RNA–Protein interactions for RNA: ENST00000480210.1

USP54-212, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-212ENST00000480210 NR1I2O75469 434 aa9.08□□□□□ -0.96
USP54-212ENST00000480210 EOMESO95936 686 aa9.08□□□□□ -0.96
USP54-212ENST00000480210 PRKCBP05771 671 aa9.08□□□□□ -0.96
USP54-212ENST00000480210 STAG3L1P0CL83 205 aa9.08□□□□□ -0.96
USP54-212ENST00000480210 CD52P31358 61 aa9.08□□□□□ -0.96
USP54-212ENST00000480210 MCM4P33991 863 aa9.08□□□□□ -0.96
USP54-212ENST00000480210 KCNJ6P48051 423 aa9.08□□□□□ -0.96
USP54-212ENST00000480210 MDM2Q00987 491 aaPredicted RBP9.08□□□□□ -0.96
USP54-212ENST00000480210 MBTD1Q05BQ5 628 aa9.08□□□□□ -0.96
USP54-212ENST00000480210 MAPK8IP2Q13387 824 aaPredicted RBP9.08□□□□□ -0.96
USP54-212ENST00000480210 MBTPS1Q14703 1052 aa9.08□□□□□ -0.96
USP54-212ENST00000480210 POSTNQ15063 836 aa9.08□□□□□ -0.96
USP54-212ENST00000480210 KYAT1Q16773 422 aa9.08□□□□□ -0.96
USP54-212ENST00000480210 HS1BP3Q53T59 392 aa9.08□□□□□ -0.96
USP54-212ENST00000480210 TMEM240Q5SV17 173 aa9.08□□□□□ -0.96
USP54-212ENST00000480210 PRPF38BQ5VTL8 546 aaKnown RBP9.08□□□□□ -0.96
USP54-212ENST00000480210 NOTUMQ6P988 496 aa9.08□□□□□ -0.96
USP54-212ENST00000480210 ZPBP2Q6X784 338 aa9.08□□□□□ -0.96
USP54-212ENST00000480210 ZNF365Q70YC5 407 aa9.08□□□□□ -0.96
USP54-212ENST00000480210 SLC24A5Q71RS6 500 aa9.08□□□□□ -0.96
USP54-212ENST00000480210 HAUS6Q7Z4H7 955 aa9.08□□□□□ -0.96
USP54-212ENST00000480210 FAM228AQ86W67 206 aa9.08□□□□□ -0.96
USP54-212ENST00000480210 KSR1Q8IVT5 923 aa9.08□□□□□ -0.96
USP54-212ENST00000480210 HACE1Q8IYU2 909 aa9.08□□□□□ -0.96
USP54-212ENST00000480210 TMEM161BQ8NDZ6 487 aa9.08□□□□□ -0.96
USP54-212ENST00000480210 SLC9A7Q96T83 725 aa9.08□□□□□ -0.96
USP54-212ENST00000480210 ADPGKQ9BRR6 497 aa9.08□□□□□ -0.96
USP54-212ENST00000480210 MRPL4Q9BYD3 311 aaKnown RBP9.08□□□□□ -0.96
USP54-212ENST00000480210 UBE2OQ9C0C9 1292 aaKnown RBP9.08□□□□□ -0.96
USP54-212ENST00000480210 TSPYL2Q9H2G4 693 aaPredicted RBP9.08□□□□□ -0.96
USP54-212ENST00000480210 ZHX3Q9H4I2 956 aa9.08□□□□□ -0.96
USP54-212ENST00000480210 AGO3Q9H9G7 860 aaKnown RBP9.08□□□□□ -0.96
USP54-212ENST00000480210 MRPL44Q9H9J2 332 aaKnown RBP9.08□□□□□ -0.96
USP54-212ENST00000480210 CDHR5Q9HBB8 845 aa9.08□□□□□ -0.96
USP54-212ENST00000480210 UBN1Q9NPG3 1134 aa9.08□□□□□ -0.96
USP54-212ENST00000480210 RGS18Q9NS28 235 aa9.08□□□□□ -0.96
USP54-212ENST00000480210 AGPAT5Q9NUQ2 364 aa9.08□□□□□ -0.96
USP54-212ENST00000480210 CGNQ9P2M7 1197 aaKnown RBP9.08□□□□□ -0.96
USP54-212ENST00000480210 TRIP11Q15643 1979 aa9.08□□□□□ -0.96
USP54-212ENST00000480210 CEP290O15078 2479 aa9.07□□□□□ -0.96
USP54-212ENST00000480210 NPHP3-ACAD11A0A0J9YXS1 232 aa9.07□□□□□ -0.96
USP54-212ENST00000480210 A0A1B0GUA9 196 aa9.07□□□□□ -0.96
USP54-212ENST00000480210 DENND3A2RUS2 1198 aa9.07□□□□□ -0.96
USP54-212ENST00000480210 CARNS1A5YM72 827 aa9.07□□□□□ -0.96
USP54-212ENST00000480210 SFI1A8K8P3 1242 aa9.07□□□□□ -0.96
USP54-212ENST00000480210 K7ENM7 598 aa9.07□□□□□ -0.96
USP54-212ENST00000480210 ENPP3O14638 875 aa9.07□□□□□ -0.96
USP54-212ENST00000480210 KIAA0391O15091 583 aaKnown RBP9.07□□□□□ -0.96
USP54-212ENST00000480210 SLC16A4O15374 487 aa9.07□□□□□ -0.96
USP54-212ENST00000480210 HOXA2O43364 376 aa9.07□□□□□ -0.96
USP54-212ENST00000480210 RHOBTB3O94955 611 aa9.07□□□□□ -0.96
USP54-212ENST00000480210 PIGRP01833 764 aa9.07□□□□□ -0.96
USP54-212ENST00000480210 AMHP03971 560 aa9.07□□□□□ -0.96
USP54-212ENST00000480210 RPN1P04843 607 aaKnown RBP9.07□□□□□ -0.96
USP54-212ENST00000480210 LIG1P18858 919 aa9.07□□□□□ -0.96
USP54-212ENST00000480210 FAM189BP81408 668 aa9.07□□□□□ -0.96
USP54-212ENST00000480210 POU5F1Q01860 360 aaKnown RBP9.07□□□□□ -0.96
USP54-212ENST00000480210 EHHADHQ08426 723 aa9.07□□□□□ -0.96
USP54-212ENST00000480210 RAD51AP2Q09MP3 1159 aa9.07□□□□□ -0.96
USP54-212ENST00000480210 DPYDQ12882 1025 aa9.07□□□□□ -0.96
USP54-212ENST00000480210 COASYQ13057 564 aa9.07□□□□□ -0.96
USP54-212ENST00000480210 PRPF4BQ13523 1007 aaKnown RBP9.07□□□□□ -0.96
USP54-212ENST00000480210 CUL4BQ13620 913 aa9.07□□□□□ -0.96
USP54-212ENST00000480210 DSC3Q14574 896 aa9.07□□□□□ -0.96
USP54-212ENST00000480210 FAM26FQ5R3K3 315 aa9.07□□□□□ -0.96
USP54-212ENST00000480210 SLFN12LQ6IEE8 588 aa9.07□□□□□ -0.96
USP54-212ENST00000480210 TRIML1Q8N9V2 468 aa9.07□□□□□ -0.96
USP54-212ENST00000480210 SPATA20Q8TB22 786 aa9.07□□□□□ -0.96
USP54-212ENST00000480210 ZNF507Q8TCN5 953 aa9.07□□□□□ -0.96
USP54-212ENST00000480210 TMEM40Q8WWA1 233 aa9.07□□□□□ -0.96
USP54-212ENST00000480210 BSNDQ8WZ55 320 aa9.07□□□□□ -0.96
USP54-212ENST00000480210 STAMQ92783 540 aa9.07□□□□□ -0.96
USP54-212ENST00000480210 SMARCE1Q969G3 411 aa9.07□□□□□ -0.96
USP54-212ENST00000480210 SYAP1Q96A49 352 aaPredicted RBP9.07□□□□□ -0.96
USP54-212ENST00000480210 PGBD4Q96DM1 585 aa9.07□□□□□ -0.96
USP54-212ENST00000480210 ACCSQ96QU6 501 aa9.07□□□□□ -0.96
USP54-212ENST00000480210 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.07□□□□□ -0.96
USP54-212ENST00000480210 STRA6Q9BX79 667 aa9.07□□□□□ -0.96
USP54-212ENST00000480210 CCDC113Q9H0I3 377 aa9.07□□□□□ -0.96
USP54-212ENST00000480210 EXOC1Q9NV70 894 aa9.07□□□□□ -0.96
USP54-212ENST00000480210 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.07□□□□□ -0.96
USP54-212ENST00000480210 CNTNAP2Q9UHC6 1331 aa9.06□□□□□ -0.96
USP54-212ENST00000480210 TDRD15B5MCY1 1934 aaKnown RBP9.06□□□□□ -0.96
USP54-212ENST00000480210 A0A0U1RQF3 1178 aa9.06□□□□□ -0.96
USP54-212ENST00000480210 ESPNB1AK53 854 aa9.06□□□□□ -0.96
USP54-212ENST00000480210 KLRC4O43908 158 aa9.06□□□□□ -0.96
USP54-212ENST00000480210 TSPAN1O60635 241 aa9.06□□□□□ -0.96
USP54-212ENST00000480210 LDHAP00338 332 aaKnown RBP9.06□□□□□ -0.96
USP54-212ENST00000480210 ACRP10323 421 aa9.06□□□□□ -0.96
USP54-212ENST00000480210 SARSP49591 514 aaKnown RBP9.06□□□□□ -0.96
USP54-212ENST00000480210 CACNB1Q02641 598 aaPredicted RBP9.06□□□□□ -0.96
USP54-212ENST00000480210 TMEM132AQ24JP5 1023 aa9.06□□□□□ -0.96
USP54-212ENST00000480210 DCAF4L1Q3SXM0 396 aa9.06□□□□□ -0.96
USP54-212ENST00000480210 KMT5BQ4FZB7 885 aa9.06□□□□□ -0.96
USP54-212ENST00000480210 TPRNQ4KMQ1 711 aa9.06□□□□□ -0.96
USP54-212ENST00000480210 COBLL1Q53SF7 1204 aa9.06□□□□□ -0.96
USP54-212ENST00000480210 NT5DC1Q5TFE4 455 aa9.06□□□□□ -0.96
USP54-212ENST00000480210 RASIP1Q5U651 963 aa9.06□□□□□ -0.96
USP54-212ENST00000480210 TWF2Q6IBS0 349 aaKnown RBP9.06□□□□□ -0.96
USP54-212ENST00000480210 SLC27A1Q6PCB7 646 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms