RNA–Protein interactions for RNA: ENST00000475524.1

MCF2L-224, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-224ENST00000475524 CDHR5Q9HBB8 845 aa16.65■□□□□ 0.26
MCF2L-224ENST00000475524 GDAQ9Y2T3 454 aa16.65■□□□□ 0.26
MCF2L-224ENST00000475524 BIN1O00499 593 aa16.64■□□□□ 0.25
MCF2L-224ENST00000475524 RPS6KA5O75582 802 aa16.64■□□□□ 0.25
MCF2L-224ENST00000475524 CXCL10P02778 98 aa16.64■□□□□ 0.25
MCF2L-224ENST00000475524 PFKMP08237 780 aa16.64■□□□□ 0.25
MCF2L-224ENST00000475524 PRCPP42785 496 aa16.64■□□□□ 0.25
MCF2L-224ENST00000475524 HSP90AA2PQ14568 343 aaPredicted RBP16.64■□□□□ 0.25
MCF2L-224ENST00000475524 NFIL3Q16649 462 aa16.64■□□□□ 0.25
MCF2L-224ENST00000475524 AMHR2Q16671 573 aa16.64■□□□□ 0.25
MCF2L-224ENST00000475524 TMEM40Q8WWA1 233 aa16.64■□□□□ 0.25
MCF2L-224ENST00000475524 APBB2Q92870 758 aa16.64■□□□□ 0.25
MCF2L-224ENST00000475524 FGFBP2Q9BYJ0 223 aa16.64■□□□□ 0.25
MCF2L-224ENST00000475524 WNT8AQ9H1J5 351 aa16.64■□□□□ 0.25
MCF2L-224ENST00000475524 MINDY3Q9H8M7 445 aa16.64■□□□□ 0.25
MCF2L-224ENST00000475524 ERVK-5Q9HDB9 667 aa16.64■□□□□ 0.25
MCF2L-224ENST00000475524 CHST12Q9NRB3 414 aa16.64■□□□□ 0.25
MCF2L-224ENST00000475524 AGPAT5Q9NUQ2 364 aa16.64■□□□□ 0.25
MCF2L-224ENST00000475524 PRKAG2Q9UGJ0 569 aa16.64■□□□□ 0.25
MCF2L-224ENST00000475524 GINS2Q9Y248 185 aa16.64■□□□□ 0.25
MCF2L-224ENST00000475524 BRCA2P51587 3418 aa16.63■□□□□ 0.25
MCF2L-224ENST00000475524 SYCE3A1L190 88 aa16.63■□□□□ 0.25
MCF2L-224ENST00000475524 PDXKO00764 312 aa16.63■□□□□ 0.25
MCF2L-224ENST00000475524 KIAA0391O15091 583 aaKnown RBP16.63■□□□□ 0.25
MCF2L-224ENST00000475524 RAG1P15918 1043 aa16.63■□□□□ 0.25
MCF2L-224ENST00000475524 ERCC5P28715 1186 aaPredicted RBP16.63■□□□□ 0.25
MCF2L-224ENST00000475524 ZNF445P59923 1031 aa16.63■□□□□ 0.25
MCF2L-224ENST00000475524 TYRO3Q06418 890 aa16.63■□□□□ 0.25
MCF2L-224ENST00000475524 PRPF4BQ13523 1007 aaKnown RBP16.63■□□□□ 0.25
MCF2L-224ENST00000475524 MYBPC2Q14324 1141 aa16.63■□□□□ 0.25
MCF2L-224ENST00000475524 LPIN1Q14693 890 aa16.63■□□□□ 0.25
MCF2L-224ENST00000475524 ZC2HC1CQ53FD0 456 aaPredicted RBP16.63■□□□□ 0.25
MCF2L-224ENST00000475524 CENPPQ6IPU0 288 aa16.63■□□□□ 0.25
MCF2L-224ENST00000475524 MFSD5Q6N075 450 aa16.63■□□□□ 0.25
MCF2L-224ENST00000475524 HS2ST1Q7LGA3 356 aa16.63■□□□□ 0.25
MCF2L-224ENST00000475524 CATSPER4Q7RTX7 472 aa16.63■□□□□ 0.25
MCF2L-224ENST00000475524 APBB1IPQ7Z5R6 666 aaPredicted RBP16.63■□□□□ 0.25
MCF2L-224ENST00000475524 FAM228AQ86W67 206 aa16.63■□□□□ 0.25
MCF2L-224ENST00000475524 C12orf56Q8IXR9 622 aa16.63■□□□□ 0.25
MCF2L-224ENST00000475524 GLIS3Q8NEA6 775 aa16.63■□□□□ 0.25
MCF2L-224ENST00000475524 PPP1R16BQ96T49 567 aa16.63■□□□□ 0.25
MCF2L-224ENST00000475524 TRAIPQ9BWF2 469 aa16.63■□□□□ 0.25
MCF2L-224ENST00000475524 FTHL17Q9BXU8 183 aa16.63■□□□□ 0.25
MCF2L-224ENST00000475524 GBP3Q9H0R5 595 aa16.63■□□□□ 0.25
MCF2L-224ENST00000475524 TYW1Q9NV66 732 aaKnown RBP16.63■□□□□ 0.25
MCF2L-224ENST00000475524 TRAF3IP3Q9Y228 551 aa16.63■□□□□ 0.25
MCF2L-224ENST00000475524 TNFSF13BQ9Y275 285 aa16.63■□□□□ 0.25
MCF2L-224ENST00000475524 NOC2LQ9Y3T9 749 aaKnown RBP16.63■□□□□ 0.25
MCF2L-224ENST00000475524 STYXL1Q9Y6J8 313 aa16.63■□□□□ 0.25
MCF2L-224ENST00000475524 ZMYM2Q9UBW7 1377 aa16.63■□□□□ 0.25
MCF2L-224ENST00000475524 BICDL2A1A5D9 508 aa16.62■□□□□ 0.25
MCF2L-224ENST00000475524 TRIM43BA6NCK2 446 aa16.62■□□□□ 0.25
MCF2L-224ENST00000475524 PPP1R3GB7ZBB8 358 aa16.62■□□□□ 0.25
MCF2L-224ENST00000475524 HNRNPDLO14979 420 aaKnown RBP16.62■□□□□ 0.25
MCF2L-224ENST00000475524 N4BP3O15049 544 aa16.62■□□□□ 0.25
MCF2L-224ENST00000475524 EVI5O60447 810 aa16.62■□□□□ 0.25
MCF2L-224ENST00000475524 TSPAN1O60635 241 aa16.62■□□□□ 0.25
MCF2L-224ENST00000475524 TOM1L1O75674 476 aa16.62■□□□□ 0.25
MCF2L-224ENST00000475524 PRPF6O94906 941 aaKnown RBP16.62■□□□□ 0.25
MCF2L-224ENST00000475524 CCNE1P24864 410 aa16.62■□□□□ 0.25
MCF2L-224ENST00000475524 HOXD13P35453 343 aa16.62■□□□□ 0.25
MCF2L-224ENST00000475524 LRRC63Q05C16 580 aa16.62■□□□□ 0.25
MCF2L-224ENST00000475524 PAK2Q13177 524 aa16.62■□□□□ 0.25
MCF2L-224ENST00000475524 MBTPS1Q14703 1052 aa16.62■□□□□ 0.25
MCF2L-224ENST00000475524 EDRF1Q3B7T1 1238 aa16.62■□□□□ 0.25
MCF2L-224ENST00000475524 DPCR1Q3MIW9 517 aa16.62■□□□□ 0.25
MCF2L-224ENST00000475524 PLEKHG4Q58EX7 1191 aa16.62■□□□□ 0.25
MCF2L-224ENST00000475524 SLFN12LQ6IEE8 588 aa16.62■□□□□ 0.25
MCF2L-224ENST00000475524 NOTUMQ6P988 496 aa16.62■□□□□ 0.25
MCF2L-224ENST00000475524 SYCP3Q8IZU3 236 aa16.62■□□□□ 0.25
MCF2L-224ENST00000475524 TMEM199Q8N511 208 aa16.62■□□□□ 0.25
MCF2L-224ENST00000475524 TRIM43Q96BQ3 446 aaPredicted RBP16.62■□□□□ 0.25
MCF2L-224ENST00000475524 ZNF668Q96K58 619 aaPredicted RBP16.62■□□□□ 0.25
MCF2L-224ENST00000475524 ACO2Q99798 780 aaKnown RBP16.62■□□□□ 0.25
MCF2L-224ENST00000475524 KCTD10Q9H3F6 313 aa16.62■□□□□ 0.25
MCF2L-224ENST00000475524 UMODL1Q5DID0 1318 aa16.62■□□□□ 0.25
MCF2L-224ENST00000475524 SCN5AQ14524 2016 aa16.62■□□□□ 0.25
MCF2L-224ENST00000475524 A0A1B0GUA9 196 aa16.61■□□□□ 0.25
MCF2L-224ENST00000475524 GHRP10912 638 aa16.61■□□□□ 0.25
MCF2L-224ENST00000475524 ARF4P18085 180 aaPredicted RBP16.61■□□□□ 0.25
MCF2L-224ENST00000475524 GARTP22102 1010 aa16.61■□□□□ 0.25
MCF2L-224ENST00000475524 PROZP22891 400 aa16.61■□□□□ 0.25
MCF2L-224ENST00000475524 CYP2C18P33260 490 aa16.61■□□□□ 0.25
MCF2L-224ENST00000475524 LIG4P49917 911 aa16.61■□□□□ 0.25
MCF2L-224ENST00000475524 PAK1Q13153 545 aa16.61■□□□□ 0.25
MCF2L-224ENST00000475524 ZCWPW2Q504Y3 356 aa16.61■□□□□ 0.25
MCF2L-224ENST00000475524 ATF7IP2Q5U623 682 aa16.61■□□□□ 0.25
MCF2L-224ENST00000475524 ISM2Q6H9L7 571 aa16.61■□□□□ 0.25
MCF2L-224ENST00000475524 SLC9A9Q8IVB4 645 aa16.61■□□□□ 0.25
MCF2L-224ENST00000475524 SMYD4Q8IYR2 804 aaPredicted RBP16.61■□□□□ 0.25
MCF2L-224ENST00000475524 P2RX5Q93086 422 aa16.61■□□□□ 0.25
MCF2L-224ENST00000475524 BICD1Q96G01 975 aa16.61■□□□□ 0.25
MCF2L-224ENST00000475524 IFIH1Q9BYX4 1025 aaKnown RBP16.61■□□□□ 0.25
MCF2L-224ENST00000475524 PPP1R12CQ9BZL4 782 aa16.61■□□□□ 0.25
MCF2L-224ENST00000475524 NAT10Q9H0A0 1025 aaKnown RBP16.61■□□□□ 0.25
MCF2L-224ENST00000475524 AGO3Q9H9G7 860 aaKnown RBP16.61■□□□□ 0.25
MCF2L-224ENST00000475524 PRDM5Q9NQX1 630 aaPredicted RBP16.61■□□□□ 0.25
MCF2L-224ENST00000475524 RWDD2AQ9UIY3 292 aa16.61■□□□□ 0.25
MCF2L-224ENST00000475524 PADI3Q9ULW8 664 aa16.61■□□□□ 0.25
MCF2L-224ENST00000475524 ST3GAL5Q9UNP4 418 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms