RNA–Protein interactions for RNA: ENST00000477572.1

VPS50-213, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-213ENST00000477572 TOB2Q14106 344 aaPredicted RBP6.46□□□□□ -1.38
VPS50-213ENST00000477572 C1QL3Q5VWW1 255 aa6.46□□□□□ -1.38
VPS50-213ENST00000477572 CCDC62Q6P9F0 684 aa6.46□□□□□ -1.38
VPS50-213ENST00000477572 MSL3Q8N5Y2 521 aaKnown RBP6.46□□□□□ -1.38
VPS50-213ENST00000477572 UBR7Q8N806 425 aa6.46□□□□□ -1.38
VPS50-213ENST00000477572 LARP4BQ92615 738 aaKnown RBP6.46□□□□□ -1.38
VPS50-213ENST00000477572 USP35Q9P2H5 1018 aa6.46□□□□□ -1.38
VPS50-213ENST00000477572 XDHP47989 1333 aa6.46□□□□□ -1.38
VPS50-213ENST00000477572 ADH4P08319 380 aa6.45□□□□□ -1.38
VPS50-213ENST00000477572 ID4P47928 161 aa6.45□□□□□ -1.38
VPS50-213ENST00000477572 PTTG1IPP53801 180 aa6.45□□□□□ -1.38
VPS50-213ENST00000477572 TGFB2P61812 414 aa6.45□□□□□ -1.38
VPS50-213ENST00000477572 PHC1P78364 1004 aa6.45□□□□□ -1.38
VPS50-213ENST00000477572 ATP13A4Q4VNC1 1196 aa6.45□□□□□ -1.38
VPS50-213ENST00000477572 GPR158Q5T848 1215 aa6.45□□□□□ -1.38
VPS50-213ENST00000477572 MFSD5Q6N075 450 aa6.45□□□□□ -1.38
VPS50-213ENST00000477572 PPP1R14CQ8TAE6 165 aa6.45□□□□□ -1.38
VPS50-213ENST00000477572 ST8SIA2Q92186 375 aa6.45□□□□□ -1.38
VPS50-213ENST00000477572 SLC5A5Q92911 643 aa6.45□□□□□ -1.38
VPS50-213ENST00000477572 MENTQ9BUN1 341 aa6.45□□□□□ -1.38
VPS50-213ENST00000477572 TMPRSS11EQ9UL52 423 aa6.45□□□□□ -1.38
VPS50-213ENST00000477572 EDARQ9UNE0 448 aa6.45□□□□□ -1.38
VPS50-213ENST00000477572 NOC2LQ9Y3T9 749 aaKnown RBP6.45□□□□□ -1.38
VPS50-213ENST00000477572 MTSS1O43312 755 aa6.44□□□□□ -1.38
VPS50-213ENST00000477572 HOXA3O43365 443 aaPredicted RBP6.44□□□□□ -1.38
VPS50-213ENST00000477572 IPO13O94829 963 aaKnown RBP6.44□□□□□ -1.38
VPS50-213ENST00000477572 LPLP06858 475 aa6.44□□□□□ -1.38
VPS50-213ENST00000477572 MAKP20794 623 aa6.44□□□□□ -1.38
VPS50-213ENST00000477572 XPAP23025 273 aaPredicted RBP6.44□□□□□ -1.38
VPS50-213ENST00000477572 GYS2P54840 703 aa6.44□□□□□ -1.38
VPS50-213ENST00000477572 MANFP55145 182 aaKnown RBP6.44□□□□□ -1.38
VPS50-213ENST00000477572 TRIM25Q14258 630 aaKnown RBP6.44□□□□□ -1.38
VPS50-213ENST00000477572 CRB2Q5IJ48 1285 aa6.44□□□□□ -1.38
VPS50-213ENST00000477572 LMBR1LQ6UX01 489 aa6.44□□□□□ -1.38
VPS50-213ENST00000477572 ZNF662Q6ZS27 426 aa6.44□□□□□ -1.38
VPS50-213ENST00000477572 FRMD7Q6ZUT3 714 aa6.44□□□□□ -1.38
VPS50-213ENST00000477572 ZNF627Q7L945 461 aa6.44□□□□□ -1.38
VPS50-213ENST00000477572 LYSMD2Q8IV50 215 aa6.44□□□□□ -1.38
VPS50-213ENST00000477572 UNC5BQ8IZJ1 945 aa6.44□□□□□ -1.38
VPS50-213ENST00000477572 MDGA1Q8NFP4 955 aa6.44□□□□□ -1.38
VPS50-213ENST00000477572 CHFRQ96EP1 664 aa6.44□□□□□ -1.38
VPS50-213ENST00000477572 CPPED1Q9BRF8 314 aaPredicted RBP6.44□□□□□ -1.38
VPS50-213ENST00000477572 IKZF4Q9H2S9 585 aa6.44□□□□□ -1.38
VPS50-213ENST00000477572 NRDE2Q9H7Z3 1164 aa6.44□□□□□ -1.38
VPS50-213ENST00000477572 EVLQ9UI08 416 aaPredicted RBP6.44□□□□□ -1.38
VPS50-213ENST00000477572 GOLGA6L6A8MZA4 724 aa6.43□□□□□ -1.38
VPS50-213ENST00000477572 SEC24DO94855 1032 aaPredicted RBP6.43□□□□□ -1.38
VPS50-213ENST00000477572 CT83Q5H943 113 aa6.43□□□□□ -1.38
VPS50-213ENST00000477572 USP7Q93009 1102 aa6.43□□□□□ -1.38
VPS50-213ENST00000477572 SLITRK6Q9H5Y7 841 aa6.43□□□□□ -1.38
VPS50-213ENST00000477572 GPRC5BQ9NZH0 403 aa6.43□□□□□ -1.38
VPS50-213ENST00000477572 PRSS50Q9UI38 385 aa6.43□□□□□ -1.38
VPS50-213ENST00000477572 NEMP1O14524 444 aa6.42□□□□□ -1.38
VPS50-213ENST00000477572 PRAMEF4O60810 478 aa6.42□□□□□ -1.38
VPS50-213ENST00000477572 CANXP27824 592 aaKnown RBP6.42□□□□□ -1.38
VPS50-213ENST00000477572 DUSP2Q05923 314 aa6.42□□□□□ -1.38
VPS50-213ENST00000477572 STRN3Q13033 797 aa6.42□□□□□ -1.38
VPS50-213ENST00000477572 PDCD1Q15116 288 aa6.42□□□□□ -1.38
VPS50-213ENST00000477572 UBE3CQ15386 1083 aa6.42□□□□□ -1.38
VPS50-213ENST00000477572 RABL3Q5HYI8 236 aa6.42□□□□□ -1.38
VPS50-213ENST00000477572 PITRM1Q5JRX3 1037 aa6.42□□□□□ -1.38
VPS50-213ENST00000477572 TAS1R1Q7RTX1 841 aa6.42□□□□□ -1.38
VPS50-213ENST00000477572 HDGFL2Q7Z4V5 671 aaPredicted RBP6.42□□□□□ -1.38
VPS50-213ENST00000477572 XYLT1Q86Y38 959 aa6.42□□□□□ -1.38
VPS50-213ENST00000477572 CPT1CQ8TCG5 803 aa6.42□□□□□ -1.38
VPS50-213ENST00000477572 CPEB1Q9BZB8 566 aaKnown RBP6.42□□□□□ -1.38
VPS50-213ENST00000477572 ENKD1Q9H0I2 346 aa6.42□□□□□ -1.38
VPS50-213ENST00000477572 TOPORSQ9NS56 1045 aaPredicted RBP6.42□□□□□ -1.38
VPS50-213ENST00000477572 KCNG1Q9UIX4 513 aa6.42□□□□□ -1.38
VPS50-213ENST00000477572 SORCS3Q9UPU3 1222 aa6.42□□□□□ -1.38
VPS50-213ENST00000477572 TBX22Q9Y458 520 aa6.42□□□□□ -1.38
VPS50-213ENST00000477572 NUMBLQ9Y6R0 609 aa6.42□□□□□ -1.38
VPS50-213ENST00000477572 A0A1W2PR48 441 aa6.41□□□□□ -1.38
VPS50-213ENST00000477572 ENPP3O14638 875 aa6.41□□□□□ -1.38
VPS50-213ENST00000477572 NRP1O14786 923 aa6.41□□□□□ -1.38
VPS50-213ENST00000477572 NRP2O60462 931 aa6.41□□□□□ -1.38
VPS50-213ENST00000477572 LGALS4P56470 323 aa6.41□□□□□ -1.38
VPS50-213ENST00000477572 NRG3P56975 720 aa6.41□□□□□ -1.38
VPS50-213ENST00000477572 APBB1IPQ7Z5R6 666 aaPredicted RBP6.41□□□□□ -1.38
VPS50-213ENST00000477572 STRA8Q7Z7C7 330 aa6.41□□□□□ -1.38
VPS50-213ENST00000477572 ZNF276Q8N554 614 aa6.41□□□□□ -1.38
VPS50-213ENST00000477572 IL17RAQ96F46 866 aa6.41□□□□□ -1.38
VPS50-213ENST00000477572 KCTD10Q9H3F6 313 aa6.41□□□□□ -1.38
VPS50-213ENST00000477572 TRPS1Q9UHF7 1281 aa6.41□□□□□ -1.38
VPS50-213ENST00000477572 DNAJC6O75061 913 aa6.4□□□□□ -1.38
VPS50-213ENST00000477572 SCAF4O95104 1147 aaKnown RBP6.4□□□□□ -1.38
VPS50-213ENST00000477572 DPTQ07507 201 aa6.4□□□□□ -1.38
VPS50-213ENST00000477572 ABHD15Q6UXT9 468 aa6.4□□□□□ -1.38
VPS50-213ENST00000477572 NOP9Q86U38 636 aaKnown RBP6.4□□□□□ -1.38
VPS50-213ENST00000477572 RASSF3Q86WH2 238 aa6.4□□□□□ -1.38
VPS50-213ENST00000477572 GLB1L2Q8IW92 636 aa6.4□□□□□ -1.38
VPS50-213ENST00000477572 SLC25A43Q8WUT9 341 aaPredicted RBP6.4□□□□□ -1.38
VPS50-213ENST00000477572 EAF2Q96CJ1 260 aaPredicted RBP6.4□□□□□ -1.38
VPS50-213ENST00000477572 CEP89Q96ST8 783 aa6.4□□□□□ -1.38
VPS50-213ENST00000477572 LSM14BQ9BX40 385 aaKnown RBP6.4□□□□□ -1.38
VPS50-213ENST00000477572 MAPRE3Q9UPY8 281 aa6.4□□□□□ -1.38
VPS50-213ENST00000477572 HDAC5Q9UQL6 1122 aa6.4□□□□□ -1.38
VPS50-213ENST00000477572 GRXCR1A8MXD5 290 aa6.39□□□□□ -1.39
VPS50-213ENST00000477572 BPIP17213 487 aa6.39□□□□□ -1.39
VPS50-213ENST00000477572 GPR15P49685 360 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms