RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 KRT39Q6A163 491 aa23.63■■□□□ 1.37
CCM2-206ENST00000474617 GPAT2Q6NUI2 795 aa23.63■■□□□ 1.37
CCM2-206ENST00000474617 ZNF571Q7Z3V5 609 aaPredicted RBP23.63■■□□□ 1.37
CCM2-206ENST00000474617 LMO3Q8TAP4 145 aa23.63■■□□□ 1.37
CCM2-206ENST00000474617 SLC10A4Q96EP9 437 aa23.63■■□□□ 1.37
CCM2-206ENST00000474617 TMEM8AQ9HCN3 771 aa23.63■■□□□ 1.37
CCM2-206ENST00000474617 COQ4Q9Y3A0 265 aa23.63■■□□□ 1.37
CCM2-206ENST00000474617 STYXL1Q9Y6J8 313 aa23.63■■□□□ 1.37
CCM2-206ENST00000474617 HNRNPDLO14979 420 aaKnown RBP23.62■■□□□ 1.37
CCM2-206ENST00000474617 ZC3H11AO75152 810 aaKnown RBP eCLIP23.62■■□□□ 1.37
CCM2-206ENST00000474617 STAT5BP51692 787 aa23.62■■□□□ 1.37
CCM2-206ENST00000474617 KIF22Q14807 665 aa23.62■■□□□ 1.37
CCM2-206ENST00000474617 DRAP1Q14919 205 aaPredicted RBP23.62■■□□□ 1.37
CCM2-206ENST00000474617 MTERF2Q49AM1 385 aa23.62■■□□□ 1.37
CCM2-206ENST00000474617 CCDC70Q6NSX1 233 aa23.62■■□□□ 1.37
CCM2-206ENST00000474617 ALKBH5Q6P6C2 394 aaKnown RBP23.62■■□□□ 1.37
CCM2-206ENST00000474617 PLPPR4Q7Z2D5 763 aa23.62■■□□□ 1.37
CCM2-206ENST00000474617 GPD1LQ8N335 351 aa23.62■■□□□ 1.37
CCM2-206ENST00000474617 HNRNPLLQ8WVV9 542 aaKnown RBP23.62■■□□□ 1.37
CCM2-206ENST00000474617 IKZF4Q9H2S9 585 aa23.62■■□□□ 1.37
CCM2-206ENST00000474617 PCIF1Q9H4Z3 704 aa23.62■■□□□ 1.37
CCM2-206ENST00000474617 TMEM134Q9H6X4 195 aa23.62■■□□□ 1.37
CCM2-206ENST00000474617 MLXIPQ9HAP2 919 aa23.62■■□□□ 1.37
CCM2-206ENST00000474617 DUSP10Q9Y6W6 482 aa23.62■■□□□ 1.37
CCM2-206ENST00000474617 GSTTP1A0A1W2PQM5 241 aa23.61■■□□□ 1.37
CCM2-206ENST00000474617 CES2O00748 559 aa23.61■■□□□ 1.37
CCM2-206ENST00000474617 EVI5O60447 810 aa23.61■■□□□ 1.37
CCM2-206ENST00000474617 LGR5O75473 907 aa23.61■■□□□ 1.37
CCM2-206ENST00000474617 ERLIN1O75477 346 aa23.61■■□□□ 1.37
CCM2-206ENST00000474617 LDHAP00338 332 aaKnown RBP23.61■■□□□ 1.37
CCM2-206ENST00000474617 CETPP11597 493 aa23.61■■□□□ 1.37
CCM2-206ENST00000474617 ADSSP30520 456 aa23.61■■□□□ 1.37
CCM2-206ENST00000474617 ARL2P36404 184 aa23.61■■□□□ 1.37
CCM2-206ENST00000474617 TARBP2Q15633 366 aaKnown RBP23.61■■□□□ 1.37
CCM2-206ENST00000474617 ENOSF1Q7L5Y1 443 aa23.61■■□□□ 1.37
CCM2-206ENST00000474617 ABRAQ8N0Z2 381 aa23.61■■□□□ 1.37
CCM2-206ENST00000474617 TCP11Q8WWU5 503 aa23.61■■□□□ 1.37
CCM2-206ENST00000474617 BBXQ8WY36 941 aaPredicted RBP23.61■■□□□ 1.37
CCM2-206ENST00000474617 BSNDQ8WZ55 320 aa23.61■■□□□ 1.37
CCM2-206ENST00000474617 POMGNT1Q8WZA1 660 aa23.61■■□□□ 1.37
CCM2-206ENST00000474617 RAB21Q9UL25 225 aa23.61■■□□□ 1.37
CCM2-206ENST00000474617 CAPN6Q9Y6Q1 641 aa23.61■■□□□ 1.37
CCM2-206ENST00000474617 MOCS3O95396 460 aa23.6■■□□□ 1.37
CCM2-206ENST00000474617 EFNA5P52803 228 aa23.6■■□□□ 1.37
CCM2-206ENST00000474617 ERVK-9P63128 1117 aa23.6■■□□□ 1.37
CCM2-206ENST00000474617 APBA1Q02410 837 aa23.6■■□□□ 1.37
CCM2-206ENST00000474617 SP4Q02446 784 aa23.6■■□□□ 1.37
CCM2-206ENST00000474617 RDH13Q8NBN7 331 aa23.6■■□□□ 1.37
CCM2-206ENST00000474617 DEPTORQ8TB45 409 aa23.6■■□□□ 1.37
CCM2-206ENST00000474617 PARD3BQ8TEW8 1205 aa23.6■■□□□ 1.37
CCM2-206ENST00000474617 SH2D3AQ9BRG2 576 aa23.6■■□□□ 1.37
CCM2-206ENST00000474617 OGFRQ9NZT2 677 aa23.6■■□□□ 1.37
CCM2-206ENST00000474617 PUF60Q9UHX1 559 aaKnown RBP23.6■■□□□ 1.37
CCM2-206ENST00000474617 DDX41Q9UJV9 622 aaKnown RBP23.6■■□□□ 1.37
CCM2-206ENST00000474617 TARSL2A2RTX5 802 aaKnown RBP23.59■■□□□ 1.37
CCM2-206ENST00000474617 EXTL3O43909 919 aa23.59■■□□□ 1.37
CCM2-206ENST00000474617 GGPS1O95749 300 aa23.59■■□□□ 1.37
CCM2-206ENST00000474617 H2AFZP0C0S5 128 aa23.59■■□□□ 1.37
CCM2-206ENST00000474617 ATP4AP20648 1035 aa23.59■■□□□ 1.37
CCM2-206ENST00000474617 GCLCP48506 637 aaPredicted RBP23.59■■□□□ 1.37
CCM2-206ENST00000474617 NAP1L1P55209 391 aaKnown RBP23.59■■□□□ 1.37
CCM2-206ENST00000474617 DLK2Q6UY11 383 aa23.59■■□□□ 1.37
CCM2-206ENST00000474617 H2AFVQ71UI9 128 aa23.59■■□□□ 1.37
CCM2-206ENST00000474617 BICD1Q96G01 975 aa23.59■■□□□ 1.37
CCM2-206ENST00000474617 TFR2Q9UP52 801 aa23.59■■□□□ 1.37
CCM2-206ENST00000474617 ZNF233A6NK53 670 aa23.59■■□□□ 1.37
CCM2-206ENST00000474617 ENC1O14682 589 aa23.59■■□□□ 1.37
CCM2-206ENST00000474617 MAFO75444 373 aaPredicted RBP23.59■■□□□ 1.37
CCM2-206ENST00000474617 LIG4P49917 911 aa23.59■■□□□ 1.37
CCM2-206ENST00000474617 GPC3P51654 580 aa23.59■■□□□ 1.37
CCM2-206ENST00000474617 CLCN6P51797 869 aa23.59■■□□□ 1.37
CCM2-206ENST00000474617 GTF2A2P52657 109 aa23.59■■□□□ 1.37
CCM2-206ENST00000474617 MFAP3P55082 362 aa23.59■■□□□ 1.37
CCM2-206ENST00000474617 CYP24A1Q07973 514 aa23.59■■□□□ 1.37
CCM2-206ENST00000474617 PPP3CAQ08209 521 aa23.59■■□□□ 1.37
CCM2-206ENST00000474617 EAPPQ56P03 285 aaPredicted RBP23.59■■□□□ 1.37
CCM2-206ENST00000474617 CELF3Q5SZQ8 465 aaKnown RBP23.59■■□□□ 1.37
CCM2-206ENST00000474617 SYCE1Q8N0S2 351 aa23.59■■□□□ 1.37
CCM2-206ENST00000474617 SLC30A5Q8TAD4 765 aa23.59■■□□□ 1.37
CCM2-206ENST00000474617 CAGE1Q8TC20 777 aa23.59■■□□□ 1.37
CCM2-206ENST00000474617 CEP89Q96ST8 783 aa23.59■■□□□ 1.37
CCM2-206ENST00000474617 ARFGAP3Q9NP61 516 aa23.59■■□□□ 1.37
CCM2-206ENST00000474617 ANKRD63C9JTQ0 380 aa23.58■■□□□ 1.36
CCM2-206ENST00000474617 PAFAH1B1P43034 410 aa23.58■■□□□ 1.36
CCM2-206ENST00000474617 CLDN10P78369 228 aa23.58■■□□□ 1.36
CCM2-206ENST00000474617 C1orf220Q5T0J3 134 aa23.58■■□□□ 1.36
CCM2-206ENST00000474617 IER5Q5VY09 327 aa23.58■■□□□ 1.36
CCM2-206ENST00000474617 GPRC5AQ8NFJ5 357 aa23.58■■□□□ 1.36
CCM2-206ENST00000474617 PARD6BQ9BYG5 372 aa23.58■■□□□ 1.36
CCM2-206ENST00000474617 TMEM117Q9H0C3 514 aa23.58■■□□□ 1.36
CCM2-206ENST00000474617 DOCK5Q9H7D0 1870 aa23.57■■□□□ 1.36
CCM2-206ENST00000474617 NOP56O00567 594 aaKnown RBP23.57■■□□□ 1.36
CCM2-206ENST00000474617 STRNO43815 780 aa23.57■■□□□ 1.36
CCM2-206ENST00000474617 TCF7P36402 384 aaPredicted RBP23.57■■□□□ 1.36
CCM2-206ENST00000474617 GCLMP48507 274 aa23.57■■□□□ 1.36
CCM2-206ENST00000474617 MXD4Q14582 209 aaPredicted RBP23.57■■□□□ 1.36
CCM2-206ENST00000474617 TTLL4Q14679 1199 aa23.57■■□□□ 1.36
CCM2-206ENST00000474617 PHLDB3Q6NSJ2 640 aa23.57■■□□□ 1.36
CCM2-206ENST00000474617 WDR93Q6P2C0 686 aa23.57■■□□□ 1.36
CCM2-206ENST00000474617 ZNF467Q7Z7K2 595 aaPredicted RBP23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms