RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 TAS1R3Q7RTX0 852 aa17.35■□□□□ 0.37
COL1A1-204ENST00000474644 TMCO2Q7Z6W1 182 aaPredicted RBP17.35■□□□□ 0.37
COL1A1-204ENST00000474644 CNNM3Q8NE01 707 aa17.35■□□□□ 0.37
COL1A1-204ENST00000474644 PANK4Q9NVE7 773 aa17.35■□□□□ 0.37
COL1A1-204ENST00000474644 SEL1LQ9UBV2 794 aa17.35■□□□□ 0.37
COL1A1-204ENST00000474644 KCNG1Q9UIX4 513 aa17.35■□□□□ 0.37
COL1A1-204ENST00000474644 TTLL13PA6NNM8 815 aa17.34■□□□□ 0.37
COL1A1-204ENST00000474644 ACKR2O00590 384 aa17.34■□□□□ 0.37
COL1A1-204ENST00000474644 NR1I2O75469 434 aa17.34■□□□□ 0.37
COL1A1-204ENST00000474644 MAPTP10636 758 aaKnown RBP17.34■□□□□ 0.37
COL1A1-204ENST00000474644 ARF4P18085 180 aaPredicted RBP17.34■□□□□ 0.37
COL1A1-204ENST00000474644 HAUS6Q7Z4H7 955 aa17.34■□□□□ 0.37
COL1A1-204ENST00000474644 FAM178BQ8IXR5 827 aa17.34■□□□□ 0.37
COL1A1-204ENST00000474644 CCDC65Q8IXS2 484 aa17.34■□□□□ 0.37
COL1A1-204ENST00000474644 MYOCDQ8IZQ8 938 aa17.34■□□□□ 0.37
COL1A1-204ENST00000474644 PHOSPHO2Q8TCD6 241 aa17.34■□□□□ 0.37
COL1A1-204ENST00000474644 KCNN1Q92952 543 aa17.34■□□□□ 0.37
COL1A1-204ENST00000474644 CPB2Q96IY4 423 aa17.34■□□□□ 0.37
COL1A1-204ENST00000474644 TMEM134Q9H6X4 195 aa17.34■□□□□ 0.37
COL1A1-204ENST00000474644 OLFML3Q9NRN5 406 aa17.34■□□□□ 0.37
COL1A1-204ENST00000474644 C1orf112Q9NSG2 853 aa17.34■□□□□ 0.37
COL1A1-204ENST00000474644 C9IYK1 514 aa17.33■□□□□ 0.36
COL1A1-204ENST00000474644 H0YCG3 227 aa17.33■□□□□ 0.36
COL1A1-204ENST00000474644 K7ERI5 159 aa17.33■□□□□ 0.36
COL1A1-204ENST00000474644 GTPBP6O43824 516 aaPredicted RBP17.33■□□□□ 0.36
COL1A1-204ENST00000474644 MYL1P05976 194 aa17.33■□□□□ 0.36
COL1A1-204ENST00000474644 PRR29P0C7W0 189 aa17.33■□□□□ 0.36
COL1A1-204ENST00000474644 NMT1P30419 496 aaKnown RBP17.33■□□□□ 0.36
COL1A1-204ENST00000474644 AXLP30530 894 aa17.33■□□□□ 0.36
COL1A1-204ENST00000474644 SARSP49591 514 aaKnown RBP17.33■□□□□ 0.36
COL1A1-204ENST00000474644 NCBP1Q09161 790 aaKnown RBP17.33■□□□□ 0.36
COL1A1-204ENST00000474644 COASYQ13057 564 aa17.33■□□□□ 0.36
COL1A1-204ENST00000474644 PRPF4BQ13523 1007 aaKnown RBP17.33■□□□□ 0.36
COL1A1-204ENST00000474644 HERC4Q5GLZ8 1057 aaPredicted RBP17.33■□□□□ 0.36
COL1A1-204ENST00000474644 TWF2Q6IBS0 349 aaKnown RBP17.33■□□□□ 0.36
COL1A1-204ENST00000474644 NOTUMQ6P988 496 aa17.33■□□□□ 0.36
COL1A1-204ENST00000474644 SLC24A5Q71RS6 500 aa17.33■□□□□ 0.36
COL1A1-204ENST00000474644 HERC6Q8IVU3 1022 aa17.33■□□□□ 0.36
COL1A1-204ENST00000474644 CCDC51Q96ER9 411 aa17.33■□□□□ 0.36
COL1A1-204ENST00000474644 DACT1Q9NYF0 836 aa17.33■□□□□ 0.36
COL1A1-204ENST00000474644 USP20Q9Y2K6 914 aa17.33■□□□□ 0.36
COL1A1-204ENST00000474644 PTPRSQ13332 1948 aa17.33■□□□□ 0.36
COL1A1-204ENST00000474644 GRXCR1A8MXD5 290 aa17.32■□□□□ 0.36
COL1A1-204ENST00000474644 IBSPP21815 317 aaPredicted RBP17.32■□□□□ 0.36
COL1A1-204ENST00000474644 SCP2P22307 547 aa17.32■□□□□ 0.36
COL1A1-204ENST00000474644 LRIT3Q3SXY7 679 aa17.32■□□□□ 0.36
COL1A1-204ENST00000474644 UBXN11Q5T124 520 aa17.32■□□□□ 0.36
COL1A1-204ENST00000474644 NT5DC1Q5TFE4 455 aa17.32■□□□□ 0.36
COL1A1-204ENST00000474644 UNC13DQ70J99 1090 aa17.32■□□□□ 0.36
COL1A1-204ENST00000474644 NPAS4Q8IUM7 802 aa17.32■□□□□ 0.36
COL1A1-204ENST00000474644 CRIPAKQ8N1N5 446 aa17.32■□□□□ 0.36
COL1A1-204ENST00000474644 SLC17A8Q8NDX2 589 aa17.32■□□□□ 0.36
COL1A1-204ENST00000474644 TOP1MTQ969P6 601 aa17.32■□□□□ 0.36
COL1A1-204ENST00000474644 TIGD1Q96MW7 591 aa17.32■□□□□ 0.36
COL1A1-204ENST00000474644 TRAIPQ9BWF2 469 aa17.32■□□□□ 0.36
COL1A1-204ENST00000474644 FGFBP2Q9BYJ0 223 aa17.32■□□□□ 0.36
COL1A1-204ENST00000474644 ST6GALNAC4Q9H4F1 302 aa17.32■□□□□ 0.36
COL1A1-204ENST00000474644 PDZD7Q9H5P4 517 aa17.32■□□□□ 0.36
COL1A1-204ENST00000474644 MRPL44Q9H9J2 332 aaKnown RBP17.32■□□□□ 0.36
COL1A1-204ENST00000474644 TBC1D7Q9P0N9 293 aa17.32■□□□□ 0.36
COL1A1-204ENST00000474644 A0A0U1RQF3 1178 aa17.31■□□□□ 0.36
COL1A1-204ENST00000474644 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.31■□□□□ 0.36
COL1A1-204ENST00000474644 A0A1B0GUA9 196 aa17.31■□□□□ 0.36
COL1A1-204ENST00000474644 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.31■□□□□ 0.36
COL1A1-204ENST00000474644 PVALEFA0A1B0GWK0 134 aa17.31■□□□□ 0.36
COL1A1-204ENST00000474644 GJB5O95377 273 aa17.31■□□□□ 0.36
COL1A1-204ENST00000474644 RAB27AP51159 221 aa17.31■□□□□ 0.36
COL1A1-204ENST00000474644 FAM189BP81408 668 aa17.31■□□□□ 0.36
COL1A1-204ENST00000474644 EHHADHQ08426 723 aa17.31■□□□□ 0.36
COL1A1-204ENST00000474644 STRN3Q13033 797 aa17.31■□□□□ 0.36
COL1A1-204ENST00000474644 TMEM132AQ24JP5 1023 aa17.31■□□□□ 0.36
COL1A1-204ENST00000474644 ZC2HC1CQ53FD0 456 aaPredicted RBP17.31■□□□□ 0.36
COL1A1-204ENST00000474644 KANK3Q6NY19 840 aa17.31■□□□□ 0.36
COL1A1-204ENST00000474644 FAM117BQ6P1L5 589 aa17.31■□□□□ 0.36
COL1A1-204ENST00000474644 ZNF720Q7Z2F6 126 aa17.31■□□□□ 0.36
COL1A1-204ENST00000474644 CDR2LQ86X02 465 aaPredicted RBP17.31■□□□□ 0.36
COL1A1-204ENST00000474644 HPS3Q969F9 1004 aa17.31■□□□□ 0.36
COL1A1-204ENST00000474644 CCDC34Q96HJ3 373 aa17.31■□□□□ 0.36
COL1A1-204ENST00000474644 MRPL4Q9BYD3 311 aaKnown RBP17.31■□□□□ 0.36
COL1A1-204ENST00000474644 LMBRD1Q9NUN5 540 aa17.31■□□□□ 0.36
COL1A1-204ENST00000474644 FAM105AQ9NUU6 356 aa17.31■□□□□ 0.36
COL1A1-204ENST00000474644 TBX20Q9UMR3 447 aa17.31■□□□□ 0.36
COL1A1-204ENST00000474644 MYH11P35749 1972 aa17.31■□□□□ 0.36
COL1A1-204ENST00000474644 N4BP3O15049 544 aa17.3■□□□□ 0.36
COL1A1-204ENST00000474644 KLRC4O43908 158 aa17.3■□□□□ 0.36
COL1A1-204ENST00000474644 KINO60870 393 aaKnown RBP17.3■□□□□ 0.36
COL1A1-204ENST00000474644 PPP1R37O75864 691 aa17.3■□□□□ 0.36
COL1A1-204ENST00000474644 UPP2O95045 317 aa17.3■□□□□ 0.36
COL1A1-204ENST00000474644 MYBP10242 640 aa17.3■□□□□ 0.36
COL1A1-204ENST00000474644 ATF7P17544 494 aaPredicted RBP17.3■□□□□ 0.36
COL1A1-204ENST00000474644 ABCD1P33897 745 aa17.3■□□□□ 0.36
COL1A1-204ENST00000474644 CASP5P51878 434 aa17.3■□□□□ 0.36
COL1A1-204ENST00000474644 GTF2BQ00403 316 aa17.3■□□□□ 0.36
COL1A1-204ENST00000474644 DPYDQ12882 1025 aa17.3■□□□□ 0.36
COL1A1-204ENST00000474644 POSTNQ15063 836 aa17.3■□□□□ 0.36
COL1A1-204ENST00000474644 FAM26FQ5R3K3 315 aa17.3■□□□□ 0.36
COL1A1-204ENST00000474644 ATF7IP2Q5U623 682 aa17.3■□□□□ 0.36
COL1A1-204ENST00000474644 SLC27A1Q6PCB7 646 aa17.3■□□□□ 0.36
COL1A1-204ENST00000474644 ECHDC2Q86YB7 292 aa17.3■□□□□ 0.36
COL1A1-204ENST00000474644 MAP4K3Q8IVH8 894 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms