RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 CNOT8Q9UFF9 292 aaKnown RBP16.11■□□□□ 0.17
ATG4B-220ENST00000482507 SLC12A6Q9UHW9 1150 aa16.11■□□□□ 0.17
ATG4B-220ENST00000482507 TISP43B9A030 160 aa16.1■□□□□ 0.17
ATG4B-220ENST00000482507 ERLIN2O94905 339 aa16.1■□□□□ 0.17
ATG4B-220ENST00000482507 MAPK7Q13164 816 aa16.1■□□□□ 0.17
ATG4B-220ENST00000482507 ZNF211Q13398 564 aaPredicted RBP16.1■□□□□ 0.17
ATG4B-220ENST00000482507 ODR4Q5SWX8 454 aa16.1■□□□□ 0.17
ATG4B-220ENST00000482507 SLC20A1Q8WUM9 679 aa16.1■□□□□ 0.17
ATG4B-220ENST00000482507 ALG3Q92685 438 aa16.1■□□□□ 0.17
ATG4B-220ENST00000482507 TRIM31Q9BZY9 425 aa16.1■□□□□ 0.17
ATG4B-220ENST00000482507 APEX2Q9UBZ4 518 aa16.1■□□□□ 0.17
ATG4B-220ENST00000482507 TTC7AQ9ULT0 858 aaPredicted RBP16.1■□□□□ 0.17
ATG4B-220ENST00000482507 FOXN3O00409 490 aaPredicted RBP16.1■□□□□ 0.17
ATG4B-220ENST00000482507 DLG4P78352 724 aa16.1■□□□□ 0.17
ATG4B-220ENST00000482507 AADACL2Q6P093 401 aa16.1■□□□□ 0.17
ATG4B-220ENST00000482507 STRA6Q9BX79 667 aa16.1■□□□□ 0.17
ATG4B-220ENST00000482507 EFCC1Q9HA90 598 aa16.1■□□□□ 0.17
ATG4B-220ENST00000482507 GAS7O60861 476 aa16.09■□□□□ 0.17
ATG4B-220ENST00000482507 USP2O75604 605 aaPredicted RBP16.09■□□□□ 0.17
ATG4B-220ENST00000482507 TMOD1P28289 359 aa16.09■□□□□ 0.17
ATG4B-220ENST00000482507 STAT2P52630 851 aa16.09■□□□□ 0.17
ATG4B-220ENST00000482507 MYL7Q01449 175 aa16.09■□□□□ 0.17
ATG4B-220ENST00000482507 DHX9Q08211 1270 aaKnown RBP16.09■□□□□ 0.17
ATG4B-220ENST00000482507 FBXW10Q5XX13 1052 aa16.09■□□□□ 0.17
ATG4B-220ENST00000482507 HOOK2Q96ED9 719 aa16.09■□□□□ 0.17
ATG4B-220ENST00000482507 DCAF8L1A6NGE4 600 aa16.09■□□□□ 0.17
ATG4B-220ENST00000482507 GOLGA6L10A6NI86 522 aa16.09■□□□□ 0.17
ATG4B-220ENST00000482507 PPP1R12BO60237 982 aaPredicted RBP16.09■□□□□ 0.17
ATG4B-220ENST00000482507 PRPF4BQ13523 1007 aaKnown RBP16.09■□□□□ 0.17
ATG4B-220ENST00000482507 SUPT20HL1Q3ZLR7 823 aa16.09■□□□□ 0.17
ATG4B-220ENST00000482507 SAMD1Q6SPF0 538 aaPredicted RBP16.09■□□□□ 0.17
ATG4B-220ENST00000482507 B4GALNT4Q76KP1 1039 aa16.09■□□□□ 0.17
ATG4B-220ENST00000482507 CCDC26Q8TAB7 109 aa16.09■□□□□ 0.17
ATG4B-220ENST00000482507 CTNNBL1Q8WYA6 563 aaPredicted RBP16.09■□□□□ 0.17
ATG4B-220ENST00000482507 KLRG1Q96E93 195 aa16.09■□□□□ 0.17
ATG4B-220ENST00000482507 PAGR1Q9BTK6 254 aa16.09■□□□□ 0.17
ATG4B-220ENST00000482507 ZNF341Q9BYN7 854 aa16.09■□□□□ 0.17
ATG4B-220ENST00000482507 FRMD4BQ9Y2L6 1034 aa16.09■□□□□ 0.17
ATG4B-220ENST00000482507 SSC5DA1L4H1 1573 aa16.08■□□□□ 0.17
ATG4B-220ENST00000482507 E7EVH7 732 aa16.08■□□□□ 0.17
ATG4B-220ENST00000482507 CTNND1O60716 968 aaKnown RBP16.08■□□□□ 0.17
ATG4B-220ENST00000482507 HIP1RO75146 1068 aa16.08■□□□□ 0.17
ATG4B-220ENST00000482507 ASNSP08243 561 aa16.08■□□□□ 0.17
ATG4B-220ENST00000482507 PTENP60484 403 aa16.08■□□□□ 0.17
ATG4B-220ENST00000482507 CEP55Q53EZ4 464 aa16.08■□□□□ 0.17
ATG4B-220ENST00000482507 DCAF15Q66K64 600 aa16.08■□□□□ 0.17
ATG4B-220ENST00000482507 B3GNT9Q6UX72 402 aa16.08■□□□□ 0.17
ATG4B-220ENST00000482507 HS2ST1Q7LGA3 356 aa16.08■□□□□ 0.17
ATG4B-220ENST00000482507 KCTD17Q8N5Z5 321 aa16.08■□□□□ 0.17
ATG4B-220ENST00000482507 ZSWIM2Q8NEG5 633 aa16.08■□□□□ 0.17
ATG4B-220ENST00000482507 GLG1Q92896 1179 aa16.08■□□□□ 0.17
ATG4B-220ENST00000482507 CDCA5Q96FF9 252 aa16.08■□□□□ 0.17
ATG4B-220ENST00000482507 TXLNGYQ9BZA5 131 aa16.08■□□□□ 0.17
ATG4B-220ENST00000482507 ZNF408Q9H9D4 720 aa16.08■□□□□ 0.17
ATG4B-220ENST00000482507 PPANQ9NQ55 473 aaKnown RBP16.08■□□□□ 0.17
ATG4B-220ENST00000482507 SEPT11Q9NVA2 429 aaKnown RBP16.08■□□□□ 0.17
ATG4B-220ENST00000482507 TMOD4Q9NZQ9 345 aa16.08■□□□□ 0.17
ATG4B-220ENST00000482507 BCCIPQ9P287 314 aaKnown RBP eCLIP16.08■□□□□ 0.17
ATG4B-220ENST00000482507 MEFVO15553 781 aaPredicted RBP16.08■□□□□ 0.16
ATG4B-220ENST00000482507 POLR2MP0CAP2 368 aa16.08■□□□□ 0.16
ATG4B-220ENST00000482507 FNTAP49354 379 aa16.08■□□□□ 0.16
ATG4B-220ENST00000482507 BFSP1Q12934 665 aa16.08■□□□□ 0.16
ATG4B-220ENST00000482507 KIF22Q14807 665 aa16.08■□□□□ 0.16
ATG4B-220ENST00000482507 ARHGEF19Q8IW93 802 aa16.08■□□□□ 0.16
ATG4B-220ENST00000482507 NACC1Q96RE7 527 aa16.08■□□□□ 0.16
ATG4B-220ENST00000482507 LXNQ9BS40 222 aa16.08■□□□□ 0.16
ATG4B-220ENST00000482507 ZNF577Q9BSK1 485 aa16.08■□□□□ 0.16
ATG4B-220ENST00000482507 EPB41L4BQ9H329 900 aa16.08■□□□□ 0.16
ATG4B-220ENST00000482507 SEL1LQ9UBV2 794 aa16.08■□□□□ 0.16
ATG4B-220ENST00000482507 CHORDC1Q9UHD1 332 aaPredicted RBP16.08■□□□□ 0.16
ATG4B-220ENST00000482507 ATXN2Q99700 1313 aaKnown RBP16.07■□□□□ 0.16
ATG4B-220ENST00000482507 BACH1O14867 736 aa16.07■□□□□ 0.16
ATG4B-220ENST00000482507 EXOC3O60645 756 aa16.07■□□□□ 0.16
ATG4B-220ENST00000482507 FAM107AO95990 144 aa16.07■□□□□ 0.16
ATG4B-220ENST00000482507 TNFAIP3P21580 790 aa16.07■□□□□ 0.16
ATG4B-220ENST00000482507 MARCKSL1P49006 195 aa16.07■□□□□ 0.16
ATG4B-220ENST00000482507 PPP2R5AQ15172 486 aa16.07■□□□□ 0.16
ATG4B-220ENST00000482507 MAEAQ7L5Y9 396 aa16.07■□□□□ 0.16
ATG4B-220ENST00000482507 PNMA8AQ86V59 439 aaPredicted RBP16.07■□□□□ 0.16
ATG4B-220ENST00000482507 ZC3H15Q8WU90 426 aaKnown RBP16.07■□□□□ 0.16
ATG4B-220ENST00000482507 CNKSR2Q8WXI2 1034 aa16.07■□□□□ 0.16
ATG4B-220ENST00000482507 PCIF1Q9H4Z3 704 aa16.07■□□□□ 0.16
ATG4B-220ENST00000482507 ZDHHC18Q9NUE0 388 aa16.07■□□□□ 0.16
ATG4B-220ENST00000482507 NOVA2Q9UNW9 492 aaKnown RBP16.07■□□□□ 0.16
ATG4B-220ENST00000482507 UTP11Q9Y3A2 253 aaKnown RBP16.07■□□□□ 0.16
ATG4B-220ENST00000482507 UBE4BO95155 1302 aa16.07■□□□□ 0.16
ATG4B-220ENST00000482507 PPP3CAQ08209 521 aa16.07■□□□□ 0.16
ATG4B-220ENST00000482507 QPCTQ16769 361 aa16.07■□□□□ 0.16
ATG4B-220ENST00000482507 DUPD1Q68J44 220 aa16.07■□□□□ 0.16
ATG4B-220ENST00000482507 KCNV1Q6PIU1 500 aa16.07■□□□□ 0.16
ATG4B-220ENST00000482507 ZDHHC14Q8IZN3 488 aa16.07■□□□□ 0.16
ATG4B-220ENST00000482507 KRT35Q92764 455 aa16.07■□□□□ 0.16
ATG4B-220ENST00000482507 AGPAT1Q99943 283 aa16.07■□□□□ 0.16
ATG4B-220ENST00000482507 ARHGEF10LQ9HCE6 1279 aa16.07■□□□□ 0.16
ATG4B-220ENST00000482507 ODF2LQ9ULJ1 636 aa16.07■□□□□ 0.16
ATG4B-220ENST00000482507 TMX2Q9Y320 296 aa16.07■□□□□ 0.16
ATG4B-220ENST00000482507 PPP2R3BQ9Y5P8 575 aa16.07■□□□□ 0.16
ATG4B-220ENST00000482507 DDX39AO00148 427 aaKnown RBP16.06■□□□□ 0.16
ATG4B-220ENST00000482507 VCAM1P19320 739 aa16.06■□□□□ 0.16
ATG4B-220ENST00000482507 SPP2Q13103 211 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms