RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 PUF60Q9UHX1 559 aaKnown RBP15.78■□□□□ 0.12
BRCA1-218ENST00000489037 INPP5FQ9Y2H2 1132 aa15.78■□□□□ 0.12
BRCA1-218ENST00000489037 BRWD1Q9NSI6 2320 aa15.77■□□□□ 0.12
BRCA1-218ENST00000489037 PHLPP2Q6ZVD8 1323 aa15.77■□□□□ 0.12
BRCA1-218ENST00000489037 TRANK1O15050 2925 aa15.77■□□□□ 0.12
BRCA1-218ENST00000489037 CCDC169A6NNP5 214 aa15.77■□□□□ 0.12
BRCA1-218ENST00000489037 ITGB1P05556 798 aa15.77■□□□□ 0.12
BRCA1-218ENST00000489037 PLA2G4BP0C869 781 aa15.77■□□□□ 0.12
BRCA1-218ENST00000489037 ARF4P18085 180 aaPredicted RBP15.77■□□□□ 0.12
BRCA1-218ENST00000489037 LIG1P18858 919 aa15.77■□□□□ 0.12
BRCA1-218ENST00000489037 NCLP19338 710 aaKnown RBP15.77■□□□□ 0.12
BRCA1-218ENST00000489037 MARCKSP29966 332 aaPredicted RBP15.77■□□□□ 0.12
BRCA1-218ENST00000489037 PPM1AP35813 382 aa15.77■□□□□ 0.12
BRCA1-218ENST00000489037 ALDH7A1P49419 539 aaKnown RBP15.77■□□□□ 0.12
BRCA1-218ENST00000489037 KRT17Q04695 432 aa15.77■□□□□ 0.12
BRCA1-218ENST00000489037 UBE3AQ05086 875 aa15.77■□□□□ 0.12
BRCA1-218ENST00000489037 DMP1Q13316 513 aaPredicted RBP15.77■□□□□ 0.12
BRCA1-218ENST00000489037 PRPF4BQ13523 1007 aaKnown RBP15.77■□□□□ 0.12
BRCA1-218ENST00000489037 NOMO2Q5JPE7 1267 aa15.77■□□□□ 0.12
BRCA1-218ENST00000489037 CDCA2Q69YH5 1023 aaPredicted RBP15.77■□□□□ 0.12
BRCA1-218ENST00000489037 FAM173BQ6P4H8 233 aa15.77■□□□□ 0.12
BRCA1-218ENST00000489037 SLC27A1Q6PCB7 646 aa15.77■□□□□ 0.12
BRCA1-218ENST00000489037 PPP4R3CPQ6ZMV5 832 aa15.77■□□□□ 0.12
BRCA1-218ENST00000489037 MRPL10Q7Z7H8 261 aaKnown RBP15.77■□□□□ 0.12
BRCA1-218ENST00000489037 SYT2Q8N9I0 419 aaPredicted RBP15.77■□□□□ 0.12
BRCA1-218ENST00000489037 SPRYD3Q8NCJ5 442 aa15.77■□□□□ 0.12
BRCA1-218ENST00000489037 HLA-CQ95604 372 aa15.77■□□□□ 0.12
BRCA1-218ENST00000489037 FAM193BQ96PV7 902 aaPredicted RBP15.77■□□□□ 0.12
BRCA1-218ENST00000489037 CWH43Q9H720 699 aa15.77■□□□□ 0.12
BRCA1-218ENST00000489037 RSAD1Q9HA92 442 aa15.77■□□□□ 0.12
BRCA1-218ENST00000489037 C17orf75Q9HAS0 396 aa15.77■□□□□ 0.12
BRCA1-218ENST00000489037 PRDM6Q9NQX0 595 aa15.77■□□□□ 0.12
BRCA1-218ENST00000489037 KCND2Q9NZV8 630 aa15.77■□□□□ 0.12
BRCA1-218ENST00000489037 KANSL3Q9P2N6 904 aa15.77■□□□□ 0.12
BRCA1-218ENST00000489037 CCDC39Q9UFE4 941 aa15.77■□□□□ 0.12
BRCA1-218ENST00000489037 PLXNA4Q9HCM2 1894 aa15.76■□□□□ 0.11
BRCA1-218ENST00000489037 K7ERI5 159 aa15.76■□□□□ 0.11
BRCA1-218ENST00000489037 N4BP3O15049 544 aa15.76■□□□□ 0.11
BRCA1-218ENST00000489037 HIP1RO75146 1068 aa15.76■□□□□ 0.11
BRCA1-218ENST00000489037 FGF18O76093 207 aa15.76■□□□□ 0.11
BRCA1-218ENST00000489037 PRKCBP05771 671 aa15.76■□□□□ 0.11
BRCA1-218ENST00000489037 PEX3P56589 373 aa15.76■□□□□ 0.11
BRCA1-218ENST00000489037 MRPS5P82675 430 aaKnown RBP15.76■□□□□ 0.11
BRCA1-218ENST00000489037 STK38Q15208 465 aa15.76■□□□□ 0.11
BRCA1-218ENST00000489037 PTPAQ15257 358 aa15.76■□□□□ 0.11
BRCA1-218ENST00000489037 AMHR2Q16671 573 aa15.76■□□□□ 0.11
BRCA1-218ENST00000489037 FAM187BQ17R55 369 aa15.76■□□□□ 0.11
BRCA1-218ENST00000489037 TMEM119Q4V9L6 283 aa15.76■□□□□ 0.11
BRCA1-218ENST00000489037 UBXN11Q5T124 520 aa15.76■□□□□ 0.11
BRCA1-218ENST00000489037 KCNT2Q6UVM3 1135 aa15.76■□□□□ 0.11
BRCA1-218ENST00000489037 C1orf186Q6ZWK4 172 aa15.76■□□□□ 0.11
BRCA1-218ENST00000489037 KCNK18Q7Z418 384 aa15.76■□□□□ 0.11
BRCA1-218ENST00000489037 APBB1IPQ7Z5R6 666 aaPredicted RBP15.76■□□□□ 0.11
BRCA1-218ENST00000489037 SPPL3Q8TCT6 385 aa15.76■□□□□ 0.11
BRCA1-218ENST00000489037 MICAL1Q8TDZ2 1067 aa15.76■□□□□ 0.11
BRCA1-218ENST00000489037 POF1BQ8WVV4 589 aa15.76■□□□□ 0.11
BRCA1-218ENST00000489037 BSNDQ8WZ55 320 aa15.76■□□□□ 0.11
BRCA1-218ENST00000489037 ADPGKQ9BRR6 497 aa15.76■□□□□ 0.11
BRCA1-218ENST00000489037 FZD8Q9H461 694 aa15.76■□□□□ 0.11
BRCA1-218ENST00000489037 POLD4Q9HCU8 107 aa15.76■□□□□ 0.11
BRCA1-218ENST00000489037 SRPRBQ9Y5M8 271 aaKnown RBP15.76■□□□□ 0.11
BRCA1-218ENST00000489037 TDRD15B5MCY1 1934 aaKnown RBP15.76■□□□□ 0.11
BRCA1-218ENST00000489037 A0A1B0GUA9 196 aa15.75■□□□□ 0.11
BRCA1-218ENST00000489037 ACKR2O00590 384 aa15.75■□□□□ 0.11
BRCA1-218ENST00000489037 NCK2O43639 380 aa15.75■□□□□ 0.11
BRCA1-218ENST00000489037 OFD1O75665 1012 aa15.75■□□□□ 0.11
BRCA1-218ENST00000489037 CSPG5O95196 566 aa15.75■□□□□ 0.11
BRCA1-218ENST00000489037 NPTXRO95502 500 aa15.75■□□□□ 0.11
BRCA1-218ENST00000489037 KRT18P05783 430 aaKnown RBP15.75■□□□□ 0.11
BRCA1-218ENST00000489037 GUCY2CP25092 1073 aa15.75■□□□□ 0.11
BRCA1-218ENST00000489037 SMTNP53814 917 aa15.75■□□□□ 0.11
BRCA1-218ENST00000489037 BMS1Q14692 1282 aaKnown RBP15.75■□□□□ 0.11
BRCA1-218ENST00000489037 SLC39A14Q15043 492 aa15.75■□□□□ 0.11
BRCA1-218ENST00000489037 FOXD4L5Q5VV16 416 aaPredicted RBP15.75■□□□□ 0.11
BRCA1-218ENST00000489037 LRRC55Q6ZSA7 311 aa15.75■□□□□ 0.11
BRCA1-218ENST00000489037 FOXD4L4Q8WXT5 416 aaPredicted RBP15.75■□□□□ 0.11
BRCA1-218ENST00000489037 SYMPKQ92797 1274 aaKnown RBP15.75■□□□□ 0.11
BRCA1-218ENST00000489037 USP28Q96RU2 1077 aa15.75■□□□□ 0.11
BRCA1-218ENST00000489037 RUSC1Q9BVN2 902 aa15.75■□□□□ 0.11
BRCA1-218ENST00000489037 APOL6Q9BWW8 343 aa15.75■□□□□ 0.11
BRCA1-218ENST00000489037 EIF2AQ9BY44 585 aaKnown RBP15.75■□□□□ 0.11
BRCA1-218ENST00000489037 CCSER1Q9C0I3 900 aa15.75■□□□□ 0.11
BRCA1-218ENST00000489037 KMT5AQ9NQR1 393 aa15.75■□□□□ 0.11
BRCA1-218ENST00000489037 SPG21Q9NZD8 308 aa15.75■□□□□ 0.11
BRCA1-218ENST00000489037 RBM19Q9Y4C8 960 aaKnown RBP15.75■□□□□ 0.11
BRCA1-218ENST00000489037 IPPQ9Y573 584 aa15.75■□□□□ 0.11
BRCA1-218ENST00000489037 B4GALT5O43286 388 aa15.74■□□□□ 0.11
BRCA1-218ENST00000489037 ZC3H11AO75152 810 aaKnown RBP eCLIP15.74■□□□□ 0.11
BRCA1-218ENST00000489037 ZSCAN22P10073 491 aaPredicted RBP15.74■□□□□ 0.11
BRCA1-218ENST00000489037 SLC12A3P55017 1021 aa15.74■□□□□ 0.11
BRCA1-218ENST00000489037 PLCB3Q01970 1234 aa15.74■□□□□ 0.11
BRCA1-218ENST00000489037 GRIN1Q05586 938 aa15.74■□□□□ 0.11
BRCA1-218ENST00000489037 DHX8Q14562 1220 aaKnown RBP15.74■□□□□ 0.11
BRCA1-218ENST00000489037 KARSQ15046 597 aaKnown RBP15.74■□□□□ 0.11
BRCA1-218ENST00000489037 TCEAL5Q5H9L2 206 aa15.74■□□□□ 0.11
BRCA1-218ENST00000489037 PDE12Q6L8Q7 609 aaKnown RBP15.74■□□□□ 0.11
BRCA1-218ENST00000489037 AGMOQ6ZNB7 445 aa15.74■□□□□ 0.11
BRCA1-218ENST00000489037 EP400NLQ6ZTU2 488 aa15.74■□□□□ 0.11
BRCA1-218ENST00000489037 KRI1Q8N9T8 703 aaKnown RBP15.74■□□□□ 0.11
BRCA1-218ENST00000489037 GBP3Q9H0R5 595 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms