RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 TLR9Q9NR96 1032 aa12.4□□□□□ -0.42
CKS1B-206ENST00000474215 DDX19AQ9NUU7 478 aaKnown RBP12.4□□□□□ -0.42
CKS1B-206ENST00000474215 DNM3Q9UQ16 869 aa12.4□□□□□ -0.42
CKS1B-206ENST00000474215 FNDC1Q4ZHG4 1894 aaPredicted RBP12.4□□□□□ -0.42
CKS1B-206ENST00000474215 LRRIQ4A6NIV6 560 aa12.39□□□□□ -0.43
CKS1B-206ENST00000474215 PP2D1A8MPX8 630 aa12.39□□□□□ -0.43
CKS1B-206ENST00000474215 NCLP19338 710 aaKnown RBP12.39□□□□□ -0.43
CKS1B-206ENST00000474215 CDC25AP30304 524 aa12.39□□□□□ -0.43
CKS1B-206ENST00000474215 LTBRP36941 435 aa12.39□□□□□ -0.43
CKS1B-206ENST00000474215 PBX3P40426 434 aa12.39□□□□□ -0.43
CKS1B-206ENST00000474215 NRIP1P48552 1158 aa12.39□□□□□ -0.43
CKS1B-206ENST00000474215 BCAR1P56945 870 aa12.39□□□□□ -0.43
CKS1B-206ENST00000474215 RNASELQ05823 741 aaKnown RBP12.39□□□□□ -0.43
CKS1B-206ENST00000474215 PTCRAQ6ISU1 281 aaPredicted RBP12.39□□□□□ -0.43
CKS1B-206ENST00000474215 ADGRD2Q7Z7M1 963 aa12.39□□□□□ -0.43
CKS1B-206ENST00000474215 RBM23Q86U06 439 aaKnown RBP12.39□□□□□ -0.43
CKS1B-206ENST00000474215 SMG8Q8ND04 991 aaKnown RBP12.39□□□□□ -0.43
CKS1B-206ENST00000474215 CPB2Q96IY4 423 aa12.39□□□□□ -0.43
CKS1B-206ENST00000474215 NECAB3Q96P71 396 aaPredicted RBP12.39□□□□□ -0.43
CKS1B-206ENST00000474215 MMTAG2Q9BU76 263 aaKnown RBP12.39□□□□□ -0.43
CKS1B-206ENST00000474215 CSRNP2Q9H175 543 aa12.39□□□□□ -0.43
CKS1B-206ENST00000474215 TLE6Q9H808 572 aa12.39□□□□□ -0.43
CKS1B-206ENST00000474215 UBN1Q9NPG3 1134 aa12.39□□□□□ -0.43
CKS1B-206ENST00000474215 TBC1D13Q9NVG8 400 aa12.39□□□□□ -0.43
CKS1B-206ENST00000474215 KANSL3Q9P2N6 904 aa12.39□□□□□ -0.43
CKS1B-206ENST00000474215 INPP5FQ9Y2H2 1132 aa12.39□□□□□ -0.43
CKS1B-206ENST00000474215 PCDHGC5Q9Y5F6 944 aa12.39□□□□□ -0.43
CKS1B-206ENST00000474215 ARID2Q68CP9 1835 aa12.39□□□□□ -0.43
CKS1B-206ENST00000474215 CNTNAP2Q9UHC6 1331 aa12.38□□□□□ -0.43
CKS1B-206ENST00000474215 A0A1B0GUA9 196 aa12.38□□□□□ -0.43
CKS1B-206ENST00000474215 CARNS1A5YM72 827 aa12.38□□□□□ -0.43
CKS1B-206ENST00000474215 GRXCR2A6NFK2 248 aa12.38□□□□□ -0.43
CKS1B-206ENST00000474215 E9PMD0 336 aa12.38□□□□□ -0.43
CKS1B-206ENST00000474215 FSCN2O14926 492 aa12.38□□□□□ -0.43
CKS1B-206ENST00000474215 LINC01565O15544 149 aa12.38□□□□□ -0.43
CKS1B-206ENST00000474215 B4GALT5O43286 388 aa12.38□□□□□ -0.43
CKS1B-206ENST00000474215 EYA4O95677 639 aa12.38□□□□□ -0.43
CKS1B-206ENST00000474215 ITGA4P13612 1032 aa12.38□□□□□ -0.43
CKS1B-206ENST00000474215 ARF4P18085 180 aaPredicted RBP12.38□□□□□ -0.43
CKS1B-206ENST00000474215 PDCP20941 246 aa12.38□□□□□ -0.43
CKS1B-206ENST00000474215 PPP2R5AQ15172 486 aa12.38□□□□□ -0.43
CKS1B-206ENST00000474215 ARL6IP4Q66PJ3 421 aaKnown RBP12.38□□□□□ -0.43
CKS1B-206ENST00000474215 CDCA2Q69YH5 1023 aaPredicted RBP12.38□□□□□ -0.43
CKS1B-206ENST00000474215 BRAPQ7Z569 592 aa12.38□□□□□ -0.43
CKS1B-206ENST00000474215 ZBTB8OSQ8IWT0 167 aa12.38□□□□□ -0.43
CKS1B-206ENST00000474215 SLC39A11Q8N1S5 342 aa12.38□□□□□ -0.43
CKS1B-206ENST00000474215 EFHBQ8N7U6 833 aa12.38□□□□□ -0.43
CKS1B-206ENST00000474215 URGCPQ8TCY9 931 aa12.38□□□□□ -0.43
CKS1B-206ENST00000474215 KIFAP3Q92845 792 aa12.38□□□□□ -0.43
CKS1B-206ENST00000474215 EIF2AQ9BY44 585 aaKnown RBP12.38□□□□□ -0.43
CKS1B-206ENST00000474215 C2orf40Q9H1Z8 148 aa12.38□□□□□ -0.43
CKS1B-206ENST00000474215 FZD8Q9H461 694 aa12.38□□□□□ -0.43
CKS1B-206ENST00000474215 NRDE2Q9H7Z3 1164 aa12.38□□□□□ -0.43
CKS1B-206ENST00000474215 RSAD1Q9HA92 442 aa12.38□□□□□ -0.43
CKS1B-206ENST00000474215 NGRNQ9NPE2 291 aaKnown RBP12.38□□□□□ -0.43
CKS1B-206ENST00000474215 PRMT7Q9NVM4 692 aaPredicted RBP12.38□□□□□ -0.43
CKS1B-206ENST00000474215 IPPQ9Y573 584 aa12.38□□□□□ -0.43
CKS1B-206ENST00000474215 SPTBN5Q9NRC6 3674 aaKnown RBP12.38□□□□□ -0.43
CKS1B-206ENST00000474215 TTC28Q96AY4 2481 aa12.37□□□□□ -0.43
CKS1B-206ENST00000474215 KIAA1671Q9BY89 1806 aa12.37□□□□□ -0.43
CKS1B-206ENST00000474215 BDP1A6H8Y1 2624 aa12.37□□□□□ -0.43
CKS1B-206ENST00000474215 VWA3AA6NCI4 1184 aa12.37□□□□□ -0.43
CKS1B-206ENST00000474215 NT5C1B-RDH14C9J2C7 533 aa12.37□□□□□ -0.43
CKS1B-206ENST00000474215 ZC3H11AO75152 810 aaKnown RBP eCLIP12.37□□□□□ -0.43
CKS1B-206ENST00000474215 GALTP07902 379 aa12.37□□□□□ -0.43
CKS1B-206ENST00000474215 NAMPTP43490 491 aa12.37□□□□□ -0.43
CKS1B-206ENST00000474215 AFF1P51825 1210 aaKnown RBP12.37□□□□□ -0.43
CKS1B-206ENST00000474215 DLX2Q07687 328 aaPredicted RBP12.37□□□□□ -0.43
CKS1B-206ENST00000474215 FAM187BQ17R55 369 aa12.37□□□□□ -0.43
CKS1B-206ENST00000474215 SLC27A1Q6PCB7 646 aa12.37□□□□□ -0.43
CKS1B-206ENST00000474215 TMC7Q7Z402 723 aa12.37□□□□□ -0.43
CKS1B-206ENST00000474215 ZNF280BQ86YH2 543 aa12.37□□□□□ -0.43
CKS1B-206ENST00000474215 KCTD17Q8N5Z5 321 aa12.37□□□□□ -0.43
CKS1B-206ENST00000474215 DEPTORQ8TB45 409 aa12.37□□□□□ -0.43
CKS1B-206ENST00000474215 BSNDQ8WZ55 320 aa12.37□□□□□ -0.43
CKS1B-206ENST00000474215 INTS4Q96HW7 963 aaKnown RBP12.37□□□□□ -0.43
CKS1B-206ENST00000474215 IFT74Q96LB3 600 aa12.37□□□□□ -0.43
CKS1B-206ENST00000474215 PRIMPOLQ96LW4 560 aa12.37□□□□□ -0.43
CKS1B-206ENST00000474215 TCF25Q9BQ70 676 aa12.37□□□□□ -0.43
CKS1B-206ENST00000474215 TRIM6Q9C030 488 aaPredicted RBP12.37□□□□□ -0.43
CKS1B-206ENST00000474215 POLD4Q9HCU8 107 aa12.37□□□□□ -0.43
CKS1B-206ENST00000474215 ENTPD7Q9NQZ7 604 aa12.37□□□□□ -0.43
CKS1B-206ENST00000474215 FAM50BQ9Y247 325 aa12.37□□□□□ -0.43
CKS1B-206ENST00000474215 GTF3C3Q9Y5Q9 886 aa12.37□□□□□ -0.43
CKS1B-206ENST00000474215 VPS37CA5D8V6 355 aaPredicted RBP12.36□□□□□ -0.43
CKS1B-206ENST00000474215 ARL5CA6NH57 179 aa12.36□□□□□ -0.43
CKS1B-206ENST00000474215 PER2O15055 1255 aa12.36□□□□□ -0.43
CKS1B-206ENST00000474215 DDHD2O94830 711 aa12.36□□□□□ -0.43
CKS1B-206ENST00000474215 BMP15O95972 392 aa12.36□□□□□ -0.43
CKS1B-206ENST00000474215 POMCP01189 267 aa12.36□□□□□ -0.43
CKS1B-206ENST00000474215 ALDH2P05091 517 aa12.36□□□□□ -0.43
CKS1B-206ENST00000474215 EFNA5P52803 228 aa12.36□□□□□ -0.43
CKS1B-206ENST00000474215 PRPF4BQ13523 1007 aaKnown RBP12.36□□□□□ -0.43
CKS1B-206ENST00000474215 ZRSR1Q15695 479 aaKnown RBP12.36□□□□□ -0.43
CKS1B-206ENST00000474215 MAPK6Q16659 721 aa12.36□□□□□ -0.43
CKS1B-206ENST00000474215 DUSP6Q16828 381 aa12.36□□□□□ -0.43
CKS1B-206ENST00000474215 HYIQ5T013 277 aa12.36□□□□□ -0.43
CKS1B-206ENST00000474215 KCNK18Q7Z418 384 aa12.36□□□□□ -0.43
CKS1B-206ENST00000474215 CDR2LQ86X02 465 aaPredicted RBP12.36□□□□□ -0.43
CKS1B-206ENST00000474215 FAM178BQ8IXR5 827 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms