RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 LMBR1LQ6UX01 489 aa7.33□□□□□ -1.24
LTN1-206ENST00000486427 CMTM4Q8IZR5 234 aa7.33□□□□□ -1.24
LTN1-206ENST00000486427 SH3RF3Q8TEJ3 882 aaPredicted RBP7.33□□□□□ -1.24
LTN1-206ENST00000486427 AHCYL2Q96HN2 611 aaKnown RBP7.33□□□□□ -1.24
LTN1-206ENST00000486427 TLR9Q9NR96 1032 aa7.33□□□□□ -1.24
LTN1-206ENST00000486427 TESMINQ9Y4I5 508 aa7.33□□□□□ -1.24
LTN1-206ENST00000486427 TMEM127O75204 238 aa7.32□□□□□ -1.24
LTN1-206ENST00000486427 CFBP00751 764 aa7.32□□□□□ -1.24
LTN1-206ENST00000486427 NRG3P56975 720 aa7.32□□□□□ -1.24
LTN1-206ENST00000486427 PUM1Q14671 1186 aaKnown RBP eCLIP7.32□□□□□ -1.24
LTN1-206ENST00000486427 ZXDCQ2QGD7 858 aaPredicted RBP7.32□□□□□ -1.24
LTN1-206ENST00000486427 TAS1R1Q7RTX1 841 aa7.32□□□□□ -1.24
LTN1-206ENST00000486427 GLB1L2Q8IW92 636 aa7.32□□□□□ -1.24
LTN1-206ENST00000486427 FAM89AQ96GI7 184 aa7.32□□□□□ -1.24
LTN1-206ENST00000486427 ORAI2Q96SN7 254 aa7.32□□□□□ -1.24
LTN1-206ENST00000486427 TCF25Q9BQ70 676 aa7.32□□□□□ -1.24
LTN1-206ENST00000486427 QRSL1Q9H0R6 528 aaKnown RBP7.32□□□□□ -1.24
LTN1-206ENST00000486427 DPP7Q9UHL4 492 aa7.32□□□□□ -1.24
LTN1-206ENST00000486427 PLSCR1O15162 318 aa7.31□□□□□ -1.24
LTN1-206ENST00000486427 STC2O76061 302 aa7.31□□□□□ -1.24
LTN1-206ENST00000486427 ERVK-21P61565 698 aa7.31□□□□□ -1.24
LTN1-206ENST00000486427 SPIDRQ14159 915 aa7.31□□□□□ -1.24
LTN1-206ENST00000486427 UBE3CQ15386 1083 aa7.31□□□□□ -1.24
LTN1-206ENST00000486427 ABHD15Q6UXT9 468 aa7.31□□□□□ -1.24
LTN1-206ENST00000486427 SGMS1Q86VZ5 419 aa7.31□□□□□ -1.24
LTN1-206ENST00000486427 TSPEARQ8WU66 669 aa7.31□□□□□ -1.24
LTN1-206ENST00000486427 ENKD1Q9H0I2 346 aa7.31□□□□□ -1.24
LTN1-206ENST00000486427 MCM8Q9UJA3 840 aa7.31□□□□□ -1.24
LTN1-206ENST00000486427 MYRFQ9Y2G1 1151 aa7.31□□□□□ -1.24
LTN1-206ENST00000486427 ATP8A1Q9Y2Q0 1164 aa7.31□□□□□ -1.24
LTN1-206ENST00000486427 CAPN14A8MX76 684 aa7.3□□□□□ -1.24
LTN1-206ENST00000486427 MATN3O15232 486 aa7.3□□□□□ -1.24
LTN1-206ENST00000486427 CASRP41180 1078 aa7.3□□□□□ -1.24
LTN1-206ENST00000486427 GPR3P46089 330 aa7.3□□□□□ -1.24
LTN1-206ENST00000486427 CCT2P78371 535 aaKnown RBP7.3□□□□□ -1.24
LTN1-206ENST00000486427 CDK17Q00537 523 aa7.3□□□□□ -1.24
LTN1-206ENST00000486427 AMPD3Q01432 767 aa7.3□□□□□ -1.24
LTN1-206ENST00000486427 DBX2Q6ZNG2 339 aa7.3□□□□□ -1.24
LTN1-206ENST00000486427 KCNK18Q7Z418 384 aa7.3□□□□□ -1.24
LTN1-206ENST00000486427 RAX2Q96IS3 184 aa7.3□□□□□ -1.24
LTN1-206ENST00000486427 MPHOSPH9Q99550 1183 aa7.3□□□□□ -1.24
LTN1-206ENST00000486427 TRIM8Q9BZR9 551 aa7.3□□□□□ -1.24
LTN1-206ENST00000486427 LTA4HP09960 611 aaKnown RBP7.29□□□□□ -1.24
LTN1-206ENST00000486427 TNFRSF1AP19438 455 aa7.29□□□□□ -1.24
LTN1-206ENST00000486427 HIBADHP31937 336 aaKnown RBP7.29□□□□□ -1.24
LTN1-206ENST00000486427 CDKN1CP49918 316 aaPredicted RBP7.29□□□□□ -1.24
LTN1-206ENST00000486427 NPEPPSP55786 919 aa7.29□□□□□ -1.24
LTN1-206ENST00000486427 SRSF2Q01130 221 aaKnown RBP7.29□□□□□ -1.24
LTN1-206ENST00000486427 HHEXQ03014 270 aa7.29□□□□□ -1.24
LTN1-206ENST00000486427 FAPQ12884 760 aa7.29□□□□□ -1.24
LTN1-206ENST00000486427 FAM214AQ32MH5 1076 aa7.29□□□□□ -1.24
LTN1-206ENST00000486427 TOR2AQ5JU69 321 aa7.29□□□□□ -1.24
LTN1-206ENST00000486427 FKBP15Q5T1M5 1219 aa7.29□□□□□ -1.24
LTN1-206ENST00000486427 EXTL1Q92935 676 aa7.29□□□□□ -1.24
LTN1-206ENST00000486427 ZNF512Q96ME7 567 aaPredicted RBP7.29□□□□□ -1.24
LTN1-206ENST00000486427 K7ESF4 209 aa7.28□□□□□ -1.24
LTN1-206ENST00000486427 PRAMEF4O60810 478 aa7.28□□□□□ -1.24
LTN1-206ENST00000486427 CTSSP25774 331 aa7.28□□□□□ -1.24
LTN1-206ENST00000486427 MRPS9P82933 396 aaKnown RBP7.28□□□□□ -1.24
LTN1-206ENST00000486427 ELAVL1Q15717 326 aaKnown RBP7.28□□□□□ -1.24
LTN1-206ENST00000486427 MUM1Q2TAK8 710 aa7.28□□□□□ -1.24
LTN1-206ENST00000486427 USP39Q53GS9 565 aaKnown RBP7.28□□□□□ -1.24
LTN1-206ENST00000486427 ELOA2Q8IYF1 753 aaPredicted RBP7.28□□□□□ -1.24
LTN1-206ENST00000486427 LILRA3Q8N6C8 439 aaPredicted RBP7.28□□□□□ -1.24
LTN1-206ENST00000486427 CNTD1Q8N815 330 aa7.28□□□□□ -1.24
LTN1-206ENST00000486427 AUTS2Q8WXX7 1259 aa7.28□□□□□ -1.24
LTN1-206ENST00000486427 ARL8AQ96BM9 186 aa7.28□□□□□ -1.24
LTN1-206ENST00000486427 BORCS6Q96GS4 357 aa7.28□□□□□ -1.24
LTN1-206ENST00000486427 CCM2LQ9NUG4 571 aaPredicted RBP7.28□□□□□ -1.24
LTN1-206ENST00000486427 SLC5A4Q9NY91 659 aa7.28□□□□□ -1.24
LTN1-206ENST00000486427 ACRV1P26436 265 aa7.27□□□□□ -1.25
LTN1-206ENST00000486427 Q6ZRM9 215 aa7.27□□□□□ -1.25
LTN1-206ENST00000486427 OR5M3Q8NGP4 307 aa7.27□□□□□ -1.25
LTN1-206ENST00000486427 SNX33Q8WV41 574 aa7.27□□□□□ -1.25
LTN1-206ENST00000486427 NRP1O14786 923 aa7.26□□□□□ -1.25
LTN1-206ENST00000486427 CDK11BP21127 795 aaKnown RBP7.26□□□□□ -1.25
LTN1-206ENST00000486427 CANXP27824 592 aaKnown RBP7.26□□□□□ -1.25
LTN1-206ENST00000486427 SCNN1GP51170 649 aa7.26□□□□□ -1.25
LTN1-206ENST00000486427 WNT3AP56704 352 aa7.26□□□□□ -1.25
LTN1-206ENST00000486427 MEF2AQ02078 507 aaPredicted RBP7.26□□□□□ -1.25
LTN1-206ENST00000486427 DUSP2Q05923 314 aa7.26□□□□□ -1.25
LTN1-206ENST00000486427 NRN1LQ496H8 165 aa7.26□□□□□ -1.25
LTN1-206ENST00000486427 RNF207Q6ZRF8 634 aa7.26□□□□□ -1.25
LTN1-206ENST00000486427 GLB1L3Q8NCI6 653 aaPredicted RBP7.26□□□□□ -1.25
LTN1-206ENST00000486427 IL17DQ8TAD2 202 aa7.26□□□□□ -1.25
LTN1-206ENST00000486427 MIEF2Q96C03 454 aa7.26□□□□□ -1.25
LTN1-206ENST00000486427 IFT122Q9HBG6 1241 aa7.26□□□□□ -1.25
LTN1-206ENST00000486427 DNAJC28Q9NX36 388 aa7.26□□□□□ -1.25
LTN1-206ENST00000486427 GIT1Q9Y2X7 761 aa7.26□□□□□ -1.25
LTN1-206ENST00000486427 HOXA3O43365 443 aaPredicted RBP7.25□□□□□ -1.25
LTN1-206ENST00000486427 MTNR1BP49286 362 aa7.25□□□□□ -1.25
LTN1-206ENST00000486427 EVA1CP58658 441 aa7.25□□□□□ -1.25
LTN1-206ENST00000486427 KLF1Q13351 362 aaPredicted RBP7.25□□□□□ -1.25
LTN1-206ENST00000486427 ADRM1Q16186 407 aa7.25□□□□□ -1.25
LTN1-206ENST00000486427 C19orf54Q5BKX5 351 aa7.25□□□□□ -1.25
LTN1-206ENST00000486427 C1QL3Q5VWW1 255 aa7.25□□□□□ -1.25
LTN1-206ENST00000486427 NECAB2Q7Z6G3 386 aa7.25□□□□□ -1.25
LTN1-206ENST00000486427 ANKRD35Q8N283 1001 aa7.25□□□□□ -1.25
LTN1-206ENST00000486427 CBARPQ8N350 705 aaPredicted RBP7.25□□□□□ -1.25
LTN1-206ENST00000486427 PUS7LQ9H0K6 701 aaKnown RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms