RNA–Protein interactions for RNA: ENST00000482227.5

CNKSR1-207, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 2

Gene CNKSR1, Length 2,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-207ENST00000482227 TRAF1Q13077 416 aa16.7■□□□□ 0.26
CNKSR1-207ENST00000482227 LBRQ14739 615 aaKnown RBP16.7■□□□□ 0.26
CNKSR1-207ENST00000482227 UBE2SQ16763 222 aa16.7■□□□□ 0.26
CNKSR1-207ENST00000482227 SGSM1Q2NKQ1 1148 aa16.7■□□□□ 0.26
CNKSR1-207ENST00000482227 CYP4X1Q8N118 509 aa16.7■□□□□ 0.26
CNKSR1-207ENST00000482227 GALNT15Q8N3T1 639 aa16.7■□□□□ 0.26
CNKSR1-207ENST00000482227 ENDOVQ8N8Q3 282 aaKnown RBP16.7■□□□□ 0.26
CNKSR1-207ENST00000482227 ASAP3Q8TDY4 903 aa16.7■□□□□ 0.26
CNKSR1-207ENST00000482227 TXLNGQ9NUQ3 528 aa16.7■□□□□ 0.26
CNKSR1-207ENST00000482227 USP40Q9NVE5 1235 aa16.7■□□□□ 0.26
CNKSR1-207ENST00000482227 KDM3AQ9Y4C1 1321 aa16.7■□□□□ 0.26
CNKSR1-207ENST00000482227 HSPA6P17066 643 aa16.7■□□□□ 0.26
CNKSR1-207ENST00000482227 TAC1P20366 129 aa16.7■□□□□ 0.26
CNKSR1-207ENST00000482227 FOXN2P32314 431 aa16.7■□□□□ 0.26
CNKSR1-207ENST00000482227 KCNJ1P48048 391 aa16.7■□□□□ 0.26
CNKSR1-207ENST00000482227 CTTNQ14247 550 aaKnown RBP16.7■□□□□ 0.26
CNKSR1-207ENST00000482227 SLC5A9Q2M3M2 681 aa16.7■□□□□ 0.26
CNKSR1-207ENST00000482227 MAGEB18Q96M61 343 aa16.7■□□□□ 0.26
CNKSR1-207ENST00000482227 POP1Q99575 1024 aaKnown RBP16.7■□□□□ 0.26
CNKSR1-207ENST00000482227 PITPNM2Q9BZ72 1349 aa16.7■□□□□ 0.26
CNKSR1-207ENST00000482227 PDXKO00764 312 aa16.69■□□□□ 0.26
CNKSR1-207ENST00000482227 COILP38432 576 aaPredicted RBP16.69■□□□□ 0.26
CNKSR1-207ENST00000482227 DRAP1Q14919 205 aaPredicted RBP16.69■□□□□ 0.26
CNKSR1-207ENST00000482227 SEPT14Q6ZU15 432 aa16.69■□□□□ 0.26
CNKSR1-207ENST00000482227 CYFIP1Q7L576 1253 aa16.69■□□□□ 0.26
CNKSR1-207ENST00000482227 LMNTD2Q8IXW0 634 aa16.69■□□□□ 0.26
CNKSR1-207ENST00000482227 CELF1Q92879 486 aaKnown RBP16.69■□□□□ 0.26
CNKSR1-207ENST00000482227 NUDCD1Q96RS6 583 aa16.69■□□□□ 0.26
CNKSR1-207ENST00000482227 RPS6KC1Q96S38 1066 aa16.69■□□□□ 0.26
CNKSR1-207ENST00000482227 ASTN1O14525 1302 aa16.69■□□□□ 0.26
CNKSR1-207ENST00000482227 SNED1Q8TER0 1413 aa16.69■□□□□ 0.26
CNKSR1-207ENST00000482227 GTPBP10A4D1E9 387 aaKnown RBP16.69■□□□□ 0.26
CNKSR1-207ENST00000482227 NR3C1P04150 777 aa16.69■□□□□ 0.26
CNKSR1-207ENST00000482227 KRT18P05783 430 aaKnown RBP16.69■□□□□ 0.26
CNKSR1-207ENST00000482227 TARSP26639 723 aaKnown RBP16.69■□□□□ 0.26
CNKSR1-207ENST00000482227 HIBADHP31937 336 aaKnown RBP16.69■□□□□ 0.26
CNKSR1-207ENST00000482227 STX2P32856 288 aa16.69■□□□□ 0.26
CNKSR1-207ENST00000482227 RFC4P35249 363 aa16.69■□□□□ 0.26
CNKSR1-207ENST00000482227 GCLCP48506 637 aaPredicted RBP16.69■□□□□ 0.26
CNKSR1-207ENST00000482227 PTDSS1P48651 473 aaKnown RBP16.69■□□□□ 0.26
CNKSR1-207ENST00000482227 GIT2Q14161 759 aa16.69■□□□□ 0.26
CNKSR1-207ENST00000482227 CYP1B1Q16678 543 aa16.69■□□□□ 0.26
CNKSR1-207ENST00000482227 SFR1Q86XK3 245 aa16.69■□□□□ 0.26
CNKSR1-207ENST00000482227 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.69■□□□□ 0.26
CNKSR1-207ENST00000482227 SUPT20HQ8NEM7 779 aa16.69■□□□□ 0.26
CNKSR1-207ENST00000482227 SLC7A6OSQ96CW6 309 aaPredicted RBP16.69■□□□□ 0.26
CNKSR1-207ENST00000482227 ERP27Q96DN0 273 aa16.69■□□□□ 0.26
CNKSR1-207ENST00000482227 BORCS6Q96GS4 357 aa16.69■□□□□ 0.26
CNKSR1-207ENST00000482227 ZSWIM1Q9BR11 485 aa16.69■□□□□ 0.26
CNKSR1-207ENST00000482227 STK33Q9BYT3 514 aa16.69■□□□□ 0.26
CNKSR1-207ENST00000482227 DHX36Q9H2U1 1008 aaKnown RBP16.69■□□□□ 0.26
CNKSR1-207ENST00000482227 BCAS3Q9H6U6 928 aa16.69■□□□□ 0.26
CNKSR1-207ENST00000482227 HAO1Q9UJM8 370 aa16.69■□□□□ 0.26
CNKSR1-207ENST00000482227 CHKBQ9Y259 395 aa16.69■□□□□ 0.26
CNKSR1-207ENST00000482227 C2CD2Q9Y426 696 aa16.69■□□□□ 0.26
CNKSR1-207ENST00000482227 ANKRD62A6NC57 917 aa16.68■□□□□ 0.26
CNKSR1-207ENST00000482227 MED24O75448 989 aa16.68■□□□□ 0.26
CNKSR1-207ENST00000482227 TTLL1O95922 423 aa16.68■□□□□ 0.26
CNKSR1-207ENST00000482227 PYGMP11217 842 aa16.68■□□□□ 0.26
CNKSR1-207ENST00000482227 CHKAP35790 457 aa16.68■□□□□ 0.26
CNKSR1-207ENST00000482227 TNIP1Q15025 636 aa16.68■□□□□ 0.26
CNKSR1-207ENST00000482227 SIX1Q15475 284 aaPredicted RBP16.68■□□□□ 0.26
CNKSR1-207ENST00000482227 PPP1R15BQ5SWA1 713 aa16.68■□□□□ 0.26
CNKSR1-207ENST00000482227 DZIP1Q86YF9 867 aaKnown RBP16.68■□□□□ 0.26
CNKSR1-207ENST00000482227 CCDC105Q8IYK2 499 aa16.68■□□□□ 0.26
CNKSR1-207ENST00000482227 AGGF1Q8N302 714 aaeCLIP16.68■□□□□ 0.26
CNKSR1-207ENST00000482227 TGFBRAP1Q8WUH2 860 aa16.68■□□□□ 0.26
CNKSR1-207ENST00000482227 C7orf43Q8WVR3 580 aa16.68■□□□□ 0.26
CNKSR1-207ENST00000482227 EYA3Q99504 573 aa16.68■□□□□ 0.26
CNKSR1-207ENST00000482227 METTL14Q9HCE5 456 aaKnown RBP16.68■□□□□ 0.26
CNKSR1-207ENST00000482227 SAP30BPQ9UHR5 308 aaKnown RBP16.68■□□□□ 0.26
CNKSR1-207ENST00000482227 FRMPD2Q68DX3 1309 aaPredicted RBP16.68■□□□□ 0.26
CNKSR1-207ENST00000482227 KIF13BQ9NQT8 1826 aa16.68■□□□□ 0.26
CNKSR1-207ENST00000482227 T-ENOLP0DO92 83 aa16.68■□□□□ 0.26
CNKSR1-207ENST00000482227 CETPP11597 493 aa16.68■□□□□ 0.26
CNKSR1-207ENST00000482227 ACADSP16219 412 aa16.68■□□□□ 0.26
CNKSR1-207ENST00000482227 SP100P23497 879 aaPredicted RBP16.68■□□□□ 0.26
CNKSR1-207ENST00000482227 KCNA1Q09470 495 aa16.68■□□□□ 0.26
CNKSR1-207ENST00000482227 TMEM154Q6P9G4 183 aa16.68■□□□□ 0.26
CNKSR1-207ENST00000482227 FAM47EQ6ZV65 393 aa16.68■□□□□ 0.26
CNKSR1-207ENST00000482227 TTC8Q8TAM2 541 aa16.68■□□□□ 0.26
CNKSR1-207ENST00000482227 ZFAND2BQ8WV99 257 aa16.68■□□□□ 0.26
CNKSR1-207ENST00000482227 FAM136AQ96C01 138 aa16.68■□□□□ 0.26
CNKSR1-207ENST00000482227 CEP95Q96GE4 821 aa16.68■□□□□ 0.26
CNKSR1-207ENST00000482227 KIAA1683Q9H0B3 1180 aa16.68■□□□□ 0.26
CNKSR1-207ENST00000482227 DNAJC12Q9UKB3 198 aa16.68■□□□□ 0.26
CNKSR1-207ENST00000482227 POTEFA5A3E0 1075 aa16.67■□□□□ 0.26
CNKSR1-207ENST00000482227 MIF4GDA9UHW6 222 aaKnown RBP16.67■□□□□ 0.26
CNKSR1-207ENST00000482227 hCG_1984214I3L0E3 225 aa16.67■□□□□ 0.26
CNKSR1-207ENST00000482227 CLIC2O15247 247 aa16.67■□□□□ 0.26
CNKSR1-207ENST00000482227 SLC16A3O15427 465 aaKnown RBP16.67■□□□□ 0.26
CNKSR1-207ENST00000482227 CALUO43852 315 aaPredicted RBP16.67■□□□□ 0.26
CNKSR1-207ENST00000482227 MARCH6O60337 910 aa16.67■□□□□ 0.26
CNKSR1-207ENST00000482227 EYA4O95677 639 aa16.67■□□□□ 0.26
CNKSR1-207ENST00000482227 POTEIP0CG38 1075 aa16.67■□□□□ 0.26
CNKSR1-207ENST00000482227 CNGA1P29973 690 aa16.67■□□□□ 0.26
CNKSR1-207ENST00000482227 CLK2P49760 499 aaKnown RBP16.67■□□□□ 0.26
CNKSR1-207ENST00000482227 KLC1Q07866 573 aa16.67■□□□□ 0.26
CNKSR1-207ENST00000482227 POTEGQ6S5H5 508 aa16.67■□□□□ 0.26
CNKSR1-207ENST00000482227 POTEEQ6S8J3 1075 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms