RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 CDCA3Q99618 268 aaPredicted RBP20.43■□□□□ 0.86
PRPF40A-209ENST00000486100 GPRC5CQ9NQ84 441 aa20.43■□□□□ 0.86
PRPF40A-209ENST00000486100 TBC1D13Q9NVG8 400 aa20.43■□□□□ 0.86
PRPF40A-209ENST00000486100 INPP5FQ9Y2H2 1132 aa20.43■□□□□ 0.86
PRPF40A-209ENST00000486100 KIAA1671Q9BY89 1806 aa20.42■□□□□ 0.86
PRPF40A-209ENST00000486100 ARHGEF35A5YM69 484 aa20.42■□□□□ 0.86
PRPF40A-209ENST00000486100 NT5C1B-RDH14C9J2C7 533 aa20.42■□□□□ 0.86
PRPF40A-209ENST00000486100 PER2O15055 1255 aa20.42■□□□□ 0.86
PRPF40A-209ENST00000486100 CYP11B2P19099 503 aa20.42■□□□□ 0.86
PRPF40A-209ENST00000486100 ECM1Q16610 540 aa20.42■□□□□ 0.86
PRPF40A-209ENST00000486100 AMHR2Q16671 573 aa20.42■□□□□ 0.86
PRPF40A-209ENST00000486100 RILPL1Q5EBL4 403 aa20.42■□□□□ 0.86
PRPF40A-209ENST00000486100 PADI6Q6TGC4 694 aa20.42■□□□□ 0.86
PRPF40A-209ENST00000486100 TMC7Q7Z402 723 aa20.42■□□□□ 0.86
PRPF40A-209ENST00000486100 IGSF22Q8N9C0 903 aa20.42■□□□□ 0.86
PRPF40A-209ENST00000486100 SMG8Q8ND04 991 aaKnown RBP20.42■□□□□ 0.86
PRPF40A-209ENST00000486100 MSLNLQ96KJ4 702 aa20.42■□□□□ 0.86
PRPF40A-209ENST00000486100 TCF25Q9BQ70 676 aa20.42■□□□□ 0.86
PRPF40A-209ENST00000486100 RAB34Q9BZG1 259 aa20.42■□□□□ 0.86
PRPF40A-209ENST00000486100 CSRNP2Q9H175 543 aa20.42■□□□□ 0.86
PRPF40A-209ENST00000486100 NRDE2Q9H7Z3 1164 aa20.42■□□□□ 0.86
PRPF40A-209ENST00000486100 RSAD1Q9HA92 442 aa20.42■□□□□ 0.86
PRPF40A-209ENST00000486100 CD320Q9NPF0 282 aa20.42■□□□□ 0.86
PRPF40A-209ENST00000486100 UBN1Q9NPG3 1134 aa20.42■□□□□ 0.86
PRPF40A-209ENST00000486100 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.42■□□□□ 0.86
PRPF40A-209ENST00000486100 CLEC1BQ9P126 229 aa20.42■□□□□ 0.86
PRPF40A-209ENST00000486100 KANSL3Q9P2N6 904 aa20.42■□□□□ 0.86
PRPF40A-209ENST00000486100 CD207Q9UJ71 328 aa20.42■□□□□ 0.86
PRPF40A-209ENST00000486100 SMC3Q9UQE7 1217 aa20.42■□□□□ 0.86
PRPF40A-209ENST00000486100 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.42■□□□□ 0.86
PRPF40A-209ENST00000486100 CNTNAP2Q9UHC6 1331 aa20.42■□□□□ 0.86
PRPF40A-209ENST00000486100 FSD2A1L4K1 749 aa20.41■□□□□ 0.86
PRPF40A-209ENST00000486100 H3BQV1 296 aa20.41■□□□□ 0.86
PRPF40A-209ENST00000486100 MBTPS2O43462 519 aa20.41■□□□□ 0.86
PRPF40A-209ENST00000486100 ZC3H11AO75152 810 aaKnown RBP eCLIP20.41■□□□□ 0.86
PRPF40A-209ENST00000486100 GALTP07902 379 aa20.41■□□□□ 0.86
PRPF40A-209ENST00000486100 PRPHP41219 470 aa20.41■□□□□ 0.86
PRPF40A-209ENST00000486100 RNASELQ05823 741 aaKnown RBP20.41■□□□□ 0.86
PRPF40A-209ENST00000486100 CLUL1Q15846 466 aa20.41■□□□□ 0.86
PRPF40A-209ENST00000486100 DUSP6Q16828 381 aa20.41■□□□□ 0.86
PRPF40A-209ENST00000486100 PLPP4Q5VZY2 271 aa20.41■□□□□ 0.86
PRPF40A-209ENST00000486100 GJD3Q8N144 294 aa20.41■□□□□ 0.86
PRPF40A-209ENST00000486100 URGCPQ8TCY9 931 aa20.41■□□□□ 0.86
PRPF40A-209ENST00000486100 CPB2Q96IY4 423 aa20.41■□□□□ 0.86
PRPF40A-209ENST00000486100 EIF2AQ9BY44 585 aaKnown RBP20.41■□□□□ 0.86
PRPF40A-209ENST00000486100 ENTPD7Q9NQZ7 604 aa20.41■□□□□ 0.86
PRPF40A-209ENST00000486100 PRKAG3Q9UGI9 489 aa20.41■□□□□ 0.86
PRPF40A-209ENST00000486100 LRRIQ4A6NIV6 560 aa20.4■□□□□ 0.86
PRPF40A-209ENST00000486100 EYA4O95677 639 aa20.4■□□□□ 0.86
PRPF40A-209ENST00000486100 ITGA4P13612 1032 aa20.4■□□□□ 0.86
PRPF40A-209ENST00000486100 ARF4P18085 180 aaPredicted RBP20.4■□□□□ 0.86
PRPF40A-209ENST00000486100 SMAD4Q13485 552 aaKnown RBP20.4■□□□□ 0.86
PRPF40A-209ENST00000486100 SMAD2Q15796 467 aaKnown RBP20.4■□□□□ 0.86
PRPF40A-209ENST00000486100 DTHD1Q6ZMT9 781 aa20.4■□□□□ 0.86
PRPF40A-209ENST00000486100 ZNF280BQ86YH2 543 aa20.4■□□□□ 0.86
PRPF40A-209ENST00000486100 TMEM169Q96HH4 297 aa20.4■□□□□ 0.86
PRPF40A-209ENST00000486100 KIAA1024Q9UPX6 916 aa20.4■□□□□ 0.86
PRPF40A-209ENST00000486100 IPPQ9Y573 584 aa20.4■□□□□ 0.86
PRPF40A-209ENST00000486100 HIDE1A8MVS5 230 aa20.39■□□□□ 0.85
PRPF40A-209ENST00000486100 GLP2RO95838 553 aa20.39■□□□□ 0.85
PRPF40A-209ENST00000486100 AFF1P51825 1210 aaKnown RBP20.39■□□□□ 0.85
PRPF40A-209ENST00000486100 COASYQ13057 564 aa20.39■□□□□ 0.85
PRPF40A-209ENST00000486100 BMS1Q14692 1282 aaKnown RBP20.39■□□□□ 0.85
PRPF40A-209ENST00000486100 IL17AQ16552 155 aa20.39■□□□□ 0.85
PRPF40A-209ENST00000486100 KRT79Q5XKE5 535 aa20.39■□□□□ 0.85
PRPF40A-209ENST00000486100 CDCA2Q69YH5 1023 aaPredicted RBP20.39■□□□□ 0.85
PRPF40A-209ENST00000486100 MRPL43Q8N983 215 aaKnown RBP20.39■□□□□ 0.85
PRPF40A-209ENST00000486100 SNX29Q8TEQ0 813 aa20.39■□□□□ 0.85
PRPF40A-209ENST00000486100 IGSF21Q96ID5 467 aa20.39■□□□□ 0.85
PRPF40A-209ENST00000486100 GBP3Q9H0R5 595 aa20.39■□□□□ 0.85
PRPF40A-209ENST00000486100 BHMT2Q9H2M3 363 aa20.39■□□□□ 0.85
PRPF40A-209ENST00000486100 RNF39Q9H2S5 420 aa20.39■□□□□ 0.85
PRPF40A-209ENST00000486100 A0A1B0GUA9 196 aa20.38■□□□□ 0.85
PRPF40A-209ENST00000486100 B4GALT5O43286 388 aa20.38■□□□□ 0.85
PRPF40A-209ENST00000486100 DDHD2O94830 711 aa20.38■□□□□ 0.85
PRPF40A-209ENST00000486100 ALDH2P05091 517 aa20.38■□□□□ 0.85
PRPF40A-209ENST00000486100 SSTR3P32745 418 aaPredicted RBP20.38■□□□□ 0.85
PRPF40A-209ENST00000486100 SMC1AQ14683 1233 aaKnown RBP20.38■□□□□ 0.85
PRPF40A-209ENST00000486100 LARP1BQ659C4 914 aaKnown RBP20.38■□□□□ 0.85
PRPF40A-209ENST00000486100 TMEM184AQ6ZMB5 413 aa20.38■□□□□ 0.85
PRPF40A-209ENST00000486100 PPP4R3CPQ6ZMV5 832 aa20.38■□□□□ 0.85
PRPF40A-209ENST00000486100 DDX53Q86TM3 631 aaKnown RBP20.38■□□□□ 0.85
PRPF40A-209ENST00000486100 TMEM173Q86WV6 379 aaPredicted RBP20.38■□□□□ 0.85
PRPF40A-209ENST00000486100 ZBTB8OSQ8IWT0 167 aa20.38■□□□□ 0.85
PRPF40A-209ENST00000486100 ADHFE1Q8IWW8 467 aa20.38■□□□□ 0.85
PRPF40A-209ENST00000486100 PRIMPOLQ96LW4 560 aa20.38■□□□□ 0.85
PRPF40A-209ENST00000486100 FAM193BQ96PV7 902 aaPredicted RBP20.38■□□□□ 0.85
PRPF40A-209ENST00000486100 TRIM6Q9C030 488 aaPredicted RBP20.38■□□□□ 0.85
PRPF40A-209ENST00000486100 C2orf40Q9H1Z8 148 aa20.38■□□□□ 0.85
PRPF40A-209ENST00000486100 FZD8Q9H461 694 aa20.38■□□□□ 0.85
PRPF40A-209ENST00000486100 DDX19AQ9NUU7 478 aaKnown RBP20.38■□□□□ 0.85
PRPF40A-209ENST00000486100 PRMT7Q9NVM4 692 aaPredicted RBP20.38■□□□□ 0.85
PRPF40A-209ENST00000486100 DNAJB4Q9UDY4 337 aa20.38■□□□□ 0.85
PRPF40A-209ENST00000486100 BARX2Q9UMQ3 279 aaPredicted RBP20.38■□□□□ 0.85
PRPF40A-209ENST00000486100 PLXNA4Q9HCM2 1894 aa20.37■□□□□ 0.85
PRPF40A-209ENST00000486100 INPPL1O15357 1258 aa20.37■□□□□ 0.85
PRPF40A-209ENST00000486100 CXCL14O95715 111 aa20.37■□□□□ 0.85
PRPF40A-209ENST00000486100 POMCP01189 267 aa20.37■□□□□ 0.85
PRPF40A-209ENST00000486100 SLC11A1P49279 550 aa20.37■□□□□ 0.85
PRPF40A-209ENST00000486100 ATP2C1P98194 919 aaPredicted RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms