RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 A0A0U1RQF3 1178 aa19.22■□□□□ 0.67
ERCC3-207ENST00000490062 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.22■□□□□ 0.67
ERCC3-207ENST00000490062 A0A1B0GUA9 196 aa19.22■□□□□ 0.67
ERCC3-207ENST00000490062 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.22■□□□□ 0.67
ERCC3-207ENST00000490062 ZNF623O75123 536 aa19.22■□□□□ 0.67
ERCC3-207ENST00000490062 PPP1R37O75864 691 aa19.22■□□□□ 0.67
ERCC3-207ENST00000490062 FGFR4P22455 802 aa19.22■□□□□ 0.67
ERCC3-207ENST00000490062 SARSP49591 514 aaKnown RBP19.22■□□□□ 0.67
ERCC3-207ENST00000490062 NCBP1Q09161 790 aaKnown RBP19.22■□□□□ 0.67
ERCC3-207ENST00000490062 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.22■□□□□ 0.67
ERCC3-207ENST00000490062 UNC13DQ70J99 1090 aa19.22■□□□□ 0.67
ERCC3-207ENST00000490062 TAS1R3Q7RTX0 852 aa19.22■□□□□ 0.67
ERCC3-207ENST00000490062 CCDC65Q8IXS2 484 aa19.22■□□□□ 0.67
ERCC3-207ENST00000490062 MYCT1Q8N699 235 aa19.22■□□□□ 0.67
ERCC3-207ENST00000490062 CCDC34Q96HJ3 373 aa19.22■□□□□ 0.67
ERCC3-207ENST00000490062 CCDC169A6NNP5 214 aa19.21■□□□□ 0.67
ERCC3-207ENST00000490062 ZBBXA8MT70 800 aa19.21■□□□□ 0.67
ERCC3-207ENST00000490062 K7ERI5 159 aa19.21■□□□□ 0.67
ERCC3-207ENST00000490062 SLC16A4O15374 487 aa19.21■□□□□ 0.67
ERCC3-207ENST00000490062 GTPBP6O43824 516 aaPredicted RBP19.21■□□□□ 0.67
ERCC3-207ENST00000490062 GADD45BO75293 160 aaPredicted RBP19.21■□□□□ 0.67
ERCC3-207ENST00000490062 GJB5O95377 273 aa19.21■□□□□ 0.67
ERCC3-207ENST00000490062 PRKCBP05771 671 aa19.21■□□□□ 0.67
ERCC3-207ENST00000490062 SKIP12755 728 aa19.21■□□□□ 0.67
ERCC3-207ENST00000490062 ATP2A2P16615 1042 aaKnown RBP19.21■□□□□ 0.67
ERCC3-207ENST00000490062 ARF4P18085 180 aaPredicted RBP19.21■□□□□ 0.67
ERCC3-207ENST00000490062 RAB27AP51159 221 aa19.21■□□□□ 0.67
ERCC3-207ENST00000490062 DEFB103AP81534 67 aa19.21■□□□□ 0.67
ERCC3-207ENST00000490062 SMAD3P84022 425 aaKnown RBP19.21■□□□□ 0.67
ERCC3-207ENST00000490062 GTF2BQ00403 316 aa19.21■□□□□ 0.67
ERCC3-207ENST00000490062 NOTUMQ6P988 496 aa19.21■□□□□ 0.67
ERCC3-207ENST00000490062 ZNF720Q7Z2F6 126 aa19.21■□□□□ 0.67
ERCC3-207ENST00000490062 HAUS6Q7Z4H7 955 aa19.21■□□□□ 0.67
ERCC3-207ENST00000490062 NPAS4Q8IUM7 802 aa19.21■□□□□ 0.67
ERCC3-207ENST00000490062 FAM178BQ8IXR5 827 aa19.21■□□□□ 0.67
ERCC3-207ENST00000490062 CNNM3Q8NE01 707 aa19.21■□□□□ 0.67
ERCC3-207ENST00000490062 RSPH1Q8WYR4 309 aa19.21■□□□□ 0.67
ERCC3-207ENST00000490062 STAMQ92783 540 aa19.21■□□□□ 0.67
ERCC3-207ENST00000490062 HVCN1Q96D96 273 aa19.21■□□□□ 0.67
ERCC3-207ENST00000490062 KIFC3Q9BVG8 833 aa19.21■□□□□ 0.67
ERCC3-207ENST00000490062 PANK4Q9NVE7 773 aa19.21■□□□□ 0.67
ERCC3-207ENST00000490062 PIN4Q9Y237 131 aaKnown RBP19.21■□□□□ 0.67
ERCC3-207ENST00000490062 DENND3A2RUS2 1198 aa19.2■□□□□ 0.66
ERCC3-207ENST00000490062 EOMESO95936 686 aa19.2■□□□□ 0.66
ERCC3-207ENST00000490062 PIGRP01833 764 aa19.2■□□□□ 0.66
ERCC3-207ENST00000490062 HTRA4P83105 476 aaPredicted RBP19.2■□□□□ 0.66
ERCC3-207ENST00000490062 ALCAMQ13740 583 aa19.2■□□□□ 0.66
ERCC3-207ENST00000490062 UBXN11Q5T124 520 aa19.2■□□□□ 0.66
ERCC3-207ENST00000490062 ZPBP2Q6X784 338 aa19.2■□□□□ 0.66
ERCC3-207ENST00000490062 ZNF598Q86UK7 904 aaKnown RBP19.2■□□□□ 0.66
ERCC3-207ENST00000490062 SFR1Q86XK3 245 aa19.2■□□□□ 0.66
ERCC3-207ENST00000490062 HERC6Q8IVU3 1022 aa19.2■□□□□ 0.66
ERCC3-207ENST00000490062 RC3H2Q9HBD1 1191 aaKnown RBP19.2■□□□□ 0.66
ERCC3-207ENST00000490062 TMEM161AQ9NX61 479 aa19.2■□□□□ 0.66
ERCC3-207ENST00000490062 KLRC4O43908 158 aa19.19■□□□□ 0.66
ERCC3-207ENST00000490062 EDN1P05305 212 aa19.19■□□□□ 0.66
ERCC3-207ENST00000490062 STAG3L1P0CL83 205 aa19.19■□□□□ 0.66
ERCC3-207ENST00000490062 ASIC1P78348 528 aa19.19■□□□□ 0.66
ERCC3-207ENST00000490062 COASYQ13057 564 aa19.19■□□□□ 0.66
ERCC3-207ENST00000490062 PRPF4BQ13523 1007 aaKnown RBP19.19■□□□□ 0.66
ERCC3-207ENST00000490062 CUL4BQ13620 913 aa19.19■□□□□ 0.66
ERCC3-207ENST00000490062 HERC4Q5GLZ8 1057 aaPredicted RBP19.19■□□□□ 0.66
ERCC3-207ENST00000490062 MRPL10Q7Z7H8 261 aaKnown RBP19.19■□□□□ 0.66
ERCC3-207ENST00000490062 ECHDC2Q86YB7 292 aa19.19■□□□□ 0.66
ERCC3-207ENST00000490062 MAP4K3Q8IVH8 894 aa19.19■□□□□ 0.66
ERCC3-207ENST00000490062 MRPL4Q9BYD3 311 aaKnown RBP19.19■□□□□ 0.66
ERCC3-207ENST00000490062 PTPRHQ9HD43 1115 aa19.19■□□□□ 0.66
ERCC3-207ENST00000490062 TNFSF13BQ9Y275 285 aa19.19■□□□□ 0.66
ERCC3-207ENST00000490062 ZMYM2Q9UBW7 1377 aa19.19■□□□□ 0.66
ERCC3-207ENST00000490062 N4BP3O15049 544 aa19.18■□□□□ 0.66
ERCC3-207ENST00000490062 B4GALT5O43286 388 aa19.18■□□□□ 0.66
ERCC3-207ENST00000490062 PRPF40AO75400 957 aaKnown RBP19.18■□□□□ 0.66
ERCC3-207ENST00000490062 NR1I2O75469 434 aa19.18■□□□□ 0.66
ERCC3-207ENST00000490062 IDEP14735 1019 aa19.18■□□□□ 0.66
ERCC3-207ENST00000490062 LIG1P18858 919 aa19.18■□□□□ 0.66
ERCC3-207ENST00000490062 PROZP22891 400 aa19.18■□□□□ 0.66
ERCC3-207ENST00000490062 AFMP43652 599 aa19.18■□□□□ 0.66
ERCC3-207ENST00000490062 DPYDQ12882 1025 aa19.18■□□□□ 0.66
ERCC3-207ENST00000490062 NT5DC1Q5TFE4 455 aa19.18■□□□□ 0.66
ERCC3-207ENST00000490062 SLC27A1Q6PCB7 646 aa19.18■□□□□ 0.66
ERCC3-207ENST00000490062 MYOCDQ8IZQ8 938 aa19.18■□□□□ 0.66
ERCC3-207ENST00000490062 SP7Q8TDD2 431 aaPredicted RBP19.18■□□□□ 0.66
ERCC3-207ENST00000490062 ZNF689Q96CS4 500 aaPredicted RBP19.18■□□□□ 0.66
ERCC3-207ENST00000490062 ACO2Q99798 780 aaKnown RBP19.18■□□□□ 0.66
ERCC3-207ENST00000490062 LMBRD1Q9NUN5 540 aa19.18■□□□□ 0.66
ERCC3-207ENST00000490062 FAM105AQ9NUU6 356 aa19.18■□□□□ 0.66
ERCC3-207ENST00000490062 PCDHA11Q9Y5I1 949 aa19.18■□□□□ 0.66
ERCC3-207ENST00000490062 TTLL13PA6NNM8 815 aa19.17■□□□□ 0.66
ERCC3-207ENST00000490062 RBAK-RBAKDNI3L0D1 243 aa19.17■□□□□ 0.66
ERCC3-207ENST00000490062 K7ENM7 598 aa19.17■□□□□ 0.66
ERCC3-207ENST00000490062 ABLIM1O14639 778 aa19.17■□□□□ 0.66
ERCC3-207ENST00000490062 ATF7P17544 494 aaPredicted RBP19.17■□□□□ 0.66
ERCC3-207ENST00000490062 STRN3Q13033 797 aa19.17■□□□□ 0.66
ERCC3-207ENST00000490062 HABP4Q5JVS0 413 aaKnown RBP19.17■□□□□ 0.66
ERCC3-207ENST00000490062 TWF2Q6IBS0 349 aaKnown RBP19.17■□□□□ 0.66
ERCC3-207ENST00000490062 FAM109BQ6ICB4 259 aaPredicted RBP19.17■□□□□ 0.66
ERCC3-207ENST00000490062 GRAMD1CQ8IYS0 662 aa19.17■□□□□ 0.66
ERCC3-207ENST00000490062 SPATA20Q8TB22 786 aa19.17■□□□□ 0.66
ERCC3-207ENST00000490062 RAD9AQ99638 391 aa19.17■□□□□ 0.66
ERCC3-207ENST00000490062 BLZF1Q9H2G9 400 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms