RNA–Protein interactions for RNA: ENST00000485955.1

VPS41-213, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-213ENST00000485955 CEP72Q9P209 647 aa5.57□□□□□ -1.52
VPS41-213ENST00000485955 KCNG1Q9UIX4 513 aa5.57□□□□□ -1.52
VPS41-213ENST00000485955 EDARQ9UNE0 448 aa5.57□□□□□ -1.52
VPS41-213ENST00000485955 FZD7O75084 574 aa5.56□□□□□ -1.52
VPS41-213ENST00000485955 CASRP41180 1078 aa5.56□□□□□ -1.52
VPS41-213ENST00000485955 GPR15P49685 360 aa5.56□□□□□ -1.52
VPS41-213ENST00000485955 RABGGTBP53611 331 aa5.56□□□□□ -1.52
VPS41-213ENST00000485955 NPEPPSP55786 919 aa5.56□□□□□ -1.52
VPS41-213ENST00000485955 LGALS4P56470 323 aa5.56□□□□□ -1.52
VPS41-213ENST00000485955 SPIDRQ14159 915 aa5.56□□□□□ -1.52
VPS41-213ENST00000485955 UBE3CQ15386 1083 aa5.56□□□□□ -1.52
VPS41-213ENST00000485955 FAM214AQ32MH5 1076 aa5.56□□□□□ -1.52
VPS41-213ENST00000485955 C1QL3Q5VWW1 255 aa5.56□□□□□ -1.52
VPS41-213ENST00000485955 LHFPL2Q6ZUX7 228 aa5.56□□□□□ -1.52
VPS41-213ENST00000485955 TAS1R1Q7RTX1 841 aa5.56□□□□□ -1.52
VPS41-213ENST00000485955 HDGFL2Q7Z4V5 671 aaPredicted RBP5.56□□□□□ -1.52
VPS41-213ENST00000485955 TMPRSS6Q8IU80 811 aa5.56□□□□□ -1.52
VPS41-213ENST00000485955 GSPT2Q8IYD1 628 aaKnown RBP5.56□□□□□ -1.52
VPS41-213ENST00000485955 ANKRD35Q8N283 1001 aa5.56□□□□□ -1.52
VPS41-213ENST00000485955 AFAP1L2Q8N4X5 818 aa5.56□□□□□ -1.52
VPS41-213ENST00000485955 CSRNP2Q9H175 543 aa5.56□□□□□ -1.52
VPS41-213ENST00000485955 ZNF703Q9H7S9 590 aaPredicted RBP5.56□□□□□ -1.52
VPS41-213ENST00000485955 XDHP47989 1333 aa5.55□□□□□ -1.52
VPS41-213ENST00000485955 HOXA3O43365 443 aaPredicted RBP5.55□□□□□ -1.52
VPS41-213ENST00000485955 NARSO43776 548 aaKnown RBP5.55□□□□□ -1.52
VPS41-213ENST00000485955 EYA4O95677 639 aa5.55□□□□□ -1.52
VPS41-213ENST00000485955 SLPIP03973 132 aa5.55□□□□□ -1.52
VPS41-213ENST00000485955 XPAP23025 273 aaPredicted RBP5.55□□□□□ -1.52
VPS41-213ENST00000485955 PTH1RQ03431 593 aa5.55□□□□□ -1.52
VPS41-213ENST00000485955 LSM12Q3MHD2 195 aaKnown RBP5.55□□□□□ -1.52
VPS41-213ENST00000485955 TAF7LQ5H9L4 462 aa5.55□□□□□ -1.52
VPS41-213ENST00000485955 FNDC7Q5VTL7 733 aa5.55□□□□□ -1.52
VPS41-213ENST00000485955 OR14C36Q8NHC7 312 aa5.55□□□□□ -1.52
VPS41-213ENST00000485955 CHAC2Q8WUX2 184 aa5.55□□□□□ -1.52
VPS41-213ENST00000485955 ARL8AQ96BM9 186 aa5.55□□□□□ -1.52
VPS41-213ENST00000485955 WNT8AQ9H1J5 351 aa5.55□□□□□ -1.52
VPS41-213ENST00000485955 KCTD10Q9H3F6 313 aa5.55□□□□□ -1.52
VPS41-213ENST00000485955 CYP27B1O15528 508 aa5.54□□□□□ -1.52
VPS41-213ENST00000485955 IGSF3O75054 1194 aa5.54□□□□□ -1.52
VPS41-213ENST00000485955 SOX5P35711 763 aa5.54□□□□□ -1.52
VPS41-213ENST00000485955 GDF5P43026 501 aa5.54□□□□□ -1.52
VPS41-213ENST00000485955 PTTG1IPP53801 180 aa5.54□□□□□ -1.52
VPS41-213ENST00000485955 SESN3P58005 492 aa5.54□□□□□ -1.52
VPS41-213ENST00000485955 CRHR2Q13324 411 aa5.54□□□□□ -1.52
VPS41-213ENST00000485955 CCDC178Q5BJE1 867 aa5.54□□□□□ -1.52
VPS41-213ENST00000485955 LMBR1LQ6UX01 489 aa5.54□□□□□ -1.52
VPS41-213ENST00000485955 ABHD15Q6UXT9 468 aa5.54□□□□□ -1.52
VPS41-213ENST00000485955 MB21D1Q8N884 522 aa5.54□□□□□ -1.52
VPS41-213ENST00000485955 MDGA1Q8NFP4 955 aa5.54□□□□□ -1.52
VPS41-213ENST00000485955 OR5M3Q8NGP4 307 aa5.54□□□□□ -1.52
VPS41-213ENST00000485955 RSAD2Q8WXG1 361 aa5.54□□□□□ -1.52
VPS41-213ENST00000485955 PGBD4Q96DM1 585 aa5.54□□□□□ -1.52
VPS41-213ENST00000485955 SORCS2Q96PQ0 1159 aa5.54□□□□□ -1.52
VPS41-213ENST00000485955 GPR87Q9BY21 358 aa5.54□□□□□ -1.52
VPS41-213ENST00000485955 FAM126AQ9BYI3 521 aaPredicted RBP5.54□□□□□ -1.52
VPS41-213ENST00000485955 AURKAIP1Q9NWT8 199 aaPredicted RBP5.54□□□□□ -1.52
VPS41-213ENST00000485955 ING1Q9UK53 422 aaPredicted RBP5.54□□□□□ -1.52
VPS41-213ENST00000485955 CDY2AQ9Y6F7 541 aa5.54□□□□□ -1.52
VPS41-213ENST00000485955 KLRG2A4D1S0 409 aaPredicted RBP5.53□□□□□ -1.52
VPS41-213ENST00000485955 NRP2O60462 931 aa5.53□□□□□ -1.52
VPS41-213ENST00000485955 MFAP3LO75121 409 aa5.53□□□□□ -1.52
VPS41-213ENST00000485955 TMEM127O75204 238 aa5.53□□□□□ -1.52
VPS41-213ENST00000485955 MAN2A2P49641 1150 aa5.53□□□□□ -1.52
VPS41-213ENST00000485955 NRG3P56975 720 aa5.53□□□□□ -1.52
VPS41-213ENST00000485955 SLC25A3Q00325 362 aa5.53□□□□□ -1.52
VPS41-213ENST00000485955 KLF10Q13118 480 aa5.53□□□□□ -1.52
VPS41-213ENST00000485955 CNGB1Q14028 1251 aaPredicted RBP5.53□□□□□ -1.52
VPS41-213ENST00000485955 STAT4Q14765 748 aa5.53□□□□□ -1.52
VPS41-213ENST00000485955 FSCN1Q16658 493 aaKnown RBP5.53□□□□□ -1.52
VPS41-213ENST00000485955 UGT8Q16880 541 aa5.53□□□□□ -1.52
VPS41-213ENST00000485955 EGFLAMQ63HQ2 1017 aa5.53□□□□□ -1.52
VPS41-213ENST00000485955 MFSD5Q6N075 450 aa5.53□□□□□ -1.52
VPS41-213ENST00000485955 TGFBRAP1Q8WUH2 860 aa5.53□□□□□ -1.52
VPS41-213ENST00000485955 ATXN2LQ8WWM7 1075 aaKnown RBP5.53□□□□□ -1.52
VPS41-213ENST00000485955 MNTQ99583 582 aa5.53□□□□□ -1.52
VPS41-213ENST00000485955 APOBEC2Q9Y235 224 aaKnown RBP5.53□□□□□ -1.52
VPS41-213ENST00000485955 BRINP1O60477 761 aa5.52□□□□□ -1.53
VPS41-213ENST00000485955 ULK1O75385 1050 aa5.52□□□□□ -1.53
VPS41-213ENST00000485955 VIL1P09327 827 aaKnown RBP5.52□□□□□ -1.53
VPS41-213ENST00000485955 POU3F3P20264 500 aaPredicted RBP5.52□□□□□ -1.53
VPS41-213ENST00000485955 ENPP1P22413 925 aa5.52□□□□□ -1.53
VPS41-213ENST00000485955 MRPL49Q13405 166 aaKnown RBP5.52□□□□□ -1.53
VPS41-213ENST00000485955 TOB2Q14106 344 aaPredicted RBP5.52□□□□□ -1.53
VPS41-213ENST00000485955 HTR3DQ70Z44 454 aa5.52□□□□□ -1.53
VPS41-213ENST00000485955 GLB1L2Q8IW92 636 aa5.52□□□□□ -1.53
VPS41-213ENST00000485955 LILRA3Q8N6C8 439 aaPredicted RBP5.52□□□□□ -1.53
VPS41-213ENST00000485955 LMBR1Q8WVP7 490 aa5.52□□□□□ -1.53
VPS41-213ENST00000485955 ST8SIA2Q92186 375 aa5.52□□□□□ -1.53
VPS41-213ENST00000485955 PCED1AQ9H1Q7 454 aa5.52□□□□□ -1.53
VPS41-213ENST00000485955 SLC2A4RGQ9NR83 387 aa5.52□□□□□ -1.53
VPS41-213ENST00000485955 DPP7Q9UHL4 492 aa5.52□□□□□ -1.53
VPS41-213ENST00000485955 GOLGA8AA7E2F4 631 aa5.51□□□□□ -1.53
VPS41-213ENST00000485955 NRP1O14786 923 aa5.51□□□□□ -1.53
VPS41-213ENST00000485955 ZNF202O95125 648 aa5.51□□□□□ -1.53
VPS41-213ENST00000485955 LTA4HP09960 611 aaKnown RBP5.51□□□□□ -1.53
VPS41-213ENST00000485955 HK1P19367 917 aa5.51□□□□□ -1.53
VPS41-213ENST00000485955 CTSSP25774 331 aa5.51□□□□□ -1.53
VPS41-213ENST00000485955 SCAND1P57086 179 aa5.51□□□□□ -1.53
VPS41-213ENST00000485955 TMPRSS15P98073 1019 aa5.51□□□□□ -1.53
VPS41-213ENST00000485955 DUSP2Q05923 314 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms