RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 RWDD3Q9Y3V2 267 aa19.63■□□□□ 0.73
SREBF1-213ENST00000485080 CNTNAP2Q9UHC6 1331 aa19.62■□□□□ 0.73
SREBF1-213ENST00000485080 A0A087X0B3 334 aa19.62■□□□□ 0.73
SREBF1-213ENST00000485080 SLC34A2O95436 690 aa19.62■□□□□ 0.73
SREBF1-213ENST00000485080 POU3F3P20264 500 aaPredicted RBP19.62■□□□□ 0.73
SREBF1-213ENST00000485080 ME1P48163 572 aa19.62■□□□□ 0.73
SREBF1-213ENST00000485080 PEX3P56589 373 aa19.62■□□□□ 0.73
SREBF1-213ENST00000485080 BTG3Q14201 252 aaPredicted RBP19.62■□□□□ 0.73
SREBF1-213ENST00000485080 CNNM3Q8NE01 707 aa19.62■□□□□ 0.73
SREBF1-213ENST00000485080 FAM161BQ96MY7 647 aa19.62■□□□□ 0.73
SREBF1-213ENST00000485080 CUEDC2Q9H467 287 aa19.62■□□□□ 0.73
SREBF1-213ENST00000485080 POLD4Q9HCU8 107 aa19.62■□□□□ 0.73
SREBF1-213ENST00000485080 LARSQ9P2J5 1176 aaKnown RBP19.62■□□□□ 0.73
SREBF1-213ENST00000485080 STXBP5LQ9Y2K9 1186 aa19.62■□□□□ 0.73
SREBF1-213ENST00000485080 PCDHB2Q9Y5E7 798 aa19.62■□□□□ 0.73
SREBF1-213ENST00000485080 TCHHQ07283 1943 aa19.61■□□□□ 0.73
SREBF1-213ENST00000485080 FNDC1Q4ZHG4 1894 aaPredicted RBP19.61■□□□□ 0.73
SREBF1-213ENST00000485080 C5orf67F2Z3F1 127 aa19.61■□□□□ 0.73
SREBF1-213ENST00000485080 RB1P06400 928 aa19.61■□□□□ 0.73
SREBF1-213ENST00000485080 GIT2Q14161 759 aa19.61■□□□□ 0.73
SREBF1-213ENST00000485080 E2F4Q16254 413 aa19.61■□□□□ 0.73
SREBF1-213ENST00000485080 RESP18Q5W5W9 173 aa19.61■□□□□ 0.73
SREBF1-213ENST00000485080 SV2BQ7L1I2 683 aa19.61■□□□□ 0.73
SREBF1-213ENST00000485080 PGBD4Q96DM1 585 aa19.61■□□□□ 0.73
SREBF1-213ENST00000485080 REEP2Q9BRK0 252 aa19.61■□□□□ 0.73
SREBF1-213ENST00000485080 KMT5AQ9NQR1 393 aa19.61■□□□□ 0.73
SREBF1-213ENST00000485080 CIZ1Q9ULV3 898 aaPredicted RBP19.61■□□□□ 0.73
SREBF1-213ENST00000485080 MYH11P35749 1972 aa19.61■□□□□ 0.73
SREBF1-213ENST00000485080 K7ERI5 159 aa19.6■□□□□ 0.73
SREBF1-213ENST00000485080 PRKCBP05771 671 aa19.6■□□□□ 0.73
SREBF1-213ENST00000485080 NCLP19338 710 aaKnown RBP19.6■□□□□ 0.73
SREBF1-213ENST00000485080 STAT6P42226 847 aa19.6■□□□□ 0.73
SREBF1-213ENST00000485080 SMTNP53814 917 aa19.6■□□□□ 0.73
SREBF1-213ENST00000485080 ADALQ6DHV7 355 aa19.6■□□□□ 0.73
SREBF1-213ENST00000485080 TMEM192Q8IY95 271 aa19.6■□□□□ 0.73
SREBF1-213ENST00000485080 TMEM161BQ8NDZ6 487 aa19.6■□□□□ 0.73
SREBF1-213ENST00000485080 SPATA32Q96LK8 384 aa19.6■□□□□ 0.73
SREBF1-213ENST00000485080 CASD1Q96PB1 797 aa19.6■□□□□ 0.73
SREBF1-213ENST00000485080 PYM1Q9BRP8 204 aaKnown RBP19.6■□□□□ 0.73
SREBF1-213ENST00000485080 KIFC3Q9BVG8 833 aa19.6■□□□□ 0.73
SREBF1-213ENST00000485080 PLVAPQ9BX97 442 aa19.6■□□□□ 0.73
SREBF1-213ENST00000485080 PRDM12Q9H4Q4 367 aa19.6■□□□□ 0.73
SREBF1-213ENST00000485080 PARVGQ9HBI0 331 aa19.6■□□□□ 0.73
SREBF1-213ENST00000485080 EYSQ5T1H1 3165 aa19.6■□□□□ 0.73
SREBF1-213ENST00000485080 RALGAPA2Q2PPJ7 1873 aa19.59■□□□□ 0.73
SREBF1-213ENST00000485080 NPHP3-ACAD11A0A0J9YXS1 232 aa19.59■□□□□ 0.73
SREBF1-213ENST00000485080 CCDC169A6NNP5 214 aa19.59■□□□□ 0.73
SREBF1-213ENST00000485080 SFI1A8K8P3 1242 aa19.59■□□□□ 0.73
SREBF1-213ENST00000485080 H0YCG3 227 aa19.59■□□□□ 0.73
SREBF1-213ENST00000485080 B4GALT5O43286 388 aa19.59■□□□□ 0.73
SREBF1-213ENST00000485080 FGFR1P11362 822 aa19.59■□□□□ 0.73
SREBF1-213ENST00000485080 BMPR1AP36894 532 aa19.59■□□□□ 0.73
SREBF1-213ENST00000485080 PRPF4BQ13523 1007 aaKnown RBP19.59■□□□□ 0.73
SREBF1-213ENST00000485080 EPC2Q52LR7 807 aa19.59■□□□□ 0.73
SREBF1-213ENST00000485080 CLLU1OSQ5K130 101 aa19.59■□□□□ 0.73
SREBF1-213ENST00000485080 SLC27A1Q6PCB7 646 aa19.59■□□□□ 0.73
SREBF1-213ENST00000485080 SPRED2Q7Z698 418 aa19.59■□□□□ 0.73
SREBF1-213ENST00000485080 IQUBQ8NA54 791 aa19.59■□□□□ 0.73
SREBF1-213ENST00000485080 ARNTL2Q8WYA1 636 aa19.59■□□□□ 0.73
SREBF1-213ENST00000485080 CPB2Q96IY4 423 aa19.59■□□□□ 0.73
SREBF1-213ENST00000485080 C17orf80Q9BSJ5 609 aa19.59■□□□□ 0.73
SREBF1-213ENST00000485080 UBN1Q9NPG3 1134 aa19.59■□□□□ 0.73
SREBF1-213ENST00000485080 KBTBD4Q9NVX7 518 aa19.59■□□□□ 0.73
SREBF1-213ENST00000485080 MRPL42Q9Y6G3 142 aaKnown RBP19.59■□□□□ 0.73
SREBF1-213ENST00000485080 ZMYM2Q9UBW7 1377 aa19.58■□□□□ 0.73
SREBF1-213ENST00000485080 PRUNE2Q8WUY3 3088 aa19.58■□□□□ 0.73
SREBF1-213ENST00000485080 PRRC2BQ5JSZ5 2229 aaKnown RBP19.58■□□□□ 0.73
SREBF1-213ENST00000485080 EPOPA6NHQ4 379 aa19.58■□□□□ 0.72
SREBF1-213ENST00000485080 TBKBP1A7MCY6 615 aa19.58■□□□□ 0.72
SREBF1-213ENST00000485080 N4BP3O15049 544 aa19.58■□□□□ 0.72
SREBF1-213ENST00000485080 INPPL1O15357 1258 aa19.58■□□□□ 0.72
SREBF1-213ENST00000485080 CMA1P23946 247 aa19.58■□□□□ 0.72
SREBF1-213ENST00000485080 ABCD1P33897 745 aa19.58■□□□□ 0.72
SREBF1-213ENST00000485080 ANP32AP39687 249 aaKnown RBP19.58■□□□□ 0.72
SREBF1-213ENST00000485080 GATMP50440 423 aa19.58■□□□□ 0.72
SREBF1-213ENST00000485080 NCKAP1LP55160 1127 aa19.58■□□□□ 0.72
SREBF1-213ENST00000485080 RAD51AP2Q09MP3 1159 aa19.58■□□□□ 0.72
SREBF1-213ENST00000485080 DHX8Q14562 1220 aaKnown RBP19.58■□□□□ 0.72
SREBF1-213ENST00000485080 CNNM4Q6P4Q7 775 aa19.58■□□□□ 0.72
SREBF1-213ENST00000485080 TAS1R3Q7RTX0 852 aa19.58■□□□□ 0.72
SREBF1-213ENST00000485080 ABI1Q8IZP0 508 aa19.58■□□□□ 0.72
SREBF1-213ENST00000485080 SMG8Q8ND04 991 aaKnown RBP19.58■□□□□ 0.72
SREBF1-213ENST00000485080 SLC17A8Q8NDX2 589 aa19.58■□□□□ 0.72
SREBF1-213ENST00000485080 MYLIPQ8WY64 445 aa19.58■□□□□ 0.72
SREBF1-213ENST00000485080 DNAJC19Q96DA6 116 aa19.58■□□□□ 0.72
SREBF1-213ENST00000485080 GAS2L1Q99501 681 aaPredicted RBP19.58■□□□□ 0.72
SREBF1-213ENST00000485080 TNMDQ9H2S6 317 aa19.58■□□□□ 0.72
SREBF1-213ENST00000485080 MAGEF1Q9HAY2 307 aa19.58■□□□□ 0.72
SREBF1-213ENST00000485080 FAM13BQ9NYF5 915 aa19.58■□□□□ 0.72
SREBF1-213ENST00000485080 LMCD1Q9NZU5 365 aa19.58■□□□□ 0.72
SREBF1-213ENST00000485080 FAM237AA0A1B0GTK4 181 aa19.57■□□□□ 0.72
SREBF1-213ENST00000485080 MYMKA6NI61 221 aa19.57■□□□□ 0.72
SREBF1-213ENST00000485080 TTLL13PA6NNM8 815 aa19.57■□□□□ 0.72
SREBF1-213ENST00000485080 LPXNO60711 386 aa19.57■□□□□ 0.72
SREBF1-213ENST00000485080 FAM13AO94988 1023 aa19.57■□□□□ 0.72
SREBF1-213ENST00000485080 EDN1P05305 212 aa19.57■□□□□ 0.72
SREBF1-213ENST00000485080 KRT18P05783 430 aaKnown RBP19.57■□□□□ 0.72
SREBF1-213ENST00000485080 MAPTP10636 758 aaKnown RBP19.57■□□□□ 0.72
SREBF1-213ENST00000485080 ADGRE1Q14246 886 aa19.57■□□□□ 0.72
SREBF1-213ENST00000485080 NT5DC1Q5TFE4 455 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms