RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 CHRDL2Q6WN34 429 aa19.63■□□□□ 0.73
CPNE1-224ENST00000483359 APBB2Q92870 758 aa19.63■□□□□ 0.73
CPNE1-224ENST00000483359 SLC39A2Q9NP94 309 aa19.63■□□□□ 0.73
CPNE1-224ENST00000483359 OLFML3Q9NRN5 406 aa19.63■□□□□ 0.73
CPNE1-224ENST00000483359 AGPAT5Q9NUQ2 364 aa19.63■□□□□ 0.73
CPNE1-224ENST00000483359 PVALEFA0A1B0GWK0 134 aa19.62■□□□□ 0.73
CPNE1-224ENST00000483359 ACTN1P12814 892 aa19.62■□□□□ 0.73
CPNE1-224ENST00000483359 PRPF4BQ13523 1007 aaKnown RBP19.62■□□□□ 0.73
CPNE1-224ENST00000483359 IKBKEQ14164 716 aa19.62■□□□□ 0.73
CPNE1-224ENST00000483359 LINC01599Q8WXQ3 324 aa19.62■□□□□ 0.73
CPNE1-224ENST00000483359 FZD8Q9H461 694 aa19.62■□□□□ 0.73
CPNE1-224ENST00000483359 KCNG1Q9UIX4 513 aa19.62■□□□□ 0.73
CPNE1-224ENST00000483359 ARF4P18085 180 aaPredicted RBP19.61■□□□□ 0.73
CPNE1-224ENST00000483359 STRN3Q13033 797 aa19.61■□□□□ 0.73
CPNE1-224ENST00000483359 ZNF720Q7Z2F6 126 aa19.61■□□□□ 0.73
CPNE1-224ENST00000483359 ADAM2Q99965 735 aa19.61■□□□□ 0.73
CPNE1-224ENST00000483359 CXXC1Q9P0U4 656 aaPredicted RBP19.61■□□□□ 0.73
CPNE1-224ENST00000483359 PCDHA5Q9Y5H7 936 aa19.61■□□□□ 0.73
CPNE1-224ENST00000483359 MICAL3Q7RTP6 2002 aa19.61■□□□□ 0.73
CPNE1-224ENST00000483359 H0YCG3 227 aa19.61■□□□□ 0.73
CPNE1-224ENST00000483359 ZSCAN20P17040 1043 aaPredicted RBP19.61■□□□□ 0.73
CPNE1-224ENST00000483359 EHHADHQ08426 723 aa19.61■□□□□ 0.73
CPNE1-224ENST00000483359 KCNA1Q09470 495 aa19.61■□□□□ 0.73
CPNE1-224ENST00000483359 TWF2Q6IBS0 349 aaKnown RBP19.61■□□□□ 0.73
CPNE1-224ENST00000483359 SMARCE1Q969G3 411 aa19.61■□□□□ 0.73
CPNE1-224ENST00000483359 NUP62CLQ9H1M0 184 aa19.61■□□□□ 0.73
CPNE1-224ENST00000483359 TMEM134Q9H6X4 195 aa19.61■□□□□ 0.73
CPNE1-224ENST00000483359 TBX20Q9UMR3 447 aa19.61■□□□□ 0.73
CPNE1-224ENST00000483359 CNTNAP2Q9UHC6 1331 aa19.61■□□□□ 0.73
CPNE1-224ENST00000483359 ACKR2O00590 384 aa19.6■□□□□ 0.73
CPNE1-224ENST00000483359 MBD3O95983 291 aa19.6■□□□□ 0.73
CPNE1-224ENST00000483359 HOXA11P31270 313 aaPredicted RBP19.6■□□□□ 0.73
CPNE1-224ENST00000483359 SHHQ15465 462 aa19.6■□□□□ 0.73
CPNE1-224ENST00000483359 ISM2Q6H9L7 571 aa19.6■□□□□ 0.73
CPNE1-224ENST00000483359 PPP4R3CPQ6ZMV5 832 aa19.6■□□□□ 0.73
CPNE1-224ENST00000483359 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.6■□□□□ 0.731e-8■■□□□ 11.7
CPNE1-224ENST00000483359 TMCO2Q7Z6W1 182 aaPredicted RBP19.6■□□□□ 0.73
CPNE1-224ENST00000483359 BICD1Q96G01 975 aa19.6■□□□□ 0.73
CPNE1-224ENST00000483359 PRIMPOLQ96LW4 560 aa19.6■□□□□ 0.73
CPNE1-224ENST00000483359 TARS2Q9BW92 718 aaKnown RBP19.6■□□□□ 0.73
CPNE1-224ENST00000483359 FTHL17Q9BXU8 183 aa19.6■□□□□ 0.73
CPNE1-224ENST00000483359 IKZF4Q9H2S9 585 aa19.6■□□□□ 0.73
CPNE1-224ENST00000483359 CLSTN2Q9H4D0 955 aa19.6■□□□□ 0.73
CPNE1-224ENST00000483359 PRPF6O94906 941 aaKnown RBP19.59■□□□□ 0.73
CPNE1-224ENST00000483359 SMC2O95347 1197 aa19.59■□□□□ 0.73
CPNE1-224ENST00000483359 GTF2BQ00403 316 aa19.59■□□□□ 0.73
CPNE1-224ENST00000483359 NCBP1Q09161 790 aaKnown RBP19.59■□□□□ 0.73
CPNE1-224ENST00000483359 STK4Q13043 487 aa19.59■□□□□ 0.73
CPNE1-224ENST00000483359 RTN4RL1Q86UN2 441 aaPredicted RBP19.59■□□□□ 0.73
CPNE1-224ENST00000483359 CCDC47Q96A33 483 aaKnown RBP19.59■□□□□ 0.73
CPNE1-224ENST00000483359 MRPL4Q9BYD3 311 aaKnown RBP19.59■□□□□ 0.73
CPNE1-224ENST00000483359 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.59■□□□□ 0.73
CPNE1-224ENST00000483359 WDR5P61964 334 aaKnown RBP19.59■□□□□ 0.73
CPNE1-224ENST00000483359 DEFB103AP81534 67 aa19.59■□□□□ 0.73
CPNE1-224ENST00000483359 PCBP1Q15365 356 aaKnown RBP eCLIP19.59■□□□□ 0.731e-8■■■■■ 43
CPNE1-224ENST00000483359 FAM187BQ17R55 369 aa19.59■□□□□ 0.73
CPNE1-224ENST00000483359 NT5DC1Q5TFE4 455 aa19.59■□□□□ 0.73
CPNE1-224ENST00000483359 NOTUMQ6P988 496 aa19.59■□□□□ 0.73
CPNE1-224ENST00000483359 MYOCDQ8IZQ8 938 aa19.59■□□□□ 0.73
CPNE1-224ENST00000483359 KIAA0895Q8NCT3 520 aa19.59■□□□□ 0.73
CPNE1-224ENST00000483359 SLC17A8Q8NDX2 589 aa19.59■□□□□ 0.73
CPNE1-224ENST00000483359 RNPC3Q96LT9 517 aaKnown RBP19.59■□□□□ 0.73
CPNE1-224ENST00000483359 GDAQ9Y2T3 454 aa19.59■□□□□ 0.73
CPNE1-224ENST00000483359 ABHD14A-ACY1A0A1B0GW23 586 aa19.58■□□□□ 0.73
CPNE1-224ENST00000483359 BIN1O00499 593 aa19.58■□□□□ 0.73
CPNE1-224ENST00000483359 HNRNPDLO14979 420 aaKnown RBP19.58■□□□□ 0.73
CPNE1-224ENST00000483359 PPP1R37O75864 691 aa19.58■□□□□ 0.73
CPNE1-224ENST00000483359 BAIAP3O94812 1187 aa19.58■□□□□ 0.73
CPNE1-224ENST00000483359 KCNJ6P48051 423 aa19.58■□□□□ 0.73
CPNE1-224ENST00000483359 DSC3Q14574 896 aa19.58■□□□□ 0.73
CPNE1-224ENST00000483359 ATF7IP2Q5U623 682 aa19.58■□□□□ 0.73
CPNE1-224ENST00000483359 MAP4K3Q8IVH8 894 aa19.58■□□□□ 0.73
CPNE1-224ENST00000483359 ELOA2Q8IYF1 753 aaPredicted RBP19.58■□□□□ 0.73
CPNE1-224ENST00000483359 SMYD4Q8IYR2 804 aaPredicted RBP19.58■□□□□ 0.73
CPNE1-224ENST00000483359 TSPYL2Q9H2G4 693 aaPredicted RBP19.58■□□□□ 0.73
CPNE1-224ENST00000483359 ST6GALNAC4Q9H4F1 302 aa19.58■□□□□ 0.73
CPNE1-224ENST00000483359 ANKFY1Q9P2R3 1169 aa19.58■□□□□ 0.73
CPNE1-224ENST00000483359 ENPP3O14638 875 aa19.57■□□□□ 0.72
CPNE1-224ENST00000483359 RHOBTB3O94955 611 aa19.57■□□□□ 0.72
CPNE1-224ENST00000483359 HARSP12081 509 aaKnown RBP19.57■□□□□ 0.72
CPNE1-224ENST00000483359 EEF1DP3Q658K8 133 aa19.57■□□□□ 0.72
CPNE1-224ENST00000483359 NELFCDQ8IXH7 590 aa19.57■□□□□ 0.72
CPNE1-224ENST00000483359 HERVK_113Q902F9 699 aa19.57■□□□□ 0.72
CPNE1-224ENST00000483359 EIF2AQ9BY44 585 aaKnown RBP19.57■□□□□ 0.72
CPNE1-224ENST00000483359 PDZD7Q9H5P4 517 aa19.57■□□□□ 0.72
CPNE1-224ENST00000483359 MAPK8IP1Q9UQF2 711 aa19.57■□□□□ 0.72
CPNE1-224ENST00000483359 PCDHB13Q9Y5F0 798 aa19.57■□□□□ 0.72
CPNE1-224ENST00000483359 TISP43B9A030 160 aa19.57■□□□□ 0.72
CPNE1-224ENST00000483359 UPP2O95045 317 aa19.57■□□□□ 0.72
CPNE1-224ENST00000483359 AXLP30530 894 aa19.57■□□□□ 0.72
CPNE1-224ENST00000483359 LIG4P49917 911 aa19.57■□□□□ 0.72
CPNE1-224ENST00000483359 KCNB1Q14721 858 aa19.57■□□□□ 0.72
CPNE1-224ENST00000483359 L1TD1Q5T7N2 865 aaKnown RBP19.57■□□□□ 0.72
CPNE1-224ENST00000483359 FAM117BQ6P1L5 589 aa19.57■□□□□ 0.72
CPNE1-224ENST00000483359 RNF169Q8NCN4 708 aa19.57■□□□□ 0.72
CPNE1-224ENST00000483359 GSDMAQ96QA5 445 aa19.57■□□□□ 0.72
CPNE1-224ENST00000483359 ACO2Q99798 780 aaKnown RBP19.57■□□□□ 0.72
CPNE1-224ENST00000483359 STRA6Q9BX79 667 aa19.57■□□□□ 0.72
CPNE1-224ENST00000483359 CHST12Q9NRB3 414 aa19.57■□□□□ 0.72
CPNE1-224ENST00000483359 RGS18Q9NS28 235 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms