RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 NRP1O14786 923 aa6.53□□□□□ -1.36
LTN1-204ENST00000475344 NARSO43776 548 aaKnown RBP6.53□□□□□ -1.36
LTN1-204ENST00000475344 NRP2O60462 931 aa6.53□□□□□ -1.36
LTN1-204ENST00000475344 RPS6KA4O75676 772 aa6.53□□□□□ -1.36
LTN1-204ENST00000475344 IPO13O94829 963 aaKnown RBP6.53□□□□□ -1.36
LTN1-204ENST00000475344 HK1P19367 917 aa6.53□□□□□ -1.36
LTN1-204ENST00000475344 CASRP41180 1078 aa6.53□□□□□ -1.36
LTN1-204ENST00000475344 ID4P47928 161 aa6.53□□□□□ -1.36
LTN1-204ENST00000475344 MANFP55145 182 aaKnown RBP6.53□□□□□ -1.36
LTN1-204ENST00000475344 NRG3P56975 720 aa6.53□□□□□ -1.36
LTN1-204ENST00000475344 STRN3Q13033 797 aa6.53□□□□□ -1.36
LTN1-204ENST00000475344 ZNF662Q6ZS27 426 aa6.53□□□□□ -1.36
LTN1-204ENST00000475344 UNC5BQ8IZJ1 945 aa6.53□□□□□ -1.36
LTN1-204ENST00000475344 NEU4Q8WWR8 484 aaPredicted RBP6.53□□□□□ -1.36
LTN1-204ENST00000475344 FDXACB1Q9BRP7 624 aaPredicted RBP6.53□□□□□ -1.36
LTN1-204ENST00000475344 MMRN2Q9H8L6 949 aa6.53□□□□□ -1.36
LTN1-204ENST00000475344 SLC2A4RGQ9NR83 387 aa6.53□□□□□ -1.36
LTN1-204ENST00000475344 MAPRE3Q9UPY8 281 aa6.53□□□□□ -1.36
LTN1-204ENST00000475344 MTSS1O43312 755 aa6.52□□□□□ -1.37
LTN1-204ENST00000475344 FAM20BO75063 409 aa6.52□□□□□ -1.37
LTN1-204ENST00000475344 LPLP06858 475 aa6.52□□□□□ -1.37
LTN1-204ENST00000475344 PLEKHG4Q58EX7 1191 aa6.52□□□□□ -1.37
LTN1-204ENST00000475344 CT83Q5H943 113 aa6.52□□□□□ -1.37
LTN1-204ENST00000475344 MSL3Q8N5Y2 521 aaKnown RBP6.52□□□□□ -1.37
LTN1-204ENST00000475344 PPP1R14CQ8TAE6 165 aa6.52□□□□□ -1.37
LTN1-204ENST00000475344 ZNF483Q8TF39 744 aaPredicted RBP6.52□□□□□ -1.37
LTN1-204ENST00000475344 TLDC2A0PJX2 215 aa6.51□□□□□ -1.37
LTN1-204ENST00000475344 PRAMEF4O60810 478 aa6.51□□□□□ -1.37
LTN1-204ENST00000475344 SEC24DO94855 1032 aaPredicted RBP6.51□□□□□ -1.37
LTN1-204ENST00000475344 DUSP2Q05923 314 aa6.51□□□□□ -1.37
LTN1-204ENST00000475344 TRIM25Q14258 630 aaKnown RBP6.51□□□□□ -1.37
LTN1-204ENST00000475344 DDX46Q7L014 1031 aaKnown RBP6.51□□□□□ -1.37
LTN1-204ENST00000475344 RASSF3Q86WH2 238 aa6.51□□□□□ -1.37
LTN1-204ENST00000475344 GLB1L2Q8IW92 636 aa6.51□□□□□ -1.37
LTN1-204ENST00000475344 ST8SIA2Q92186 375 aa6.51□□□□□ -1.37
LTN1-204ENST00000475344 MNTQ99583 582 aa6.51□□□□□ -1.37
LTN1-204ENST00000475344 TTC1Q99614 292 aa6.51□□□□□ -1.37
LTN1-204ENST00000475344 CPPED1Q9BRF8 314 aaPredicted RBP6.51□□□□□ -1.37
LTN1-204ENST00000475344 ZNF703Q9H7S9 590 aaPredicted RBP6.51□□□□□ -1.37
LTN1-204ENST00000475344 EVLQ9UI08 416 aaPredicted RBP6.51□□□□□ -1.37
LTN1-204ENST00000475344 PRSS50Q9UI38 385 aa6.51□□□□□ -1.37
LTN1-204ENST00000475344 EDARQ9UNE0 448 aa6.51□□□□□ -1.37
LTN1-204ENST00000475344 TMA7Q9Y2S6 64 aaKnown RBP6.51□□□□□ -1.37
LTN1-204ENST00000475344 NUMBLQ9Y6R0 609 aa6.51□□□□□ -1.37
LTN1-204ENST00000475344 GOLGA6L6A8MZA4 724 aa6.5□□□□□ -1.37
LTN1-204ENST00000475344 NEMP1O14524 444 aa6.5□□□□□ -1.37
LTN1-204ENST00000475344 CFBP00751 764 aa6.5□□□□□ -1.37
LTN1-204ENST00000475344 ADH4P08319 380 aa6.5□□□□□ -1.37
LTN1-204ENST00000475344 GPR15P49685 360 aa6.5□□□□□ -1.37
LTN1-204ENST00000475344 RABGGTBP53611 331 aa6.5□□□□□ -1.37
LTN1-204ENST00000475344 GIMAP6Q6P9H5 292 aa6.5□□□□□ -1.37
LTN1-204ENST00000475344 THNSL2Q86YJ6 484 aa6.5□□□□□ -1.37
LTN1-204ENST00000475344 CLIP3Q96DZ5 547 aa6.5□□□□□ -1.37
LTN1-204ENST00000475344 PRDM12Q9H4Q4 367 aa6.5□□□□□ -1.37
LTN1-204ENST00000475344 IFT22Q9H7X7 185 aa6.5□□□□□ -1.37
LTN1-204ENST00000475344 TMPRSS11EQ9UL52 423 aa6.5□□□□□ -1.37
LTN1-204ENST00000475344 XDHP47989 1333 aa6.5□□□□□ -1.37
LTN1-204ENST00000475344 KLRG2A4D1S0 409 aaPredicted RBP6.49□□□□□ -1.37
LTN1-204ENST00000475344 HOXA3O43365 443 aaPredicted RBP6.49□□□□□ -1.37
LTN1-204ENST00000475344 BPIP17213 487 aa6.49□□□□□ -1.37
LTN1-204ENST00000475344 MAKP20794 623 aa6.49□□□□□ -1.37
LTN1-204ENST00000475344 LGALS4P56470 323 aa6.49□□□□□ -1.37
LTN1-204ENST00000475344 DHCR24Q15392 516 aa6.49□□□□□ -1.37
LTN1-204ENST00000475344 CT47A1Q5JQC4 288 aaPredicted RBP6.49□□□□□ -1.37
LTN1-204ENST00000475344 FNDC7Q5VTL7 733 aa6.49□□□□□ -1.37
LTN1-204ENST00000475344 TAS1R1Q7RTX1 841 aa6.49□□□□□ -1.37
LTN1-204ENST00000475344 STRA8Q7Z7C7 330 aa6.49□□□□□ -1.37
LTN1-204ENST00000475344 RNF180Q86T96 592 aa6.49□□□□□ -1.37
LTN1-204ENST00000475344 MDGA1Q8NFP4 955 aa6.49□□□□□ -1.37
LTN1-204ENST00000475344 OR14C36Q8NHC7 312 aa6.49□□□□□ -1.37
LTN1-204ENST00000475344 IL17RAQ96F46 866 aa6.49□□□□□ -1.37
LTN1-204ENST00000475344 TRIM8Q9BZR9 551 aa6.49□□□□□ -1.37
LTN1-204ENST00000475344 KCTD10Q9H3F6 313 aa6.49□□□□□ -1.37
LTN1-204ENST00000475344 TOPORSQ9NS56 1045 aaPredicted RBP6.49□□□□□ -1.37
LTN1-204ENST00000475344 HDAC5Q9UQL6 1122 aa6.49□□□□□ -1.37
LTN1-204ENST00000475344 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.48□□□□□ -1.37
LTN1-204ENST00000475344 CANXP27824 592 aaKnown RBP6.48□□□□□ -1.37
LTN1-204ENST00000475344 TGFB2P61812 414 aa6.48□□□□□ -1.37
LTN1-204ENST00000475344 SLC25A3Q00325 362 aa6.48□□□□□ -1.37
LTN1-204ENST00000475344 PDCD1Q15116 288 aa6.48□□□□□ -1.37
LTN1-204ENST00000475344 UBE3CQ15386 1083 aa6.48□□□□□ -1.37
LTN1-204ENST00000475344 CCDC178Q5BJE1 867 aa6.48□□□□□ -1.37
LTN1-204ENST00000475344 PITRM1Q5JRX3 1037 aa6.48□□□□□ -1.37
LTN1-204ENST00000475344 SDE2Q6IQ49 451 aa6.48□□□□□ -1.37
LTN1-204ENST00000475344 APBB1IPQ7Z5R6 666 aaPredicted RBP6.48□□□□□ -1.37
LTN1-204ENST00000475344 XYLT1Q86Y38 959 aa6.48□□□□□ -1.37
LTN1-204ENST00000475344 EAF2Q96CJ1 260 aaPredicted RBP6.48□□□□□ -1.37
LTN1-204ENST00000475344 A0A1W2PR48 441 aa6.47□□□□□ -1.37
LTN1-204ENST00000475344 ULK1O75385 1050 aa6.47□□□□□ -1.37
LTN1-204ENST00000475344 CCT2P78371 535 aaKnown RBP6.47□□□□□ -1.37
LTN1-204ENST00000475344 TOB2Q14106 344 aaPredicted RBP6.47□□□□□ -1.37
LTN1-204ENST00000475344 UGT8Q16880 541 aa6.47□□□□□ -1.37
LTN1-204ENST00000475344 C1QL3Q5VWW1 255 aa6.47□□□□□ -1.37
LTN1-204ENST00000475344 LYSMD2Q8IV50 215 aa6.47□□□□□ -1.37
LTN1-204ENST00000475344 CLRN3Q8NCR9 226 aa6.47□□□□□ -1.37
LTN1-204ENST00000475344 FAM193BQ96PV7 902 aaPredicted RBP6.47□□□□□ -1.37
LTN1-204ENST00000475344 WNT8AQ9H1J5 351 aa6.47□□□□□ -1.37
LTN1-204ENST00000475344 NRDE2Q9H7Z3 1164 aa6.47□□□□□ -1.37
LTN1-204ENST00000475344 SORCS3Q9UPU3 1222 aa6.47□□□□□ -1.37
LTN1-204ENST00000475344 CDY2AQ9Y6F7 541 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms