RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 GULP1Q9UBP9 304 aa6.33□□□□□ -1.4
VPS45-207ENST00000477558 ACSL6Q9UKU0 697 aa6.33□□□□□ -1.4
VPS45-207ENST00000477558 HDAC9Q9UKV0 1011 aa6.33□□□□□ -1.4
VPS45-207ENST00000477558 PCDHAC2Q9Y5I4 1007 aa6.33□□□□□ -1.4
VPS45-207ENST00000477558 TAF6LQ9Y6J9 622 aa6.33□□□□□ -1.4
VPS45-207ENST00000477558 ATRNL1Q5VV63 1379 aa6.32□□□□□ -1.4
VPS45-207ENST00000477558 TRBV23OR9-2A0A075B6M9 112 aa6.32□□□□□ -1.4
VPS45-207ENST00000477558 ZNF503-AS2A6NEH8 195 aa6.32□□□□□ -1.4
VPS45-207ENST00000477558 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.32□□□□□ -1.4
VPS45-207ENST00000477558 ATP5JP18859 108 aa6.32□□□□□ -1.4
VPS45-207ENST00000477558 CHAF1AQ13111 956 aaPredicted RBP6.32□□□□□ -1.4
VPS45-207ENST00000477558 SNX17Q15036 470 aa6.32□□□□□ -1.4
VPS45-207ENST00000477558 CFAP100Q494V2 611 aa6.32□□□□□ -1.4
VPS45-207ENST00000477558 E4F1Q66K89 784 aaPredicted RBP6.32□□□□□ -1.4
VPS45-207ENST00000477558 KCNT2Q6UVM3 1135 aa6.32□□□□□ -1.4
VPS45-207ENST00000477558 NSUN4Q96CB9 384 aaKnown RBP6.32□□□□□ -1.4
VPS45-207ENST00000477558 GCC1Q96CN9 775 aa6.32□□□□□ -1.4
VPS45-207ENST00000477558 PRMT6Q96LA8 375 aaPredicted RBP6.32□□□□□ -1.4
VPS45-207ENST00000477558 NEUROD6Q96NK8 337 aa6.32□□□□□ -1.4
VPS45-207ENST00000477558 GLIS2Q9BZE0 524 aaPredicted RBP6.32□□□□□ -1.4
VPS45-207ENST00000477558 CCDC8Q9H0W5 538 aaPredicted RBP6.32□□□□□ -1.4
VPS45-207ENST00000477558 FBLN5Q9UBX5 448 aa6.32□□□□□ -1.4
VPS45-207ENST00000477558 MRPS23Q9Y3D9 190 aaKnown RBP6.32□□□□□ -1.4
VPS45-207ENST00000477558 RWDD3Q9Y3V2 267 aa6.32□□□□□ -1.4
VPS45-207ENST00000477558 PPP2R3BQ9Y5P8 575 aa6.32□□□□□ -1.4
VPS45-207ENST00000477558 MRPL42Q9Y6G3 142 aaKnown RBP6.32□□□□□ -1.4
VPS45-207ENST00000477558 CNTNAP1P78357 1384 aa6.31□□□□□ -1.4
VPS45-207ENST00000477558 MROH7-TTC4A0A0A0MT08 1334 aa6.31□□□□□ -1.4
VPS45-207ENST00000477558 NAV1Q8NEY1 1877 aa6.31□□□□□ -1.4
VPS45-207ENST00000477558 A0A1W2PQ27 194 aa6.31□□□□□ -1.4
VPS45-207ENST00000477558 A0A1W2PQ64 194 aa6.31□□□□□ -1.4
VPS45-207ENST00000477558 A0A1W2PQC6 194 aa6.31□□□□□ -1.4
VPS45-207ENST00000477558 A0A1W2PQD8 194 aa6.31□□□□□ -1.4
VPS45-207ENST00000477558 ESYT3A0FGR9 886 aa6.31□□□□□ -1.4
VPS45-207ENST00000477558 ADM5C9JUS6 153 aa6.31□□□□□ -1.4
VPS45-207ENST00000477558 TRAF5O00463 557 aa6.31□□□□□ -1.4
VPS45-207ENST00000477558 MSCO60682 206 aa6.31□□□□□ -1.4
VPS45-207ENST00000477558 GLI1P08151 1106 aa6.31□□□□□ -1.4
VPS45-207ENST00000477558 TACR1P25103 407 aa6.31□□□□□ -1.4
VPS45-207ENST00000477558 RHBDL3P58872 404 aa6.31□□□□□ -1.4
VPS45-207ENST00000477558 JAG1P78504 1218 aa6.31□□□□□ -1.4
VPS45-207ENST00000477558 CYP4F8P98187 520 aa6.31□□□□□ -1.4
VPS45-207ENST00000477558 DLGAP5Q15398 846 aa6.31□□□□□ -1.4
VPS45-207ENST00000477558 CCDC158Q5M9N0 1113 aa6.31□□□□□ -1.4
VPS45-207ENST00000477558 ACBD5Q5T8D3 534 aaPredicted RBP6.31□□□□□ -1.4
VPS45-207ENST00000477558 CST9Q5W186 159 aa6.31□□□□□ -1.4
VPS45-207ENST00000477558 IQCEQ6IPM2 695 aa6.31□□□□□ -1.4
VPS45-207ENST00000477558 KRT26Q7Z3Y9 468 aa6.31□□□□□ -1.4
VPS45-207ENST00000477558 NOP9Q86U38 636 aaKnown RBP6.31□□□□□ -1.4
VPS45-207ENST00000477558 APOBEC3FQ8IUX4 373 aaKnown RBP6.31□□□□□ -1.4
VPS45-207ENST00000477558 TEKT1Q969V4 418 aa6.31□□□□□ -1.4
VPS45-207ENST00000477558 LIN37Q96GY3 246 aaPredicted RBP6.31□□□□□ -1.4
VPS45-207ENST00000477558 TEPSINQ96N21 525 aa6.31□□□□□ -1.4
VPS45-207ENST00000477558 IPO9Q96P70 1041 aaKnown RBP6.31□□□□□ -1.4
VPS45-207ENST00000477558 PIH1D3Q9NQM4 214 aaKnown RBP6.31□□□□□ -1.4
VPS45-207ENST00000477558 FBXL7Q9UJT9 491 aa6.31□□□□□ -1.4
VPS45-207ENST00000477558 YBX2Q9Y2T7 364 aaKnown RBP6.31□□□□□ -1.4
VPS45-207ENST00000477558 NPFFR2Q9Y5X5 522 aa6.31□□□□□ -1.4
VPS45-207ENST00000477558 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.31□□□□□ -1.4
VPS45-207ENST00000477558 TTC41PQ6P2S7 1318 aa6.3□□□□□ -1.4
VPS45-207ENST00000477558 HTTP42858 3142 aa6.3□□□□□ -1.4
VPS45-207ENST00000477558 AK9Q5TCS8 1911 aa6.3□□□□□ -1.4
VPS45-207ENST00000477558 GPR75-ASB3A0A0A6YYF3 556 aa6.3□□□□□ -1.4
VPS45-207ENST00000477558 TCRBV5S4A2TA0A5A2 114 aa6.3□□□□□ -1.4
VPS45-207ENST00000477558 RASSF10A6NK89 507 aa6.3□□□□□ -1.4
VPS45-207ENST00000477558 SMARCA5O60264 1052 aaPredicted RBP6.3□□□□□ -1.4
VPS45-207ENST00000477558 NPHS1O60500 1241 aa6.3□□□□□ -1.4
VPS45-207ENST00000477558 FRAT2O75474 233 aaPredicted RBP6.3□□□□□ -1.4
VPS45-207ENST00000477558 MAP4K4O95819 1239 aaPredicted RBP6.3□□□□□ -1.4
VPS45-207ENST00000477558 IGHDP01880 384 aa6.3□□□□□ -1.4
VPS45-207ENST00000477558 C6orf222P0C671 652 aaPredicted RBP6.3□□□□□ -1.4
VPS45-207ENST00000477558 PNLIPP16233 465 aa6.3□□□□□ -1.4
VPS45-207ENST00000477558 LTBRP36941 435 aa6.3□□□□□ -1.4
VPS45-207ENST00000477558 MECOMQ03112 1051 aa6.3□□□□□ -1.4
VPS45-207ENST00000477558 TESK1Q15569 626 aa6.3□□□□□ -1.4
VPS45-207ENST00000477558 TTC39AQ5SRH9 613 aa6.3□□□□□ -1.4
VPS45-207ENST00000477558 ADGRA1Q86SQ6 560 aa6.3□□□□□ -1.4
VPS45-207ENST00000477558 FAM83AQ86UY5 434 aa6.3□□□□□ -1.4
VPS45-207ENST00000477558 DNAJC5GQ8N7S2 189 aa6.3□□□□□ -1.4
VPS45-207ENST00000477558 ZSWIM2Q8NEG5 633 aa6.3□□□□□ -1.4
VPS45-207ENST00000477558 CDCA5Q96FF9 252 aa6.3□□□□□ -1.4
VPS45-207ENST00000477558 IDI2Q9BXS1 227 aa6.3□□□□□ -1.4
VPS45-207ENST00000477558 KCNK12Q9HB15 430 aa6.3□□□□□ -1.4
VPS45-207ENST00000477558 PDLIM7Q9NR12 457 aa6.3□□□□□ -1.4
VPS45-207ENST00000477558 ECHDC1Q9NTX5 307 aa6.3□□□□□ -1.4
VPS45-207ENST00000477558 ZNF70Q9UC06 446 aaPredicted RBP6.3□□□□□ -1.4
VPS45-207ENST00000477558 STAP2Q9UGK3 403 aa6.3□□□□□ -1.4
VPS45-207ENST00000477558 TRAF6Q9Y4K3 522 aa6.3□□□□□ -1.4
VPS45-207ENST00000477558 PCDHA2Q9Y5H9 948 aa6.3□□□□□ -1.4
VPS45-207ENST00000477558 PHIPQ8WWQ0 1821 aa6.29□□□□□ -1.4
VPS45-207ENST00000477558 PTPRFP10586 1907 aa6.29□□□□□ -1.4
VPS45-207ENST00000477558 MYH1P12882 1939 aa6.29□□□□□ -1.4
VPS45-207ENST00000477558 DOCK1Q14185 1865 aa6.29□□□□□ -1.4
VPS45-207ENST00000477558 F8W031 263 aaPredicted RBP6.29□□□□□ -1.4
VPS45-207ENST00000477558 WDHD1O75717 1129 aaPredicted RBP6.29□□□□□ -1.4
VPS45-207ENST00000477558 FUCA1P04066 466 aa6.29□□□□□ -1.4
VPS45-207ENST00000477558 IFIT2P09913 472 aaKnown RBP6.29□□□□□ -1.4
VPS45-207ENST00000477558 BCL6P41182 706 aa6.29□□□□□ -1.4
VPS45-207ENST00000477558 SUMO1P63165 101 aaKnown RBP6.29□□□□□ -1.4
VPS45-207ENST00000477558 FKBP1BP68106 108 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms