RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 BHMG1C9JSJ3 638 aaPredicted RBP19.47■□□□□ 0.71
PDLIM7-207ENST00000486828 KRIT1O00522 736 aa19.47■□□□□ 0.71
PDLIM7-207ENST00000486828 VWA5AO00534 786 aa19.47■□□□□ 0.71
PDLIM7-207ENST00000486828 GRIN3BO60391 1043 aa19.47■□□□□ 0.71
PDLIM7-207ENST00000486828 RPS12P25398 132 aaKnown RBP19.47■□□□□ 0.71
PDLIM7-207ENST00000486828 GCLMP48507 274 aa19.47■□□□□ 0.71
PDLIM7-207ENST00000486828 MCCD1P59942 119 aaPredicted RBP19.47■□□□□ 0.71
PDLIM7-207ENST00000486828 XKR9Q5GH70 373 aa19.47■□□□□ 0.71
PDLIM7-207ENST00000486828 ARHGEF16Q5VV41 709 aa19.47■□□□□ 0.71
PDLIM7-207ENST00000486828 PLEKHO2Q8TD55 490 aa19.47■□□□□ 0.71
PDLIM7-207ENST00000486828 SEPT11Q9NVA2 429 aaKnown RBP19.47■□□□□ 0.71
PDLIM7-207ENST00000486828 TAS2R14Q9NYV8 317 aa19.47■□□□□ 0.71
PDLIM7-207ENST00000486828 TTC7AQ9ULT0 858 aaPredicted RBP19.47■□□□□ 0.71
PDLIM7-207ENST00000486828 USP20Q9Y2K6 914 aa19.47■□□□□ 0.71
PDLIM7-207ENST00000486828 DIS3Q9Y2L1 958 aaKnown RBP19.47■□□□□ 0.71
PDLIM7-207ENST00000486828 SART1O43290 800 aaKnown RBP19.46■□□□□ 0.71
PDLIM7-207ENST00000486828 SHOX2O60902 331 aaPredicted RBP19.46■□□□□ 0.71
PDLIM7-207ENST00000486828 ERVK-9P63128 1117 aa19.46■□□□□ 0.71
PDLIM7-207ENST00000486828 CUL1Q13616 776 aa19.46■□□□□ 0.71
PDLIM7-207ENST00000486828 TRADDQ15628 312 aa19.46■□□□□ 0.71
PDLIM7-207ENST00000486828 CFAP58Q5T655 872 aa19.46■□□□□ 0.71
PDLIM7-207ENST00000486828 XRRA1Q6P2D8 792 aa19.46■□□□□ 0.71
PDLIM7-207ENST00000486828 LRRC31Q6UY01 552 aa19.46■□□□□ 0.71
PDLIM7-207ENST00000486828 NSMFQ6X4W1 530 aa19.46■□□□□ 0.71
PDLIM7-207ENST00000486828 PALB2Q86YC2 1186 aa19.46■□□□□ 0.71
PDLIM7-207ENST00000486828 IQCKQ8N0W5 287 aa19.46■□□□□ 0.71
PDLIM7-207ENST00000486828 ZSWIM2Q8NEG5 633 aa19.46■□□□□ 0.71
PDLIM7-207ENST00000486828 RDM1Q8NG50 284 aa19.46■□□□□ 0.71
PDLIM7-207ENST00000486828 ARHGEF26Q96DR7 871 aa19.46■□□□□ 0.71
PDLIM7-207ENST00000486828 THAP2Q9H0W7 228 aa19.46■□□□□ 0.71
PDLIM7-207ENST00000486828 EXOC7Q9UPT5 735 aa19.46■□□□□ 0.71
PDLIM7-207ENST00000486828 TESPA1A2RU30 521 aaPredicted RBP19.45■□□□□ 0.7
PDLIM7-207ENST00000486828 DDX3YO15523 660 aaKnown RBP19.45■□□□□ 0.7
PDLIM7-207ENST00000486828 GUCY2FP51841 1108 aa19.45■□□□□ 0.7
PDLIM7-207ENST00000486828 FAM102BQ5T8I3 360 aa19.45■□□□□ 0.7
PDLIM7-207ENST00000486828 PLA2G4FQ68DD2 849 aa19.45■□□□□ 0.7
PDLIM7-207ENST00000486828 SLC20A1Q8WUM9 679 aa19.45■□□□□ 0.7
PDLIM7-207ENST00000486828 HVCN1Q96D96 273 aa19.45■□□□□ 0.7
PDLIM7-207ENST00000486828 SLITRK6Q9H5Y7 841 aa19.45■□□□□ 0.7
PDLIM7-207ENST00000486828 DCAF8L1A6NGE4 600 aa19.45■□□□□ 0.7
PDLIM7-207ENST00000486828 MXI1P50539 228 aa19.45■□□□□ 0.7
PDLIM7-207ENST00000486828 HADHBP55084 474 aaKnown RBP19.45■□□□□ 0.7
PDLIM7-207ENST00000486828 TTMPQ5BVD1 217 aa19.45■□□□□ 0.7
PDLIM7-207ENST00000486828 RHOT2Q8IXI1 618 aa19.45■□□□□ 0.7
PDLIM7-207ENST00000486828 ATG4CQ96DT6 458 aa19.45■□□□□ 0.7
PDLIM7-207ENST00000486828 SENP7Q9BQF6 1050 aa19.45■□□□□ 0.7
PDLIM7-207ENST00000486828 TMEM117Q9H0C3 514 aa19.45■□□□□ 0.7
PDLIM7-207ENST00000486828 RNF146Q9NTX7 359 aa19.45■□□□□ 0.7
PDLIM7-207ENST00000486828 PARP14Q460N5 1801 aa19.44■□□□□ 0.7
PDLIM7-207ENST00000486828 SBF1O95248 1867 aa19.44■□□□□ 0.7
PDLIM7-207ENST00000486828 ADRB2P07550 413 aa19.44■□□□□ 0.7
PDLIM7-207ENST00000486828 CCND2P30279 289 aa19.44■□□□□ 0.7
PDLIM7-207ENST00000486828 HSPA9P38646 679 aaKnown RBP19.44■□□□□ 0.7
PDLIM7-207ENST00000486828 ZNF746Q6NUN9 644 aaPredicted RBP19.44■□□□□ 0.7
PDLIM7-207ENST00000486828 MAP4K3Q8IVH8 894 aa19.44■□□□□ 0.7
PDLIM7-207ENST00000486828 CD302Q8IX05 232 aa19.44■□□□□ 0.7
PDLIM7-207ENST00000486828 TMEM161BQ8NDZ6 487 aa19.44■□□□□ 0.7
PDLIM7-207ENST00000486828 PIK3R5Q8WYR1 880 aa19.44■□□□□ 0.7
PDLIM7-207ENST00000486828 ARL8AQ96BM9 186 aa19.44■□□□□ 0.7
PDLIM7-207ENST00000486828 GPRASP2Q96D09 838 aa19.44■□□□□ 0.7
PDLIM7-207ENST00000486828 MOV10L1Q9BXT6 1211 aaKnown RBP19.44■□□□□ 0.7
PDLIM7-207ENST00000486828 DDX47Q9H0S4 455 aaKnown RBP19.44■□□□□ 0.7
PDLIM7-207ENST00000486828 TBX20Q9UMR3 447 aa19.44■□□□□ 0.7
PDLIM7-207ENST00000486828 DOCK1Q14185 1865 aa19.44■□□□□ 0.7
PDLIM7-207ENST00000486828 FZD9O00144 591 aa19.43■□□□□ 0.7
PDLIM7-207ENST00000486828 ITGA4P13612 1032 aa19.43■□□□□ 0.7
PDLIM7-207ENST00000486828 ECHS1P30084 290 aa19.43■□□□□ 0.7
PDLIM7-207ENST00000486828 SMTNP53814 917 aa19.43■□□□□ 0.7
PDLIM7-207ENST00000486828 BAATQ14032 418 aaPredicted RBP19.43■□□□□ 0.7
PDLIM7-207ENST00000486828 TCEAL1Q15170 157 aa19.43■□□□□ 0.7
PDLIM7-207ENST00000486828 ANO5Q75V66 913 aa19.43■□□□□ 0.7
PDLIM7-207ENST00000486828 TRMT1LQ7Z2T5 733 aaKnown RBP19.43■□□□□ 0.7
PDLIM7-207ENST00000486828 VSIG10LQ86VR7 867 aa19.43■□□□□ 0.7
PDLIM7-207ENST00000486828 WNK4Q96J92 1243 aa19.43■□□□□ 0.7
PDLIM7-207ENST00000486828 HACL1Q9UJ83 578 aa19.43■□□□□ 0.7
PDLIM7-207ENST00000486828 COG5Q9UP83 839 aa19.43■□□□□ 0.7
PDLIM7-207ENST00000486828 RIPK3Q9Y572 518 aa19.43■□□□□ 0.7
PDLIM7-207ENST00000486828 GOLGA8IPA6NC78 632 aa19.43■□□□□ 0.7
PDLIM7-207ENST00000486828 GOLGA8JA6NMD2 632 aa19.43■□□□□ 0.7
PDLIM7-207ENST00000486828 ANKRD63C9JTQ0 380 aa19.43■□□□□ 0.7
PDLIM7-207ENST00000486828 ADSSP30520 456 aa19.43■□□□□ 0.7
PDLIM7-207ENST00000486828 NPTX2P47972 431 aa19.43■□□□□ 0.7
PDLIM7-207ENST00000486828 BACE1P56817 501 aa19.43■□□□□ 0.7
PDLIM7-207ENST00000486828 HLTFQ14527 1009 aaKnown RBP eCLIP19.43■□□□□ 0.7
PDLIM7-207ENST00000486828 NLRX1Q86UT6 975 aa19.43■□□□□ 0.7
PDLIM7-207ENST00000486828 RPUSD2Q8IZ73 545 aaKnown RBP19.43■□□□□ 0.7
PDLIM7-207ENST00000486828 CCDC26Q8TAB7 109 aa19.43■□□□□ 0.7
PDLIM7-207ENST00000486828 CARD9Q9H257 536 aa19.43■□□□□ 0.7
PDLIM7-207ENST00000486828 PCDHA10Q9Y5I2 948 aa19.43■□□□□ 0.7
PDLIM7-207ENST00000486828 PFASO15067 1338 aa19.42■□□□□ 0.7
PDLIM7-207ENST00000486828 CCDC169A6NNP5 214 aa19.42■□□□□ 0.7
PDLIM7-207ENST00000486828 MAFGO15525 162 aa19.42■□□□□ 0.7
PDLIM7-207ENST00000486828 NR3C2P08235 984 aa19.42■□□□□ 0.7
PDLIM7-207ENST00000486828 DMP1Q13316 513 aaPredicted RBP19.42■□□□□ 0.7
PDLIM7-207ENST00000486828 SNRNP35Q16560 246 aaKnown RBP19.42■□□□□ 0.7
PDLIM7-207ENST00000486828 NBPF12Q5TAG4 269 aaPredicted RBP19.42■□□□□ 0.7
PDLIM7-207ENST00000486828 DCAF12L1Q5VU92 463 aa19.42■□□□□ 0.7
PDLIM7-207ENST00000486828 MAATS1Q7Z4T9 603 aa19.42■□□□□ 0.7
PDLIM7-207ENST00000486828 CBWD2Q8IUF1 395 aa19.42■□□□□ 0.7
PDLIM7-207ENST00000486828 MICALL2Q8IY33 904 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms