RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 BRD1O95696 1058 aa10.21□□□□□ -0.77
SMC4-213ENST00000472282 VTNP04004 478 aa10.21□□□□□ -0.77
SMC4-213ENST00000472282 NDUFV2P19404 249 aa10.21□□□□□ -0.77
SMC4-213ENST00000472282 IBSPP21815 317 aaPredicted RBP10.21□□□□□ -0.77
SMC4-213ENST00000472282 CTNNB1P35222 781 aa10.21□□□□□ -0.77
SMC4-213ENST00000472282 CLCN3P51790 818 aa10.21□□□□□ -0.77
SMC4-213ENST00000472282 KCNH2Q12809 1159 aa10.21□□□□□ -0.77
SMC4-213ENST00000472282 PAK2Q13177 524 aa10.21□□□□□ -0.77
SMC4-213ENST00000472282 BTG3Q14201 252 aaPredicted RBP10.21□□□□□ -0.77
SMC4-213ENST00000472282 SF3A1Q15459 793 aaKnown RBP10.21□□□□□ -0.77
SMC4-213ENST00000472282 PAN2Q504Q3 1202 aaKnown RBP10.21□□□□□ -0.77
SMC4-213ENST00000472282 TCEAL5Q5H9L2 206 aa10.21□□□□□ -0.77
SMC4-213ENST00000472282 ZNF484Q5JVG2 852 aa10.21□□□□□ -0.77
SMC4-213ENST00000472282 CKAP2LQ8IYA6 745 aa10.21□□□□□ -0.77
SMC4-213ENST00000472282 LINC01465Q8N7H1 131 aa10.21□□□□□ -0.77
SMC4-213ENST00000472282 BANK1Q8NDB2 785 aa10.21□□□□□ -0.77
SMC4-213ENST00000472282 ZNF668Q96K58 619 aaPredicted RBP10.21□□□□□ -0.77
SMC4-213ENST00000472282 SAMD11Q96NU1 681 aa10.21□□□□□ -0.77
SMC4-213ENST00000472282 USP28Q96RU2 1077 aa10.21□□□□□ -0.77
SMC4-213ENST00000472282 OSMRQ99650 979 aa10.21□□□□□ -0.77
SMC4-213ENST00000472282 UBE2ZQ9H832 354 aaPredicted RBP10.21□□□□□ -0.77
SMC4-213ENST00000472282 CD320Q9NPF0 282 aa10.21□□□□□ -0.77
SMC4-213ENST00000472282 ZDHHC9Q9Y397 364 aa10.21□□□□□ -0.77
SMC4-213ENST00000472282 CLIC4Q9Y696 253 aa10.21□□□□□ -0.77
SMC4-213ENST00000472282 TMEM150BA6NC51 233 aa10.2□□□□□ -0.78
SMC4-213ENST00000472282 GPR32O75388 356 aa10.2□□□□□ -0.78
SMC4-213ENST00000472282 ZMYND10O75800 440 aa10.2□□□□□ -0.78
SMC4-213ENST00000472282 STBD1O95210 358 aa10.2□□□□□ -0.78
SMC4-213ENST00000472282 BMP15O95972 392 aa10.2□□□□□ -0.78
SMC4-213ENST00000472282 IL9P15248 144 aa10.2□□□□□ -0.78
SMC4-213ENST00000472282 KCNA5P22460 613 aa10.2□□□□□ -0.78
SMC4-213ENST00000472282 DNAJB1P25685 340 aa10.2□□□□□ -0.78
SMC4-213ENST00000472282 BMPR1AP36894 532 aa10.2□□□□□ -0.78
SMC4-213ENST00000472282 PRPHP41219 470 aa10.2□□□□□ -0.78
SMC4-213ENST00000472282 TECP42680 631 aa10.2□□□□□ -0.78
SMC4-213ENST00000472282 PRKCEQ02156 737 aa10.2□□□□□ -0.78
SMC4-213ENST00000472282 CEBPZQ03701 1054 aaKnown RBP10.2□□□□□ -0.78
SMC4-213ENST00000472282 CAMK1Q14012 370 aa10.2□□□□□ -0.78
SMC4-213ENST00000472282 EPHA7Q15375 998 aa10.2□□□□□ -0.78
SMC4-213ENST00000472282 AAK1Q2M2I8 961 aa10.2□□□□□ -0.78
SMC4-213ENST00000472282 KIZQ2M2Z5 673 aa10.2□□□□□ -0.78
SMC4-213ENST00000472282 FAM228AQ86W67 206 aa10.2□□□□□ -0.78
SMC4-213ENST00000472282 NME8Q8N427 588 aa10.2□□□□□ -0.78
SMC4-213ENST00000472282 LRRC71Q8N4P6 559 aa10.2□□□□□ -0.78
SMC4-213ENST00000472282 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.2□□□□□ -0.78
SMC4-213ENST00000472282 TNPO1Q92973 898 aaKnown RBP10.2□□□□□ -0.78
SMC4-213ENST00000472282 CLP1Q92989 425 aaKnown RBP10.2□□□□□ -0.78
SMC4-213ENST00000472282 ZNF396Q96N95 335 aaPredicted RBP10.2□□□□□ -0.78
SMC4-213ENST00000472282 SH2D3AQ9BRG2 576 aa10.2□□□□□ -0.78
SMC4-213ENST00000472282 ST3GAL5Q9UNP4 418 aa10.2□□□□□ -0.78
SMC4-213ENST00000472282 CEP131Q9UPN4 1083 aa10.2□□□□□ -0.78
SMC4-213ENST00000472282 VWA3AA6NCI4 1184 aa10.19□□□□□ -0.78
SMC4-213ENST00000472282 RPS6KA5O75582 802 aa10.19□□□□□ -0.78
SMC4-213ENST00000472282 RPLP2P05387 115 aaKnown RBP10.19□□□□□ -0.78
SMC4-213ENST00000472282 VARSP26640 1264 aaKnown RBP10.19□□□□□ -0.78
SMC4-213ENST00000472282 GTF2F1P35269 517 aaKnown RBP eCLIP10.19□□□□□ -0.788e-49■■■■■ 172.1
SMC4-213ENST00000472282 DDIT3P35638 169 aa10.19□□□□□ -0.78
SMC4-213ENST00000472282 CYP4A11Q02928 519 aa10.19□□□□□ -0.78
SMC4-213ENST00000472282 DRP2Q13474 957 aa10.19□□□□□ -0.78
SMC4-213ENST00000472282 PTPAQ15257 358 aa10.19□□□□□ -0.78
SMC4-213ENST00000472282 IL17AQ16552 155 aa10.19□□□□□ -0.78
SMC4-213ENST00000472282 EFCAB12Q6NXP0 572 aa10.19□□□□□ -0.78
SMC4-213ENST00000472282 DTHD1Q6ZMT9 781 aa10.19□□□□□ -0.78
SMC4-213ENST00000472282 NPAS4Q8IUM7 802 aa10.19□□□□□ -0.78
SMC4-213ENST00000472282 METTL13Q8N6R0 699 aa10.19□□□□□ -0.78
SMC4-213ENST00000472282 DYDC2Q96IM9 177 aa10.19□□□□□ -0.78
SMC4-213ENST00000472282 CEP89Q96ST8 783 aa10.19□□□□□ -0.78
SMC4-213ENST00000472282 ADAM2Q99965 735 aa10.19□□□□□ -0.78
SMC4-213ENST00000472282 EIF2AK1Q9BQI3 630 aaKnown RBP10.19□□□□□ -0.78
SMC4-213ENST00000472282 LXNQ9BS40 222 aa10.19□□□□□ -0.78
SMC4-213ENST00000472282 FTHL17Q9BXU8 183 aa10.19□□□□□ -0.78
SMC4-213ENST00000472282 ALG13Q9NP73 1137 aaKnown RBP10.19□□□□□ -0.78
SMC4-213ENST00000472282 RGL1Q9NZL6 768 aa10.19□□□□□ -0.78
SMC4-213ENST00000472282 RAPGEFL1Q9UHV5 662 aa10.19□□□□□ -0.78
SMC4-213ENST00000472282 TTC28Q96AY4 2481 aa10.19□□□□□ -0.78
SMC4-213ENST00000472282 XIRP2A4UGR9 3374 aa10.18□□□□□ -0.78
SMC4-213ENST00000472282 PP2D1A8MPX8 630 aa10.18□□□□□ -0.78
SMC4-213ENST00000472282 C9IYK1 514 aa10.18□□□□□ -0.78
SMC4-213ENST00000472282 H3BQ06 376 aaPredicted RBP10.18□□□□□ -0.78
SMC4-213ENST00000472282 ITGB1P05556 798 aa10.18□□□□□ -0.78
SMC4-213ENST00000472282 P4HBP07237 508 aaKnown RBP10.18□□□□□ -0.78
SMC4-213ENST00000472282 MARCKSP29966 332 aaPredicted RBP10.18□□□□□ -0.78
SMC4-213ENST00000472282 IRS1P35568 1242 aa10.18□□□□□ -0.78
SMC4-213ENST00000472282 LTBRP36941 435 aa10.18□□□□□ -0.78
SMC4-213ENST00000472282 QARSP47897 775 aaKnown RBP10.18□□□□□ -0.78
SMC4-213ENST00000472282 NASPP49321 788 aaPredicted RBP10.18□□□□□ -0.78
SMC4-213ENST00000472282 SARSP49591 514 aaKnown RBP10.18□□□□□ -0.78
SMC4-213ENST00000472282 CRYBB1P53674 252 aaPredicted RBP10.18□□□□□ -0.78
SMC4-213ENST00000472282 NLRP11P59045 1033 aaKnown RBP10.18□□□□□ -0.78
SMC4-213ENST00000472282 PSMC5P62195 406 aa10.18□□□□□ -0.78
SMC4-213ENST00000472282 DNM1Q05193 864 aaKnown RBP10.18□□□□□ -0.78
SMC4-213ENST00000472282 DLX2Q07687 328 aaPredicted RBP10.18□□□□□ -0.78
SMC4-213ENST00000472282 CTTNQ14247 550 aaKnown RBP10.18□□□□□ -0.78
SMC4-213ENST00000472282 DSC3Q14574 896 aa10.18□□□□□ -0.78
SMC4-213ENST00000472282 COL19A1Q14993 1142 aa10.18□□□□□ -0.78
SMC4-213ENST00000472282 STK38Q15208 465 aa10.18□□□□□ -0.78
SMC4-213ENST00000472282 PTPROQ16827 1216 aa10.18□□□□□ -0.78
SMC4-213ENST00000472282 LEXMQ3ZCV2 418 aa10.18□□□□□ -0.78
SMC4-213ENST00000472282 LINC01559Q495D7 138 aa10.18□□□□□ -0.78
SMC4-213ENST00000472282 TIGD5Q53EQ6 642 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms