RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 TIPINQ9BVW5 301 aa13.52□□□□□ -0.25
TRA2B-212ENST00000480461 FGFBP2Q9BYJ0 223 aa13.52□□□□□ -0.25
TRA2B-212ENST00000480461 TNMDQ9H2S6 317 aa13.52□□□□□ -0.25
TRA2B-212ENST00000480461 ERVK-5Q9HDB9 667 aa13.52□□□□□ -0.25
TRA2B-212ENST00000480461 USP25Q9UHP3 1055 aa13.52□□□□□ -0.25
TRA2B-212ENST00000480461 ST3GAL5Q9UNP4 418 aa13.52□□□□□ -0.25
TRA2B-212ENST00000480461 SQORQ9Y6N5 450 aa13.52□□□□□ -0.25
TRA2B-212ENST00000480461 COL4A4P53420 1690 aaPredicted RBP13.51□□□□□ -0.25
TRA2B-212ENST00000480461 FRMD3A2A2Y4 597 aa13.51□□□□□ -0.25
TRA2B-212ENST00000480461 ZBBXA8MT70 800 aa13.51□□□□□ -0.25
TRA2B-212ENST00000480461 KLRC4O43908 158 aa13.51□□□□□ -0.25
TRA2B-212ENST00000480461 MGEA5O60502 916 aa13.51□□□□□ -0.25
TRA2B-212ENST00000480461 RPLP2P05387 115 aaKnown RBP13.51□□□□□ -0.25
TRA2B-212ENST00000480461 PLS3P13797 630 aa13.51□□□□□ -0.25
TRA2B-212ENST00000480461 HOXA11P31270 313 aaPredicted RBP13.51□□□□□ -0.25
TRA2B-212ENST00000480461 CDC42EP1Q00587 391 aa13.51□□□□□ -0.25
TRA2B-212ENST00000480461 MBTD1Q05BQ5 628 aa13.51□□□□□ -0.25
TRA2B-212ENST00000480461 AMHR2Q16671 573 aa13.51□□□□□ -0.25
TRA2B-212ENST00000480461 GPT2Q8TD30 523 aa13.51□□□□□ -0.25
TRA2B-212ENST00000480461 ERCC4Q92889 916 aaPredicted RBP13.51□□□□□ -0.25
TRA2B-212ENST00000480461 DRC1Q96MC2 740 aa13.51□□□□□ -0.25
TRA2B-212ENST00000480461 GBP4Q96PP9 640 aa13.51□□□□□ -0.25
TRA2B-212ENST00000480461 GCOM2Q9BZD3 368 aaPredicted RBP13.51□□□□□ -0.25
TRA2B-212ENST00000480461 CERS4Q9HA82 394 aa13.51□□□□□ -0.25
TRA2B-212ENST00000480461 DACT1Q9NYF0 836 aa13.51□□□□□ -0.25
TRA2B-212ENST00000480461 ODF2LQ9ULJ1 636 aa13.51□□□□□ -0.25
TRA2B-212ENST00000480461 SCN5AQ14524 2016 aa13.51□□□□□ -0.25
TRA2B-212ENST00000480461 LRRIQ4A6NIV6 560 aa13.5□□□□□ -0.25
TRA2B-212ENST00000480461 M0QZ92 97 aa13.5□□□□□ -0.25
TRA2B-212ENST00000480461 SLC16A4O15374 487 aa13.5□□□□□ -0.25
TRA2B-212ENST00000480461 RPS6KA5O75582 802 aa13.5□□□□□ -0.25
TRA2B-212ENST00000480461 KRT18P05783 430 aaKnown RBP13.5□□□□□ -0.25
TRA2B-212ENST00000480461 NMT1P30419 496 aaKnown RBP13.5□□□□□ -0.25
TRA2B-212ENST00000480461 MCM4P33991 863 aa13.5□□□□□ -0.25
TRA2B-212ENST00000480461 RFC2P35250 354 aa13.5□□□□□ -0.25
TRA2B-212ENST00000480461 NAMPTP43490 491 aa13.5□□□□□ -0.25
TRA2B-212ENST00000480461 EHHADHQ08426 723 aa13.5□□□□□ -0.25
TRA2B-212ENST00000480461 CDCA2Q69YH5 1023 aaPredicted RBP13.5□□□□□ -0.25
TRA2B-212ENST00000480461 TSHZ1Q6ZSZ6 1077 aa13.5□□□□□ -0.25
TRA2B-212ENST00000480461 CEP57L1Q8IYX8 460 aa13.5□□□□□ -0.25
TRA2B-212ENST00000480461 ZNF710Q8N1W2 664 aa13.5□□□□□ -0.25
TRA2B-212ENST00000480461 MYCT1Q8N699 235 aa13.5□□□□□ -0.25
TRA2B-212ENST00000480461 TMEM161BQ8NDZ6 487 aa13.5□□□□□ -0.25
TRA2B-212ENST00000480461 CNNM3Q8NE01 707 aa13.5□□□□□ -0.25
TRA2B-212ENST00000480461 GLIS3Q8NEA6 775 aa13.5□□□□□ -0.25
TRA2B-212ENST00000480461 TET1Q8NFU7 2136 aa13.5□□□□□ -0.25
TRA2B-212ENST00000480461 SPIRE2Q8WWL2 714 aa13.5□□□□□ -0.25
TRA2B-212ENST00000480461 LINC01599Q8WXQ3 324 aa13.5□□□□□ -0.25
TRA2B-212ENST00000480461 TIGD1Q96MW7 591 aa13.5□□□□□ -0.25
TRA2B-212ENST00000480461 PYM1Q9BRP8 204 aaKnown RBP13.5□□□□□ -0.25
TRA2B-212ENST00000480461 STRA6Q9BX79 667 aa13.5□□□□□ -0.25
TRA2B-212ENST00000480461 NFKBIZQ9BYH8 718 aa13.5□□□□□ -0.25
TRA2B-212ENST00000480461 CCDC113Q9H0I3 377 aa13.5□□□□□ -0.25
TRA2B-212ENST00000480461 FZD8Q9H461 694 aa13.5□□□□□ -0.25
TRA2B-212ENST00000480461 PANK4Q9NVE7 773 aa13.5□□□□□ -0.25
TRA2B-212ENST00000480461 TBC1D7Q9P0N9 293 aa13.5□□□□□ -0.25
TRA2B-212ENST00000480461 ARHGAP28Q9P2N2 729 aa13.5□□□□□ -0.25
TRA2B-212ENST00000480461 SIP14410 1827 aa13.49□□□□□ -0.25
TRA2B-212ENST00000480461 CCDC169A6NNP5 214 aa13.49□□□□□ -0.25
TRA2B-212ENST00000480461 PI4K2BG5E9Z4 385 aa13.49□□□□□ -0.25
TRA2B-212ENST00000480461 ENPP3O14638 875 aa13.49□□□□□ -0.25
TRA2B-212ENST00000480461 B4GALT5O43286 388 aa13.49□□□□□ -0.25
TRA2B-212ENST00000480461 ARHGEF15O94989 841 aa13.49□□□□□ -0.25
TRA2B-212ENST00000480461 PARNO95453 639 aaKnown RBP13.49□□□□□ -0.25
TRA2B-212ENST00000480461 IDEP14735 1019 aa13.49□□□□□ -0.25
TRA2B-212ENST00000480461 CASP5P51878 434 aa13.49□□□□□ -0.25
TRA2B-212ENST00000480461 AMPD3Q01432 767 aa13.49□□□□□ -0.25
TRA2B-212ENST00000480461 DPYDQ12882 1025 aa13.49□□□□□ -0.25
TRA2B-212ENST00000480461 NFX1Q12986 1120 aaKnown RBP13.49□□□□□ -0.25
TRA2B-212ENST00000480461 TFDP1Q14186 410 aa13.49□□□□□ -0.25
TRA2B-212ENST00000480461 DSC3Q14574 896 aa13.49□□□□□ -0.25
TRA2B-212ENST00000480461 ZC2HC1CQ53FD0 456 aaPredicted RBP13.49□□□□□ -0.25
TRA2B-212ENST00000480461 ODR4Q5SWX8 454 aa13.49□□□□□ -0.25
TRA2B-212ENST00000480461 NT5DC1Q5TFE4 455 aa13.49□□□□□ -0.25
TRA2B-212ENST00000480461 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.49□□□□□ -0.25
TRA2B-212ENST00000480461 ZNF720Q7Z2F6 126 aa13.49□□□□□ -0.25
TRA2B-212ENST00000480461 SRGAP1Q7Z6B7 1085 aa13.49□□□□□ -0.25
TRA2B-212ENST00000480461 SFR1Q86XK3 245 aa13.49□□□□□ -0.25
TRA2B-212ENST00000480461 RPUSD2Q8IZ73 545 aaKnown RBP13.49□□□□□ -0.25
TRA2B-212ENST00000480461 HLA-CQ95604 372 aa13.49□□□□□ -0.25
TRA2B-212ENST00000480461 IFT74Q96LB3 600 aa13.49□□□□□ -0.25
TRA2B-212ENST00000480461 IFIH1Q9BYX4 1025 aaKnown RBP13.49□□□□□ -0.25
TRA2B-212ENST00000480461 IKZF4Q9H2S9 585 aa13.49□□□□□ -0.25
TRA2B-212ENST00000480461 ZHX3Q9H4I2 956 aa13.49□□□□□ -0.25
TRA2B-212ENST00000480461 C17orf75Q9HAS0 396 aa13.49□□□□□ -0.25
TRA2B-212ENST00000480461 MAGEF1Q9HAY2 307 aa13.49□□□□□ -0.25
TRA2B-212ENST00000480461 PARVGQ9HBI0 331 aa13.49□□□□□ -0.25
TRA2B-212ENST00000480461 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.48□□□□□ -0.25
TRA2B-212ENST00000480461 INO80B-WBP1J3KQ70 363 aa13.48□□□□□ -0.25
TRA2B-212ENST00000480461 TRAK2O60296 914 aa13.48□□□□□ -0.25
TRA2B-212ENST00000480461 FAM13AO94988 1023 aa13.48□□□□□ -0.25
TRA2B-212ENST00000480461 MAPTP10636 758 aaKnown RBP13.48□□□□□ -0.25
TRA2B-212ENST00000480461 HOXD13P35453 343 aa13.48□□□□□ -0.25
TRA2B-212ENST00000480461 PHKA2P46019 1235 aa13.48□□□□□ -0.25
TRA2B-212ENST00000480461 NCKAP1LP55160 1127 aa13.48□□□□□ -0.25
TRA2B-212ENST00000480461 KCNA1Q09470 495 aa13.48□□□□□ -0.25
TRA2B-212ENST00000480461 COASYQ13057 564 aa13.48□□□□□ -0.25
TRA2B-212ENST00000480461 PNOCQ13519 176 aa13.48□□□□□ -0.25
TRA2B-212ENST00000480461 HERC4Q5GLZ8 1057 aaPredicted RBP13.48□□□□□ -0.25
TRA2B-212ENST00000480461 HAUS6Q7Z4H7 955 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms