RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 NME8Q8N427 588 aa10.09□□□□□ -0.79
SMC4-214ENST00000472991 KCTD17Q8N5Z5 321 aa10.09□□□□□ -0.79
SMC4-214ENST00000472991 PDILTQ8N807 584 aa10.09□□□□□ -0.79
SMC4-214ENST00000472991 LARP4BQ92615 738 aaKnown RBP10.09□□□□□ -0.79
SMC4-214ENST00000472991 RAD54LQ92698 747 aa10.09□□□□□ -0.79
SMC4-214ENST00000472991 GDF15Q99988 308 aa10.09□□□□□ -0.79
SMC4-214ENST00000472991 RUSC1Q9BVN2 902 aa10.09□□□□□ -0.79
SMC4-214ENST00000472991 PANK2Q9BZ23 570 aa10.09□□□□□ -0.79
SMC4-214ENST00000472991 OSBPL7Q9BZF2 842 aa10.09□□□□□ -0.79
SMC4-214ENST00000472991 POLR3FQ9H1D9 316 aaPredicted RBP10.09□□□□□ -0.79
SMC4-214ENST00000472991 IL23AQ9NPF7 189 aa10.09□□□□□ -0.79
SMC4-214ENST00000472991 GPRC5CQ9NQ84 441 aa10.09□□□□□ -0.79
SMC4-214ENST00000472991 SUCLA2Q9P2R7 463 aaPredicted RBP10.09□□□□□ -0.79
SMC4-214ENST00000472991 GINS2Q9Y248 185 aa10.09□□□□□ -0.79
SMC4-214ENST00000472991 NLRC5Q86WI3 1866 aa10.08□□□□□ -0.8
SMC4-214ENST00000472991 TRIOBPQ9H2D6 2365 aa10.08□□□□□ -0.8
SMC4-214ENST00000472991 TTC3P53804 2025 aa10.08□□□□□ -0.8
SMC4-214ENST00000472991 GHRP10912 638 aa10.08□□□□□ -0.8
SMC4-214ENST00000472991 CYP11B2P19099 503 aa10.08□□□□□ -0.8
SMC4-214ENST00000472991 RFC2P35250 354 aa10.08□□□□□ -0.8
SMC4-214ENST00000472991 STAT6P42226 847 aa10.08□□□□□ -0.8
SMC4-214ENST00000472991 GPC3P51654 580 aa10.08□□□□□ -0.8
SMC4-214ENST00000472991 EPHB4P54760 987 aa10.08□□□□□ -0.8
SMC4-214ENST00000472991 SLC12A3P55017 1021 aa10.08□□□□□ -0.8
SMC4-214ENST00000472991 NLRP11P59045 1033 aaKnown RBP10.08□□□□□ -0.8
SMC4-214ENST00000472991 DHX8Q14562 1220 aaKnown RBP10.08□□□□□ -0.8
SMC4-214ENST00000472991 MCM6Q14566 821 aa10.08□□□□□ -0.8
SMC4-214ENST00000472991 GPNMBQ14956 572 aa10.08□□□□□ -0.8
SMC4-214ENST00000472991 NAALADL2Q58DX5 795 aa10.08□□□□□ -0.8
SMC4-214ENST00000472991 FBXO47Q5MNV8 452 aa10.08□□□□□ -0.8
SMC4-214ENST00000472991 RRAGBQ5VZM2 374 aa10.08□□□□□ -0.8
SMC4-214ENST00000472991 RESP18Q5W5W9 173 aa10.08□□□□□ -0.8
SMC4-214ENST00000472991 ADALQ6DHV7 355 aa10.08□□□□□ -0.8
SMC4-214ENST00000472991 RINT1Q6NUQ1 792 aa10.08□□□□□ -0.8
SMC4-214ENST00000472991 CCDC73Q6ZRK6 1079 aa10.08□□□□□ -0.8
SMC4-214ENST00000472991 GPBP1Q86WP2 473 aa10.08□□□□□ -0.8
SMC4-214ENST00000472991 RHPN2Q8IUC4 686 aa10.08□□□□□ -0.8
SMC4-214ENST00000472991 KSR1Q8IVT5 923 aa10.08□□□□□ -0.8
SMC4-214ENST00000472991 SYT2Q8N9I0 419 aaPredicted RBP10.08□□□□□ -0.8
SMC4-214ENST00000472991 MCPH1Q8NEM0 835 aa10.08□□□□□ -0.8
SMC4-214ENST00000472991 FAM174AQ8TBP5 190 aa10.08□□□□□ -0.8
SMC4-214ENST00000472991 TCP11Q8WWU5 503 aa10.08□□□□□ -0.8
SMC4-214ENST00000472991 PRPF31Q8WWY3 499 aaKnown RBP10.08□□□□□ -0.8
SMC4-214ENST00000472991 PSPC1Q8WXF1 523 aaKnown RBP10.08□□□□□ -0.8
SMC4-214ENST00000472991 TSC1Q92574 1164 aa10.08□□□□□ -0.8
SMC4-214ENST00000472991 VWCEQ96DN2 955 aa10.08□□□□□ -0.8
SMC4-214ENST00000472991 NLRP4Q96MN2 994 aa10.08□□□□□ -0.8
SMC4-214ENST00000472991 SCLT1Q96NL6 688 aa10.08□□□□□ -0.8
SMC4-214ENST00000472991 OSMRQ99650 979 aa10.08□□□□□ -0.8
SMC4-214ENST00000472991 CELF4Q9BZC1 486 aaKnown RBP10.08□□□□□ -0.8
SMC4-214ENST00000472991 POLD4Q9HCU8 107 aa10.08□□□□□ -0.8
SMC4-214ENST00000472991 FAM13BQ9NYF5 915 aa10.08□□□□□ -0.8
SMC4-214ENST00000472991 STK17AQ9UEE5 414 aa10.08□□□□□ -0.8
SMC4-214ENST00000472991 COL4A3BPQ9Y5P4 624 aa10.08□□□□□ -0.8
SMC4-214ENST00000472991 FNDC1Q4ZHG4 1894 aaPredicted RBP10.08□□□□□ -0.8
SMC4-214ENST00000472991 KIAA1671Q9BY89 1806 aa10.07□□□□□ -0.8
SMC4-214ENST00000472991 CITO14578 2027 aa10.07□□□□□ -0.8
SMC4-214ENST00000472991 A0A087WZ62 844 aa10.07□□□□□ -0.8
SMC4-214ENST00000472991 GPR32O75388 356 aa10.07□□□□□ -0.8
SMC4-214ENST00000472991 PARNO95453 639 aaKnown RBP10.07□□□□□ -0.8
SMC4-214ENST00000472991 CXCL10P02778 98 aa10.07□□□□□ -0.8
SMC4-214ENST00000472991 RAD51AP2Q09MP3 1159 aa10.07□□□□□ -0.8
SMC4-214ENST00000472991 LAMTOR4Q0VGL1 99 aa10.07□□□□□ -0.8
SMC4-214ENST00000472991 NNTQ13423 1086 aa10.07□□□□□ -0.8
SMC4-214ENST00000472991 LPIN1Q14693 890 aa10.07□□□□□ -0.8
SMC4-214ENST00000472991 C4orf48Q5BLP8 95 aa10.07□□□□□ -0.8
SMC4-214ENST00000472991 FAM102BQ5T8I3 360 aa10.07□□□□□ -0.8
SMC4-214ENST00000472991 PSRC1Q6PGN9 363 aaPredicted RBP10.07□□□□□ -0.8
SMC4-214ENST00000472991 C1orf186Q6ZWK4 172 aa10.07□□□□□ -0.8
SMC4-214ENST00000472991 ASAP3Q8TDY4 903 aa10.07□□□□□ -0.8
SMC4-214ENST00000472991 TMEM40Q8WWA1 233 aa10.07□□□□□ -0.8
SMC4-214ENST00000472991 DHX58Q96C10 678 aa10.07□□□□□ -0.8
SMC4-214ENST00000472991 CDK15Q96Q40 435 aa10.07□□□□□ -0.8
SMC4-214ENST00000472991 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.07□□□□□ -0.82e-9■■■■■ 123.9
SMC4-214ENST00000472991 FDXACB1Q9BRP7 624 aaPredicted RBP10.07□□□□□ -0.8
SMC4-214ENST00000472991 UBE2OQ9C0C9 1292 aaKnown RBP10.07□□□□□ -0.8
SMC4-214ENST00000472991 ADAMTS10Q9H324 1103 aa10.07□□□□□ -0.8
SMC4-214ENST00000472991 TDRD15B5MCY1 1934 aaKnown RBP10.07□□□□□ -0.8
SMC4-214ENST00000472991 NPHP3-ACAD11A0A0J9YXS1 232 aa10.06□□□□□ -0.8
SMC4-214ENST00000472991 A0A1B0GVL5 298 aa10.06□□□□□ -0.8
SMC4-214ENST00000472991 A0A1W2PQ27 194 aa10.06□□□□□ -0.8
SMC4-214ENST00000472991 A0A1W2PQ64 194 aa10.06□□□□□ -0.8
SMC4-214ENST00000472991 A0A1W2PQD8 194 aa10.06□□□□□ -0.8
SMC4-214ENST00000472991 HIP1RO75146 1068 aa10.06□□□□□ -0.8
SMC4-214ENST00000472991 PFKMP08237 780 aa10.06□□□□□ -0.8
SMC4-214ENST00000472991 SRGAP2CP0DJJ0 459 aa10.06□□□□□ -0.8
SMC4-214ENST00000472991 PFKFB1P16118 471 aa10.06□□□□□ -0.8
SMC4-214ENST00000472991 GLRA2P23416 452 aa10.06□□□□□ -0.8
SMC4-214ENST00000472991 CMA1P23946 247 aa10.06□□□□□ -0.8
SMC4-214ENST00000472991 GUCY2CP25092 1073 aa10.06□□□□□ -0.8
SMC4-214ENST00000472991 CD52P31358 61 aa10.06□□□□□ -0.8
SMC4-214ENST00000472991 ARL2P36404 184 aa10.06□□□□□ -0.8
SMC4-214ENST00000472991 CRYBB1P53674 252 aaPredicted RBP10.06□□□□□ -0.8
SMC4-214ENST00000472991 MAPK7Q13164 816 aa10.06□□□□□ -0.8
SMC4-214ENST00000472991 CAPSQ13938 189 aa10.06□□□□□ -0.8
SMC4-214ENST00000472991 MXD4Q14582 209 aaPredicted RBP10.06□□□□□ -0.8
SMC4-214ENST00000472991 TCTN1Q2MV58 587 aa10.06□□□□□ -0.8
SMC4-214ENST00000472991 TMEM240Q5SV17 173 aa10.06□□□□□ -0.8
SMC4-214ENST00000472991 C9orf50Q5SZB4 431 aa10.06□□□□□ -0.8
SMC4-214ENST00000472991 TSHZ1Q6ZSZ6 1077 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms