST00000490283 DEPTORQ8TB45 409 aa19.32■□□□□ 0.68
SEC13-218ENST00000490283 CPB2Q96IY4 423 aa19.32■□□□□ 0.68
SEC13-218ENST00000490283 IFT74Q96LB3 600 aa19.32■□□□□ 0.68
SEC13-218ENST00000490283 PRIMPOLQ96LW4 560 aa19.32■□□□□ 0.68
SEC13-218ENST00000490283 BHMT2Q9H2M3 363 aa19.32■□□□□ 0.68
SEC13-218ENST00000490283 DNM3Q9UQ16 869 aa19.32■□□□□ 0.68
SEC13-218ENST00000490283 VCANP13611 3396 aa19.31■□□□□ 0.68
SEC13-218ENST00000490283 MEIS3P2A8K0S8 358 aa19.31■□□□□ 0.68
SEC13-218ENST00000490283 FSCN2O14926 492 aa19.31■□□□□ 0.68
SEC13-218ENST00000490283 LINC01565O15544 149 aa19.31■□□□□ 0.68
SEC13-218ENST00000490283 IL9P15248 144 aa19.31■□□□□ 0.68
SEC13-218ENST00000490283 PDCP20941 246 aa19.31■□□□□ 0.68
SEC13-218ENST00000490283 NAMPTP43490 491 aa19.31■□□□□ 0.68
SEC13-218ENST00000490283 ATP2C1P98194 919 aaPredicted RBP19.31■□□□□ 0.68
SEC13-218ENST00000490283 SMC1AQ14683 1233 aaKnown RBP19.31■□□□□ 0.68
SEC13-218ENST00000490283 CLUL1Q15846 466 aa19.31■□□□□ 0.68
SEC13-218ENST00000490283 AGMOQ6ZNB7 445 aa19.31■□□□□ 0.68
SEC13-218ENST00000490283 TMEM87AQ8NBN3 555 aa19.31■□□□□ 0.68
SEC13-218ENST00000490283 KIFAP3Q92845 792 aa19.31■□□□□ 0.68
SEC13-218ENST00000490283 BACH2Q9BYV9 841 aa19.31■□□□□ 0.68
SEC13-218ENST00000490283 CD207Q9UJ71 328 aa19.31■□□□□ 0.68
SEC13-218ENST00000490283 IPPQ9Y573 584 aa19.31■□□□□ 0.68
SEC13-218ENST00000490283 PCDHGC5Q9Y5F6 944 aa19.31■□□□□ 0.68
SEC13-218ENST00000490283 BRWD1Q9NSI6 2320 aa19.31■□□□□ 0.68
SEC13-218ENST00000490283 NT5C1B-RDH14C9J2C7 533 aa19.3■□□□□ 0.68
SEC13-218ENST00000490283 TBX10O75333 385 aa19.3■□□□□ 0.68
SEC13-218ENST00000490283 ARF4P18085 180 aaPredicted RBP19.3■□□□□ 0.68
SEC13-218ENST00000490283 SSTR3P32745 418 aaPredicted RBP19.3■□□□□ 0.68
SEC13-218ENST00000490283 LTBRP36941 435 aa19.3■□□□□ 0.68
SEC13-218ENST00000490283 SMAD4Q13485 552 aaKnown RBP19.3■□□□□ 0.68
SEC13-218ENST00000490283 MAPK6Q16659 721 aa19.3■□□□□ 0.68
SEC13-218ENST00000490283 AMHR2Q16671 573 aa19.3■□□□□ 0.68
SEC13-218ENST00000490283 CDCA2Q69YH5 1023 aaPredicted RBP19.3■□□□□ 0.68
SEC13-218ENST00000490283 SLC27A1Q6PCB7 646 aa19.3■□□□□ 0.68
SEC13-218ENST00000490283 BRAPQ7Z569 592 aa19.3■□□□□ 0.68
SEC13-218ENST00000490283 EIF2AQ9BY44 585 aaKnown RBP19.3■□□□□ 0.68
SEC13-218ENST00000490283 NRDE2Q9H7Z3 1164 aa19.3■□□□□ 0.68
SEC13-218ENST00000490283 STK39Q9UEW8 545 aa19.3■□□□□ 0.68
SEC13-218ENST00000490283 MYO7AQ13402 2215 aa19.3■□□□□ 0.68
SEC13-218ENST00000490283 PER2O15055 1255 aa19.29■□□□□ 0.68
SEC13-218ENST00000490283 EYA4O95677 639 aa19.29■□□□□ 0.68
SEC13-218ENST00000490283 BMP15O95972 392 aa19.29■□□□□ 0.68
SEC13-218ENST00000490283 DLX2Q07687 328 aaPredicted RBP19.29■□□□□ 0.68
SEC13-218ENST00000490283 ZRSR1Q15695 479 aaKnown RBP19.29■□□□□ 0.68
SEC13-218ENST00000490283 ECM1Q16610 540 aa19.29■□□□□ 0.68
SEC13-218ENST00000490283 DUSP6Q16828 381 aa19.29■□□□□ 0.68
SEC13-218ENST00000490283 ARL6IP4Q66PJ3 421 aaKnown RBP19.29■□□□□ 0.68
SEC13-218ENST00000490283 PPP4R3CPQ6ZMV5 832 aa19.29■□□□□ 0.68
SEC13-218ENST00000490283 FAM178BQ8IXR5 827 aa19.29■□□□□ 0.68
SEC13-218ENST00000490283 SMG8Q8ND04 991 aaKnown RBP19.29■□□□□ 0.68
SEC13-218ENST00000490283 CDK5RAP3Q96JB5 506 aa19.29■□□□□ 0.68
SEC13-218ENST00000490283 APOL6Q9BWW8 343 aa19.29■□□□□ 0.68
SEC13-218ENST00000490283 PRKAG3Q9UGI9 489 aa19.29■□□□□ 0.68
SEC13-218ENST00000490283 SPTBN5Q9NRC6 3674 aaKnown RBP19.29■□□□□ 0.68
SEC13-218ENST00000490283 TCF20Q9UGU0 1960 aaKnown RBP19.29■□□□□ 0.68
SEC13-218ENST00000490283 VPS37CA5D8V6 355 aaPredicted RBP19.28■□□□□ 0.68
SEC13-218ENST00000490283 VWA3AA6NCI4 1184 aa19.28■□□□□ 0.68
SEC13-218ENST00000490283 N4BP3O15049 544 aa19.28■□□□□ 0.68
SEC13-218ENST00000490283 B4GALT5O43286 388 aa19.28■□□□□ 0.68
SEC13-218ENST00000490283 NR1I2O75469 434 aa19.28■□□□□ 0.68
SEC13-218ENST00000490283 NPTXRO95502 500 aa19.28■□□□□ 0.68
SEC13-218ENST00000490283 POMCP01189 267 aa19.28■□□□□ 0.68
SEC13-218ENST00000490283 ALDH2P05091 517 aa19.28■□□□□ 0.68
SEC13-218ENST00000490283 GALTP07902 379 aa19.28■□□□□ 0.68
SEC13-218ENST00000490283 LIG1P18858 919 aa19.28■□□□□ 0.68
SEC13-218ENST00000490283 EFNA5P52803 228 aa19.28■□□□□ 0.68
SEC13-218ENST00000490283 PRPF4BQ13523 1007 aaKnown RBP19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms