RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 LRRC74BQ6ZQY2 392 aa17.34■□□□□ 0.37
MCF2L-229ENST00000488765 COL23A1Q86Y22 540 aaPredicted RBP17.34■□□□□ 0.37
MCF2L-229ENST00000488765 ZNF34Q8IZ26 560 aa17.34■□□□□ 0.37
MCF2L-229ENST00000488765 SLC25A41Q8N5S1 370 aa17.34■□□□□ 0.37
MCF2L-229ENST00000488765 ALG3Q92685 438 aa17.34■□□□□ 0.37
MCF2L-229ENST00000488765 KCPQ6ZWJ8 1503 aa17.34■□□□□ 0.37
MCF2L-229ENST00000488765 BCL9O00512 1426 aa17.34■□□□□ 0.37
MCF2L-229ENST00000488765 GFPT2O94808 682 aa17.34■□□□□ 0.37
MCF2L-229ENST00000488765 LYNP07948 512 aa17.34■□□□□ 0.37
MCF2L-229ENST00000488765 DESP17661 470 aa17.34■□□□□ 0.37
MCF2L-229ENST00000488765 RASSF2P50749 326 aa17.34■□□□□ 0.37
MCF2L-229ENST00000488765 DYNLL1P63167 89 aaKnown RBP17.34■□□□□ 0.37
MCF2L-229ENST00000488765 POU5F1Q01860 360 aaKnown RBP17.34■□□□□ 0.37
MCF2L-229ENST00000488765 CTTNQ14247 550 aaKnown RBP17.34■□□□□ 0.37
MCF2L-229ENST00000488765 TMTC3Q6ZXV5 915 aa17.34■□□□□ 0.37
MCF2L-229ENST00000488765 CPNE8Q86YQ8 564 aa17.34■□□□□ 0.37
MCF2L-229ENST00000488765 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.34■□□□□ 0.37
MCF2L-229ENST00000488765 CKAP2Q8WWK9 683 aa17.34■□□□□ 0.37
MCF2L-229ENST00000488765 CELF1Q92879 486 aaKnown RBP17.34■□□□□ 0.37
MCF2L-229ENST00000488765 PTPRN2Q92932 1015 aa17.34■□□□□ 0.37
MCF2L-229ENST00000488765 ERLEC1Q96DZ1 483 aa17.34■□□□□ 0.37
MCF2L-229ENST00000488765 MPP4Q96JB8 637 aa17.34■□□□□ 0.37
MCF2L-229ENST00000488765 FAM118BQ9BPY3 351 aa17.34■□□□□ 0.37
MCF2L-229ENST00000488765 C12orf65Q9H3J6 166 aaKnown RBP17.34■□□□□ 0.37
MCF2L-229ENST00000488765 DCLRE1BQ9H816 532 aa17.34■□□□□ 0.37
MCF2L-229ENST00000488765 RBM47A0AV96 593 aaKnown RBP17.34■□□□□ 0.37
MCF2L-229ENST00000488765 LRRC55Q6ZSA7 311 aa17.34■□□□□ 0.37
MCF2L-229ENST00000488765 GLYCTKQ8IVS8 523 aa17.34■□□□□ 0.37
MCF2L-229ENST00000488765 NAP1L3Q99457 506 aaPredicted RBP17.34■□□□□ 0.37
MCF2L-229ENST00000488765 NUDT12Q9BQG2 462 aa17.34■□□□□ 0.37
MCF2L-229ENST00000488765 VCX3BQ9H321 246 aa17.34■□□□□ 0.37
MCF2L-229ENST00000488765 VCX3AQ9NNX9 186 aa17.34■□□□□ 0.37
MCF2L-229ENST00000488765 PGM3O95394 542 aa17.33■□□□□ 0.37
MCF2L-229ENST00000488765 CETPP11597 493 aa17.33■□□□□ 0.37
MCF2L-229ENST00000488765 GALK1P51570 392 aa17.33■□□□□ 0.37
MCF2L-229ENST00000488765 IGBP1P78318 339 aa17.33■□□□□ 0.37
MCF2L-229ENST00000488765 THOC5Q13769 683 aaKnown RBP17.33■□□□□ 0.37
MCF2L-229ENST00000488765 TMEM266Q2M3C6 531 aa17.33■□□□□ 0.37
MCF2L-229ENST00000488765 MDH1BQ5I0G3 518 aa17.33■□□□□ 0.37
MCF2L-229ENST00000488765 TTC27Q6P3X3 843 aa17.33■□□□□ 0.37
MCF2L-229ENST00000488765 LRMDAQ9H2I8 198 aa17.33■□□□□ 0.37
MCF2L-229ENST00000488765 CDC42EP4Q9H3Q1 356 aaKnown RBP17.33■□□□□ 0.37
MCF2L-229ENST00000488765 NPHS2Q9NP85 383 aa17.33■□□□□ 0.37
MCF2L-229ENST00000488765 NKIRAS1Q9NYS0 192 aa17.33■□□□□ 0.37
MCF2L-229ENST00000488765 GRHL1Q9NZI5 618 aa17.33■□□□□ 0.37
MCF2L-229ENST00000488765 SEC63Q9UGP8 760 aaKnown RBP17.33■□□□□ 0.37
MCF2L-229ENST00000488765 SPATA31A1Q5TZJ5 1347 aa17.33■□□□□ 0.36
MCF2L-229ENST00000488765 POTEMA6NI47 508 aa17.33■□□□□ 0.36
MCF2L-229ENST00000488765 H2AFZP0C0S5 128 aa17.33■□□□□ 0.36
MCF2L-229ENST00000488765 TAC1P20366 129 aa17.33■□□□□ 0.36
MCF2L-229ENST00000488765 GALCP54803 685 aa17.33■□□□□ 0.36
MCF2L-229ENST00000488765 CDR2Q01850 454 aa17.33■□□□□ 0.36
MCF2L-229ENST00000488765 H2AFVQ71UI9 128 aa17.33■□□□□ 0.36
MCF2L-229ENST00000488765 SV2BQ7L1I2 683 aa17.33■□□□□ 0.36
MCF2L-229ENST00000488765 SLC35G2Q8TBE7 412 aa17.33■□□□□ 0.36
MCF2L-229ENST00000488765 PRR11Q96HE9 360 aaPredicted RBP17.33■□□□□ 0.36
MCF2L-229ENST00000488765 SMC6Q96SB8 1091 aa17.33■□□□□ 0.36
MCF2L-229ENST00000488765 AJAP1Q9UKB5 411 aaPredicted RBP17.33■□□□□ 0.36
MCF2L-229ENST00000488765 PHTF1Q9UMS5 762 aa17.33■□□□□ 0.36
MCF2L-229ENST00000488765 COL4A3BPQ9Y5P4 624 aa17.33■□□□□ 0.36
MCF2L-229ENST00000488765 CNTNAP5Q8WYK1 1306 aa17.32■□□□□ 0.36
MCF2L-229ENST00000488765 IGSF9BQ9UPX0 1349 aa17.32■□□□□ 0.36
MCF2L-229ENST00000488765 CAMTA2O94983 1202 aa17.32■□□□□ 0.36
MCF2L-229ENST00000488765 CHKAP35790 457 aa17.32■□□□□ 0.36
MCF2L-229ENST00000488765 ARMCX6Q7L4S7 300 aa17.32■□□□□ 0.36
MCF2L-229ENST00000488765 C4orf33Q8N1A6 199 aa17.32■□□□□ 0.36
MCF2L-229ENST00000488765 PPFIBP2Q8ND30 876 aa17.32■□□□□ 0.36
MCF2L-229ENST00000488765 KRT35Q92764 455 aa17.32■□□□□ 0.36
MCF2L-229ENST00000488765 STMN2Q93045 179 aa17.32■□□□□ 0.36
MCF2L-229ENST00000488765 CLMNQ96JQ2 1002 aa17.32■□□□□ 0.36
MCF2L-229ENST00000488765 MAF1Q9H063 256 aa17.32■□□□□ 0.36
MCF2L-229ENST00000488765 MTRF1LQ9UGC7 380 aaKnown RBP17.32■□□□□ 0.36
MCF2L-229ENST00000488765 SIGLEC16A6NMB1 481 aa17.32■□□□□ 0.36
MCF2L-229ENST00000488765 MARK3P27448 753 aa17.32■□□□□ 0.36
MCF2L-229ENST00000488765 WDR72Q3MJ13 1102 aa17.32■□□□□ 0.36
MCF2L-229ENST00000488765 ARL6IP4Q66PJ3 421 aaKnown RBP17.32■□□□□ 0.36
MCF2L-229ENST00000488765 IZUMO2Q6UXV1 221 aa17.32■□□□□ 0.36
MCF2L-229ENST00000488765 AGGF1Q8N302 714 aaeCLIP17.32■□□□□ 0.36
MCF2L-229ENST00000488765 RBM46Q8TBY0 533 aaKnown RBP17.32■□□□□ 0.36
MCF2L-229ENST00000488765 TRAPPC9Q96Q05 1148 aa17.32■□□□□ 0.36
MCF2L-229ENST00000488765 ARHGEF38Q9NXL2 777 aa17.32■□□□□ 0.36
MCF2L-229ENST00000488765 ZNF510Q9Y2H8 683 aa17.32■□□□□ 0.36
MCF2L-229ENST00000488765 SIPA1L3O60292 1781 aaPredicted RBP17.32■□□□□ 0.36
MCF2L-229ENST00000488765 POLGP54098 1239 aaPredicted RBP17.32■□□□□ 0.36
MCF2L-229ENST00000488765 TBC1D9BQ66K14 1250 aa17.32■□□□□ 0.36
MCF2L-229ENST00000488765 CYP4F22Q6NT55 531 aa17.32■□□□□ 0.36
MCF2L-229ENST00000488765 C4orf50Q6ZRC1 276 aa17.32■□□□□ 0.36
MCF2L-229ENST00000488765 KCNK18Q7Z418 384 aa17.32■□□□□ 0.36
MCF2L-229ENST00000488765 SATL1Q86VE3 508 aa17.32■□□□□ 0.36
MCF2L-229ENST00000488765 LCA5Q86VQ0 697 aa17.32■□□□□ 0.36
MCF2L-229ENST00000488765 ZDHHC14Q8IZN3 488 aa17.32■□□□□ 0.36
MCF2L-229ENST00000488765 VPS52Q8N1B4 723 aa17.32■□□□□ 0.36
MCF2L-229ENST00000488765 LINC00116Q8NCU8 138 aa17.32■□□□□ 0.36
MCF2L-229ENST00000488765 CEP70Q8NHQ1 597 aa17.32■□□□□ 0.36
MCF2L-229ENST00000488765 CADM1Q9BY67 442 aaKnown RBP17.32■□□□□ 0.36
MCF2L-229ENST00000488765 ECM29Q5VYK3 1845 aa17.32■□□□□ 0.36
MCF2L-229ENST00000488765 MAP3K7O43318 606 aa17.31■□□□□ 0.36
MCF2L-229ENST00000488765 GYS1P13807 737 aa17.31■□□□□ 0.36
MCF2L-229ENST00000488765 MAPK7Q13164 816 aa17.31■□□□□ 0.36
MCF2L-229ENST00000488765 GIT2Q14161 759 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms