RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 PCDHA5Q9Y5H7 936 aa24.41■■□□□ 1.5
MCF2L2-209ENST00000475664 ACKR2O00590 384 aa24.4■■□□□ 1.5
MCF2L2-209ENST00000475664 ERLIN2O94905 339 aa24.4■■□□□ 1.5
MCF2L2-209ENST00000475664 CASP5P51878 434 aa24.4■■□□□ 1.5
MCF2L2-209ENST00000475664 GTF2BQ00403 316 aa24.4■■□□□ 1.5
MCF2L2-209ENST00000475664 DSC3Q14574 896 aa24.4■■□□□ 1.5
MCF2L2-209ENST00000475664 TMEM240Q5SV17 173 aa24.4■■□□□ 1.5
MCF2L2-209ENST00000475664 CNTNAP2Q9UHC6 1331 aa24.39■■□□□ 1.5
MCF2L2-209ENST00000475664 B4GALT5O43286 388 aa24.39■■□□□ 1.49
MCF2L2-209ENST00000475664 RHOBTB3O94955 611 aa24.39■■□□□ 1.49
MCF2L2-209ENST00000475664 SMC2O95347 1197 aa24.39■■□□□ 1.49
MCF2L2-209ENST00000475664 GCNT3O95395 438 aa24.39■■□□□ 1.49
MCF2L2-209ENST00000475664 PTMSP20962 102 aa24.39■■□□□ 1.49
MCF2L2-209ENST00000475664 ABCD1P33897 745 aa24.39■■□□□ 1.49
MCF2L2-209ENST00000475664 SARSP49591 514 aaKnown RBP24.39■■□□□ 1.49
MCF2L2-209ENST00000475664 CAMK4Q16566 473 aa24.39■■□□□ 1.49
MCF2L2-209ENST00000475664 ZC2HC1CQ53FD0 456 aaPredicted RBP24.39■■□□□ 1.49
MCF2L2-209ENST00000475664 ZNF365Q70YC5 407 aa24.39■■□□□ 1.49
MCF2L2-209ENST00000475664 GLIS3Q8NEA6 775 aa24.39■■□□□ 1.49
MCF2L2-209ENST00000475664 LINC01599Q8WXQ3 324 aa24.39■■□□□ 1.49
MCF2L2-209ENST00000475664 SMARCE1Q969G3 411 aa24.39■■□□□ 1.49
MCF2L2-209ENST00000475664 CCDC47Q96A33 483 aaKnown RBP24.39■■□□□ 1.49
MCF2L2-209ENST00000475664 HVCN1Q96D96 273 aa24.39■■□□□ 1.49
MCF2L2-209ENST00000475664 GSDMAQ96QA5 445 aa24.39■■□□□ 1.49
MCF2L2-209ENST00000475664 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.39■■□□□ 1.49
MCF2L2-209ENST00000475664 FTHL17Q9BXU8 183 aa24.39■■□□□ 1.49
MCF2L2-209ENST00000475664 NUP62CLQ9H1M0 184 aa24.39■■□□□ 1.49
MCF2L2-209ENST00000475664 TBX20Q9UMR3 447 aa24.39■■□□□ 1.49
MCF2L2-209ENST00000475664 TTLL13PA6NNM8 815 aa24.38■■□□□ 1.49
MCF2L2-209ENST00000475664 MGEA5O60502 916 aa24.38■■□□□ 1.49
MCF2L2-209ENST00000475664 FGBP02675 491 aa24.38■■□□□ 1.49
MCF2L2-209ENST00000475664 MYBP10242 640 aa24.38■■□□□ 1.49
MCF2L2-209ENST00000475664 ACTN1P12814 892 aa24.38■■□□□ 1.49
MCF2L2-209ENST00000475664 ARF4P18085 180 aaPredicted RBP24.38■■□□□ 1.49
MCF2L2-209ENST00000475664 AXLP30530 894 aa24.38■■□□□ 1.49
MCF2L2-209ENST00000475664 HOXA11P31270 313 aaPredicted RBP24.38■■□□□ 1.49
MCF2L2-209ENST00000475664 PSMD2Q13200 908 aa24.38■■□□□ 1.49
MCF2L2-209ENST00000475664 PRPF4BQ13523 1007 aaKnown RBP24.38■■□□□ 1.49
MCF2L2-209ENST00000475664 ALCAMQ13740 583 aa24.38■■□□□ 1.49
MCF2L2-209ENST00000475664 NT5DC1Q5TFE4 455 aa24.38■■□□□ 1.49
MCF2L2-209ENST00000475664 EPM2AIP1Q7L775 607 aaPredicted RBP24.38■■□□□ 1.49
MCF2L2-209ENST00000475664 CHST12Q9NRB3 414 aa24.38■■□□□ 1.49
MCF2L2-209ENST00000475664 PIN4Q9Y237 131 aaKnown RBP24.38■■□□□ 1.49
MCF2L2-209ENST00000475664 USP20Q9Y2K6 914 aa24.38■■□□□ 1.49
MCF2L2-209ENST00000475664 ABHD14A-ACY1A0A1B0GW23 586 aa24.37■■□□□ 1.49
MCF2L2-209ENST00000475664 BAIAP3O94812 1187 aa24.37■■□□□ 1.49
MCF2L2-209ENST00000475664 STRN3Q13033 797 aa24.37■■□□□ 1.49
MCF2L2-209ENST00000475664 STK4Q13043 487 aa24.37■■□□□ 1.49
MCF2L2-209ENST00000475664 IKBKEQ14164 716 aa24.37■■□□□ 1.49
MCF2L2-209ENST00000475664 RTN4RL1Q86UN2 441 aaPredicted RBP24.37■■□□□ 1.49
MCF2L2-209ENST00000475664 MAP4K3Q8IVH8 894 aa24.37■■□□□ 1.49
MCF2L2-209ENST00000475664 KIAA0895Q8NCT3 520 aa24.37■■□□□ 1.49
MCF2L2-209ENST00000475664 SLC39A2Q9NP94 309 aa24.37■■□□□ 1.49
MCF2L2-209ENST00000475664 RMND1Q9NWS8 449 aa24.37■■□□□ 1.49
MCF2L2-209ENST00000475664 PCDHB13Q9Y5F0 798 aa24.37■■□□□ 1.49
MCF2L2-209ENST00000475664 PTPRSQ13332 1948 aa24.36■■□□□ 1.49
MCF2L2-209ENST00000475664 NCBP1Q09161 790 aaKnown RBP24.36■■□□□ 1.49
MCF2L2-209ENST00000475664 L1TD1Q5T7N2 865 aaKnown RBP24.36■■□□□ 1.49
MCF2L2-209ENST00000475664 STXBP4Q6ZWJ1 553 aa24.36■■□□□ 1.49
MCF2L2-209ENST00000475664 OTOP2Q7RTS6 562 aa24.36■■□□□ 1.49
MCF2L2-209ENST00000475664 CPB2Q96IY4 423 aa24.36■■□□□ 1.49
MCF2L2-209ENST00000475664 ADAM2Q99965 735 aa24.36■■□□□ 1.49
MCF2L2-209ENST00000475664 MRPL4Q9BYD3 311 aaKnown RBP24.36■■□□□ 1.49
MCF2L2-209ENST00000475664 TSPYL2Q9H2G4 693 aaPredicted RBP24.36■■□□□ 1.49
MCF2L2-209ENST00000475664 A0A1B0GUA9 196 aa24.35■■□□□ 1.49
MCF2L2-209ENST00000475664 EIF3DO15371 548 aaKnown RBP eCLIP24.35■■□□□ 1.49
MCF2L2-209ENST00000475664 EFCAB14O75071 495 aa24.35■■□□□ 1.49
MCF2L2-209ENST00000475664 PIGRP01833 764 aa24.35■■□□□ 1.49
MCF2L2-209ENST00000475664 ZSCAN20P17040 1043 aaPredicted RBP24.35■■□□□ 1.49
MCF2L2-209ENST00000475664 KCNA1Q09470 495 aa24.35■■□□□ 1.49
MCF2L2-209ENST00000475664 NOTUMQ6P988 496 aa24.35■■□□□ 1.49
MCF2L2-209ENST00000475664 HERVK_113Q902F9 699 aa24.35■■□□□ 1.49
MCF2L2-209ENST00000475664 CCDC51Q96ER9 411 aa24.35■■□□□ 1.49
MCF2L2-209ENST00000475664 ACO2Q99798 780 aaKnown RBP24.35■■□□□ 1.49
MCF2L2-209ENST00000475664 TARS2Q9BW92 718 aaKnown RBP24.35■■□□□ 1.49
MCF2L2-209ENST00000475664 UBE2OQ9C0C9 1292 aaKnown RBP24.35■■□□□ 1.49
MCF2L2-209ENST00000475664 RGS18Q9NS28 235 aa24.35■■□□□ 1.49
MCF2L2-209ENST00000475664 KIAA1468Q9P260 1216 aa24.35■■□□□ 1.49
MCF2L2-209ENST00000475664 MAN1B1Q9UKM7 699 aa24.35■■□□□ 1.49
MCF2L2-209ENST00000475664 UBE4BO95155 1302 aa24.35■■□□□ 1.49
MCF2L2-209ENST00000475664 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24.34■■□□□ 1.49
MCF2L2-209ENST00000475664 ENPP3O14638 875 aa24.34■■□□□ 1.49
MCF2L2-209ENST00000475664 PRPF6O94906 941 aaKnown RBP24.34■■□□□ 1.49
MCF2L2-209ENST00000475664 BMP8BP34820 402 aa24.34■■□□□ 1.49
MCF2L2-209ENST00000475664 BMT2Q1RMZ1 405 aa24.34■■□□□ 1.49
MCF2L2-209ENST00000475664 ATF7IP2Q5U623 682 aa24.34■■□□□ 1.49
MCF2L2-209ENST00000475664 ZPBP2Q6X784 338 aa24.34■■□□□ 1.49
MCF2L2-209ENST00000475664 ZNF507Q8TCN5 953 aa24.34■■□□□ 1.49
MCF2L2-209ENST00000475664 SCFD1Q8WVM8 642 aa24.34■■□□□ 1.49
MCF2L2-209ENST00000475664 TRAIPQ9BWF2 469 aa24.34■■□□□ 1.49
MCF2L2-209ENST00000475664 PDZD7Q9H5P4 517 aa24.34■■□□□ 1.49
MCF2L2-209ENST00000475664 TNFSF13BQ9Y275 285 aa24.34■■□□□ 1.49
MCF2L2-209ENST00000475664 TTC3P53804 2025 aa24.34■■□□□ 1.49
MCF2L2-209ENST00000475664 N4BP3O15049 544 aa24.33■■□□□ 1.49
MCF2L2-209ENST00000475664 HOXD13P35453 343 aa24.33■■□□□ 1.49
MCF2L2-209ENST00000475664 NFKBIBQ15653 356 aa24.33■■□□□ 1.49
MCF2L2-209ENST00000475664 KLHL40Q2TBA0 621 aa24.33■■□□□ 1.49
MCF2L2-209ENST00000475664 C9orf50Q5SZB4 431 aa24.33■■□□□ 1.49
MCF2L2-209ENST00000475664 UBXN11Q5T124 520 aa24.33■■□□□ 1.49
MCF2L2-209ENST00000475664 RASIP1Q5U651 963 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms