RNA–Protein interactions for RNA: ENST00000487427.5

ITSN1-229, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 805 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-229ENST00000487427 RNF25Q96BH1 459 aaPredicted RBP13.82□□□□□ -0.2
ITSN1-229ENST00000487427 CCDC51Q96ER9 411 aa13.82□□□□□ -0.2
ITSN1-229ENST00000487427 RAB34Q9BZG1 259 aa13.82□□□□□ -0.2
ITSN1-229ENST00000487427 POLR3FQ9H1D9 316 aaPredicted RBP13.82□□□□□ -0.2
ITSN1-229ENST00000487427 NGRNQ9NPE2 291 aaKnown RBP13.82□□□□□ -0.2
ITSN1-229ENST00000487427 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.82□□□□□ -0.2
ITSN1-229ENST00000487427 XIRP2A4UGR9 3374 aa13.82□□□□□ -0.2
ITSN1-229ENST00000487427 FSD2A1L4K1 749 aa13.81□□□□□ -0.2
ITSN1-229ENST00000487427 ARHGEF35A5YM69 484 aa13.81□□□□□ -0.2
ITSN1-229ENST00000487427 MEIS3P2A8K0S8 358 aa13.81□□□□□ -0.2
ITSN1-229ENST00000487427 H3BQV1 296 aa13.81□□□□□ -0.2
ITSN1-229ENST00000487427 FSCN2O14926 492 aa13.81□□□□□ -0.2
ITSN1-229ENST00000487427 LINC01565O15544 149 aa13.81□□□□□ -0.2
ITSN1-229ENST00000487427 TSPAN1O60635 241 aa13.81□□□□□ -0.2
ITSN1-229ENST00000487427 CHRM1P11229 460 aaPredicted RBP13.81□□□□□ -0.2
ITSN1-229ENST00000487427 CYP11B2P19099 503 aa13.81□□□□□ -0.2
ITSN1-229ENST00000487427 PBX3P40426 434 aa13.81□□□□□ -0.2
ITSN1-229ENST00000487427 PRPHP41219 470 aa13.81□□□□□ -0.2
ITSN1-229ENST00000487427 BCAR1P56945 870 aa13.81□□□□□ -0.2
ITSN1-229ENST00000487427 RNASELQ05823 741 aaKnown RBP13.81□□□□□ -0.2
ITSN1-229ENST00000487427 MBTD1Q05BQ5 628 aa13.81□□□□□ -0.2
ITSN1-229ENST00000487427 DLX2Q07687 328 aaPredicted RBP13.81□□□□□ -0.2
ITSN1-229ENST00000487427 RILPL1Q5EBL4 403 aa13.81□□□□□ -0.2
ITSN1-229ENST00000487427 NOTUMQ6P988 496 aa13.81□□□□□ -0.2
ITSN1-229ENST00000487427 PADI6Q6TGC4 694 aa13.81□□□□□ -0.2
ITSN1-229ENST00000487427 AGMOQ6ZNB7 445 aa13.81□□□□□ -0.2
ITSN1-229ENST00000487427 MAEAQ7L5Y9 396 aa13.81□□□□□ -0.2
ITSN1-229ENST00000487427 RBM23Q86U06 439 aaKnown RBP13.81□□□□□ -0.2
ITSN1-229ENST00000487427 SLC39A11Q8N1S5 342 aa13.81□□□□□ -0.2
ITSN1-229ENST00000487427 IGSF22Q8N9C0 903 aa13.81□□□□□ -0.2
ITSN1-229ENST00000487427 CDCA3Q99618 268 aaPredicted RBP13.81□□□□□ -0.2
ITSN1-229ENST00000487427 UBN1Q9NPG3 1134 aa13.81□□□□□ -0.2
ITSN1-229ENST00000487427 TBC1D13Q9NVG8 400 aa13.81□□□□□ -0.2
ITSN1-229ENST00000487427 KANSL3Q9P2N6 904 aa13.81□□□□□ -0.2
ITSN1-229ENST00000487427 SMC3Q9UQE7 1217 aa13.81□□□□□ -0.2
ITSN1-229ENST00000487427 INPP5FQ9Y2H2 1132 aa13.81□□□□□ -0.2
ITSN1-229ENST00000487427 PCDHGC5Q9Y5F6 944 aa13.81□□□□□ -0.2
ITSN1-229ENST00000487427 CNTNAP2Q9UHC6 1331 aa13.81□□□□□ -0.2
ITSN1-229ENST00000487427 SPTBN5Q9NRC6 3674 aaKnown RBP13.8□□□□□ -0.2
ITSN1-229ENST00000487427 NLRC5Q86WI3 1866 aa13.8□□□□□ -0.2
ITSN1-229ENST00000487427 IL9P15248 144 aa13.8□□□□□ -0.2
ITSN1-229ENST00000487427 NCLP19338 710 aaKnown RBP13.8□□□□□ -0.2
ITSN1-229ENST00000487427 NDUFV1P49821 464 aa13.8□□□□□ -0.2
ITSN1-229ENST00000487427 AMHR2Q16671 573 aa13.8□□□□□ -0.2
ITSN1-229ENST00000487427 DTHD1Q6ZMT9 781 aa13.8□□□□□ -0.2
ITSN1-229ENST00000487427 TMC7Q7Z402 723 aa13.8□□□□□ -0.2
ITSN1-229ENST00000487427 URGCPQ8TCY9 931 aa13.8□□□□□ -0.2
ITSN1-229ENST00000487427 TCF25Q9BQ70 676 aa13.8□□□□□ -0.2
ITSN1-229ENST00000487427 CSRNP2Q9H175 543 aa13.8□□□□□ -0.2
ITSN1-229ENST00000487427 NRDE2Q9H7Z3 1164 aa13.8□□□□□ -0.2
ITSN1-229ENST00000487427 RSAD1Q9HA92 442 aa13.8□□□□□ -0.2
ITSN1-229ENST00000487427 GPRC5CQ9NQ84 441 aa13.8□□□□□ -0.2
ITSN1-229ENST00000487427 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.8□□□□□ -0.2
ITSN1-229ENST00000487427 CD207Q9UJ71 328 aa13.8□□□□□ -0.2
ITSN1-229ENST00000487427 A0A1B0GUA9 196 aa13.79□□□□□ -0.2
ITSN1-229ENST00000487427 LRRIQ4A6NIV6 560 aa13.79□□□□□ -0.2
ITSN1-229ENST00000487427 PER2O15055 1255 aa13.79□□□□□ -0.2
ITSN1-229ENST00000487427 ZC3H11AO75152 810 aaKnown RBP eCLIP13.79□□□□□ -0.2
ITSN1-229ENST00000487427 TBX10O75333 385 aa13.79□□□□□ -0.2
ITSN1-229ENST00000487427 EYA4O95677 639 aa13.79□□□□□ -0.2
ITSN1-229ENST00000487427 GALTP07902 379 aa13.79□□□□□ -0.2
ITSN1-229ENST00000487427 ITGA4P13612 1032 aa13.79□□□□□ -0.2
ITSN1-229ENST00000487427 ARF4P18085 180 aaPredicted RBP13.79□□□□□ -0.2
ITSN1-229ENST00000487427 BMS1Q14692 1282 aaKnown RBP13.79□□□□□ -0.2
ITSN1-229ENST00000487427 ECM1Q16610 540 aa13.79□□□□□ -0.2
ITSN1-229ENST00000487427 DUSP6Q16828 381 aa13.79□□□□□ -0.2
ITSN1-229ENST00000487427 KRT79Q5XKE5 535 aa13.79□□□□□ -0.2
ITSN1-229ENST00000487427 LARP1BQ659C4 914 aaKnown RBP13.79□□□□□ -0.2
ITSN1-229ENST00000487427 GJD3Q8N144 294 aa13.79□□□□□ -0.2
ITSN1-229ENST00000487427 MRPL43Q8N983 215 aaKnown RBP13.79□□□□□ -0.2
ITSN1-229ENST00000487427 SMG8Q8ND04 991 aaKnown RBP13.79□□□□□ -0.2
ITSN1-229ENST00000487427 TMEM169Q96HH4 297 aa13.79□□□□□ -0.2
ITSN1-229ENST00000487427 CPB2Q96IY4 423 aa13.79□□□□□ -0.2
ITSN1-229ENST00000487427 MSLNLQ96KJ4 702 aa13.79□□□□□ -0.2
ITSN1-229ENST00000487427 EIF2AQ9BY44 585 aaKnown RBP13.79□□□□□ -0.2
ITSN1-229ENST00000487427 ENTPD7Q9NQZ7 604 aa13.79□□□□□ -0.2
ITSN1-229ENST00000487427 CLEC1BQ9P126 229 aa13.79□□□□□ -0.2
ITSN1-229ENST00000487427 PRKAG3Q9UGI9 489 aa13.79□□□□□ -0.2
ITSN1-229ENST00000487427 KIAA1024Q9UPX6 916 aa13.79□□□□□ -0.2
ITSN1-229ENST00000487427 IPPQ9Y573 584 aa13.79□□□□□ -0.2
ITSN1-229ENST00000487427 FNDC1Q4ZHG4 1894 aaPredicted RBP13.78□□□□□ -0.2
ITSN1-229ENST00000487427 TCF20Q9UGU0 1960 aaKnown RBP13.78□□□□□ -0.2
ITSN1-229ENST00000487427 NT5C1B-RDH14C9J2C7 533 aa13.78□□□□□ -0.2
ITSN1-229ENST00000487427 MBTPS2O43462 519 aa13.78□□□□□ -0.2
ITSN1-229ENST00000487427 ALDH2P05091 517 aa13.78□□□□□ -0.2
ITSN1-229ENST00000487427 AFF1P51825 1210 aaKnown RBP13.78□□□□□ -0.2
ITSN1-229ENST00000487427 COASYQ13057 564 aa13.78□□□□□ -0.2
ITSN1-229ENST00000487427 SMAD4Q13485 552 aaKnown RBP13.78□□□□□ -0.2
ITSN1-229ENST00000487427 PPP2R5AQ15172 486 aa13.78□□□□□ -0.2
ITSN1-229ENST00000487427 SMAD2Q15796 467 aaKnown RBP13.78□□□□□ -0.2
ITSN1-229ENST00000487427 CLUL1Q15846 466 aa13.78□□□□□ -0.2
ITSN1-229ENST00000487427 IL17AQ16552 155 aa13.78□□□□□ -0.2
ITSN1-229ENST00000487427 FAM187BQ17R55 369 aa13.78□□□□□ -0.2
ITSN1-229ENST00000487427 PLPP4Q5VZY2 271 aa13.78□□□□□ -0.2
ITSN1-229ENST00000487427 CDCA2Q69YH5 1023 aaPredicted RBP13.78□□□□□ -0.2
ITSN1-229ENST00000487427 POTEHQ6S545 545 aa13.78□□□□□ -0.2
ITSN1-229ENST00000487427 DDX53Q86TM3 631 aaKnown RBP13.78□□□□□ -0.2
ITSN1-229ENST00000487427 ZNF280BQ86YH2 543 aa13.78□□□□□ -0.2
ITSN1-229ENST00000487427 ZBTB8OSQ8IWT0 167 aa13.78□□□□□ -0.2
ITSN1-229ENST00000487427 HACE1Q8IYU2 909 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms