RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 NT5C1B-RDH14C9J2C7 533 aa19.88■□□□□ 0.77
UPF3A-203ENST00000474056 TNFRSF10AO00220 468 aa19.88■□□□□ 0.77
UPF3A-203ENST00000474056 IL9P15248 144 aa19.88■□□□□ 0.77
UPF3A-203ENST00000474056 ARF4P18085 180 aaPredicted RBP19.88■□□□□ 0.77
UPF3A-203ENST00000474056 CYP11B2P19099 503 aa19.88■□□□□ 0.77
UPF3A-203ENST00000474056 DLX2Q07687 328 aaPredicted RBP19.88■□□□□ 0.77
UPF3A-203ENST00000474056 NOMO2Q5JPE7 1267 aa19.88■□□□□ 0.77
UPF3A-203ENST00000474056 NOTUMQ6P988 496 aa19.88■□□□□ 0.77
UPF3A-203ENST00000474056 GLB1LQ6UWU2 654 aa19.88■□□□□ 0.77
UPF3A-203ENST00000474056 SLC39A11Q8N1S5 342 aa19.88■□□□□ 0.77
UPF3A-203ENST00000474056 SMG8Q8ND04 991 aaKnown RBP19.88■□□□□ 0.77
UPF3A-203ENST00000474056 PPP2R3CQ969Q6 453 aa19.88■□□□□ 0.77
UPF3A-203ENST00000474056 MMTAG2Q9BU76 263 aaKnown RBP19.88■□□□□ 0.77
UPF3A-203ENST00000474056 RSAD1Q9HA92 442 aa19.88■□□□□ 0.77
UPF3A-203ENST00000474056 LZTS1Q9Y250 596 aa19.88■□□□□ 0.77
UPF3A-203ENST00000474056 STK24Q9Y6E0 443 aa19.88■□□□□ 0.77
UPF3A-203ENST00000474056 E9PMD0 336 aa19.87■□□□□ 0.77
UPF3A-203ENST00000474056 FSCN2O14926 492 aa19.87■□□□□ 0.77
UPF3A-203ENST00000474056 B4GALT5O43286 388 aa19.87■□□□□ 0.77
UPF3A-203ENST00000474056 NCK2O43639 380 aa19.87■□□□□ 0.77
UPF3A-203ENST00000474056 ZC3H11AO75152 810 aaKnown RBP eCLIP19.87■□□□□ 0.77
UPF3A-203ENST00000474056 TBX10O75333 385 aa19.87■□□□□ 0.77
UPF3A-203ENST00000474056 NCLP19338 710 aaKnown RBP19.87■□□□□ 0.77
UPF3A-203ENST00000474056 PPM1AP35813 382 aa19.87■□□□□ 0.77
UPF3A-203ENST00000474056 NRIP1P48552 1158 aa19.87■□□□□ 0.77
UPF3A-203ENST00000474056 AFF1P51825 1210 aaKnown RBP19.87■□□□□ 0.77
UPF3A-203ENST00000474056 PLPP4Q5VZY2 271 aa19.87■□□□□ 0.77
UPF3A-203ENST00000474056 KRT79Q5XKE5 535 aa19.87■□□□□ 0.77
UPF3A-203ENST00000474056 CDCA2Q69YH5 1023 aaPredicted RBP19.87■□□□□ 0.77
UPF3A-203ENST00000474056 RBM23Q86U06 439 aaKnown RBP19.87■□□□□ 0.77
UPF3A-203ENST00000474056 CDR2LQ86X02 465 aaPredicted RBP19.87■□□□□ 0.77
UPF3A-203ENST00000474056 MICAL1Q8TDZ2 1067 aa19.87■□□□□ 0.77
UPF3A-203ENST00000474056 RSPH1Q8WYR4 309 aa19.87■□□□□ 0.77
UPF3A-203ENST00000474056 CSRNP2Q9H175 543 aa19.87■□□□□ 0.77
UPF3A-203ENST00000474056 NRDE2Q9H7Z3 1164 aa19.87■□□□□ 0.77
UPF3A-203ENST00000474056 POLD4Q9HCU8 107 aa19.87■□□□□ 0.77
UPF3A-203ENST00000474056 SPG21Q9NZD8 308 aa19.87■□□□□ 0.77
UPF3A-203ENST00000474056 IPPQ9Y573 584 aa19.87■□□□□ 0.77
UPF3A-203ENST00000474056 MYH15Q9Y2K3 1946 aa19.86■□□□□ 0.77
UPF3A-203ENST00000474056 CNTNAP2Q9UHC6 1331 aa19.86■□□□□ 0.77
UPF3A-203ENST00000474056 B4GALT3O60512 393 aa19.86■□□□□ 0.77
UPF3A-203ENST00000474056 BCAR1P56945 870 aa19.86■□□□□ 0.77
UPF3A-203ENST00000474056 PTCRAQ6ISU1 281 aaPredicted RBP19.86■□□□□ 0.77
UPF3A-203ENST00000474056 CCDC51Q96ER9 411 aa19.86■□□□□ 0.77
UPF3A-203ENST00000474056 GBP3Q9H0R5 595 aa19.86■□□□□ 0.77
UPF3A-203ENST00000474056 RNF39Q9H2S5 420 aa19.86■□□□□ 0.77
UPF3A-203ENST00000474056 HES2Q9Y543 173 aa19.86■□□□□ 0.77
UPF3A-203ENST00000474056 VPS37CA5D8V6 355 aaPredicted RBP19.85■□□□□ 0.77
UPF3A-203ENST00000474056 VWA3AA6NCI4 1184 aa19.85■□□□□ 0.77
UPF3A-203ENST00000474056 ALDH7A1P49419 539 aaKnown RBP19.85■□□□□ 0.77
UPF3A-203ENST00000474056 RNASELQ05823 741 aaKnown RBP19.85■□□□□ 0.77
UPF3A-203ENST00000474056 NCBP1Q09161 790 aaKnown RBP19.85■□□□□ 0.77
UPF3A-203ENST00000474056 ADAM15Q13444 863 aa19.85■□□□□ 0.77
UPF3A-203ENST00000474056 CLUL1Q15846 466 aa19.85■□□□□ 0.77
UPF3A-203ENST00000474056 PPP4R3CPQ6ZMV5 832 aa19.85■□□□□ 0.77
UPF3A-203ENST00000474056 KCNK18Q7Z418 384 aa19.85■□□□□ 0.77
UPF3A-203ENST00000474056 TMEM173Q86WV6 379 aaPredicted RBP19.85■□□□□ 0.77
UPF3A-203ENST00000474056 ZBTB8OSQ8IWT0 167 aa19.85■□□□□ 0.77
UPF3A-203ENST00000474056 CNNM3Q8NE01 707 aa19.85■□□□□ 0.77
UPF3A-203ENST00000474056 DNAJB4Q9UDY4 337 aa19.85■□□□□ 0.77
UPF3A-203ENST00000474056 PUF60Q9UHX1 559 aaKnown RBP19.85■□□□□ 0.77
UPF3A-203ENST00000474056 GTF3C3Q9Y5Q9 886 aa19.85■□□□□ 0.77
UPF3A-203ENST00000474056 GRXCR2A6NFK2 248 aa19.84■□□□□ 0.77
UPF3A-203ENST00000474056 TTLL13PA6NNM8 815 aa19.84■□□□□ 0.77
UPF3A-203ENST00000474056 PER2O15055 1255 aa19.84■□□□□ 0.77
UPF3A-203ENST00000474056 EYA4O95677 639 aa19.84■□□□□ 0.77
UPF3A-203ENST00000474056 ITGA4P13612 1032 aa19.84■□□□□ 0.77
UPF3A-203ENST00000474056 NAMPTP43490 491 aa19.84■□□□□ 0.77
UPF3A-203ENST00000474056 NDUFV1P49821 464 aa19.84■□□□□ 0.77
UPF3A-203ENST00000474056 KRT17Q04695 432 aa19.84■□□□□ 0.77
UPF3A-203ENST00000474056 BRAPQ7Z569 592 aa19.84■□□□□ 0.77
UPF3A-203ENST00000474056 ZNF280BQ86YH2 543 aa19.84■□□□□ 0.77
UPF3A-203ENST00000474056 EFHBQ8N7U6 833 aa19.84■□□□□ 0.77
UPF3A-203ENST00000474056 URGCPQ8TCY9 931 aa19.84■□□□□ 0.77
UPF3A-203ENST00000474056 PRIMPOLQ96LW4 560 aa19.84■□□□□ 0.77
UPF3A-203ENST00000474056 TCF25Q9BQ70 676 aa19.84■□□□□ 0.77
UPF3A-203ENST00000474056 APOL6Q9BWW8 343 aa19.84■□□□□ 0.77
UPF3A-203ENST00000474056 FZD8Q9H461 694 aa19.84■□□□□ 0.77
UPF3A-203ENST00000474056 NXF3Q9H4D5 531 aaKnown RBP19.84■□□□□ 0.77
UPF3A-203ENST00000474056 ENTPD7Q9NQZ7 604 aa19.84■□□□□ 0.77
UPF3A-203ENST00000474056 PRMT7Q9NVM4 692 aaPredicted RBP19.84■□□□□ 0.77
UPF3A-203ENST00000474056 DNM3Q9UQ16 869 aa19.84■□□□□ 0.77
UPF3A-203ENST00000474056 A0A1B0GUA9 196 aa19.83■□□□□ 0.77
UPF3A-203ENST00000474056 HIDE1A8MVS5 230 aa19.83■□□□□ 0.77
UPF3A-203ENST00000474056 DDHD2O94830 711 aa19.83■□□□□ 0.77
UPF3A-203ENST00000474056 NPTXRO95502 500 aa19.83■□□□□ 0.77
UPF3A-203ENST00000474056 GLP2RO95838 553 aa19.83■□□□□ 0.77
UPF3A-203ENST00000474056 POMCP01189 267 aa19.83■□□□□ 0.77
UPF3A-203ENST00000474056 EDN1P05305 212 aa19.83■□□□□ 0.77
UPF3A-203ENST00000474056 GALTP07902 379 aa19.83■□□□□ 0.77
UPF3A-203ENST00000474056 ZRSR1Q15695 479 aaKnown RBP19.83■□□□□ 0.77
UPF3A-203ENST00000474056 FAM187BQ17R55 369 aa19.83■□□□□ 0.77
UPF3A-203ENST00000474056 ARL6IP4Q66PJ3 421 aaKnown RBP19.83■□□□□ 0.77
UPF3A-203ENST00000474056 PDE12Q6L8Q7 609 aaKnown RBP19.83■□□□□ 0.77
UPF3A-203ENST00000474056 SLC27A1Q6PCB7 646 aa19.83■□□□□ 0.77
UPF3A-203ENST00000474056 BCL7CQ8WUZ0 217 aaPredicted RBP19.83■□□□□ 0.77
UPF3A-203ENST00000474056 TMEM169Q96HH4 297 aa19.83■□□□□ 0.77
UPF3A-203ENST00000474056 PNMA5Q96PV4 448 aa19.83■□□□□ 0.77
UPF3A-203ENST00000474056 KIFC3Q9BVG8 833 aa19.83■□□□□ 0.77
UPF3A-203ENST00000474056 TRIM6Q9C030 488 aaPredicted RBP19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms