RNA–Protein interactions for RNA: ENST00000471470.1

CDC45-208, Transcript of cell division cycle 45, human

TSL 5

Gene CDC45, Length 857 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC45-208	ENST00000471470	STX1A	Q16623	288 aa		13.92	□□□□□ -0.18
CDC45-208	ENST00000471470	AMHR2	Q16671	573 aa		13.92	□□□□□ -0.18
CDC45-208	ENST00000471470	ISM2	Q6H9L7	571 aa		13.92	□□□□□ -0.18
CDC45-208	ENST00000471470	ZPBP2	Q6X784	338 aa		13.92	□□□□□ -0.18
CDC45-208	ENST00000471470	CATSPER4	Q7RTX7	472 aa		13.92	□□□□□ -0.18
CDC45-208	ENST00000471470	TRIM43	Q96BQ3	446 aa	Predicted RBP	13.92	□□□□□ -0.18
CDC45-208	ENST00000471470	DHTKD1	Q96HY7	919 aa	Predicted RBP	13.92	□□□□□ -0.18
CDC45-208	ENST00000471470	ANP32E	Q9BTT0	268 aa		13.92	□□□□□ -0.18
CDC45-208	ENST00000471470	MRPL4	Q9BYD3	311 aa	Known RBP	13.92	□□□□□ -0.18
CDC45-208	ENST00000471470	PPP1R12C	Q9BZL4	782 aa		13.92	□□□□□ -0.18
CDC45-208	ENST00000471470	WNT8A	Q9H1J5	351 aa		13.92	□□□□□ -0.18
CDC45-208	ENST00000471470	PRDM5	Q9NQX1	630 aa	Predicted RBP	13.92	□□□□□ -0.18
CDC45-208	ENST00000471470	PRKAG2	Q9UGJ0	569 aa		13.92	□□□□□ -0.18
CDC45-208	ENST00000471470	NOC2L	Q9Y3T9	749 aa	Known RBP	13.92	□□□□□ -0.18
CDC45-208	ENST00000471470	UMODL1	Q5DID0	1318 aa		13.91	□□□□□ -0.18
CDC45-208	ENST00000471470	PPP1R3G	B7ZBB8	358 aa		13.91	□□□□□ -0.18
CDC45-208	ENST00000471470	PSMA7	O14818	248 aa		13.91	□□□□□ -0.18
CDC45-208	ENST00000471470	EVI5	O60447	810 aa		13.91	□□□□□ -0.18
CDC45-208	ENST00000471470	TSPAN1	O60635	241 aa		13.91	□□□□□ -0.18
CDC45-208	ENST00000471470	PRPF6	O94906	941 aa	Known RBP	13.91	□□□□□ -0.18
CDC45-208	ENST00000471470	CXCL10	P02778	98 aa		13.91	□□□□□ -0.18
CDC45-208	ENST00000471470	GHR	P10912	638 aa		13.91	□□□□□ -0.18
CDC45-208	ENST00000471470	RAG1	P15918	1043 aa		13.91	□□□□□ -0.18
CDC45-208	ENST00000471470	CYP2C18	P33260	490 aa		13.91	□□□□□ -0.18
CDC45-208	ENST00000471470	HOXD13	P35453	343 aa		13.91	□□□□□ -0.18
CDC45-208	ENST00000471470	PRCP	P42785	496 aa		13.91	□□□□□ -0.18
CDC45-208	ENST00000471470	PAK2	Q13177	524 aa		13.91	□□□□□ -0.18
CDC45-208	ENST00000471470	PRPF4B	Q13523	1007 aa	Known RBP	13.91	□□□□□ -0.18
CDC45-208	ENST00000471470	KNOP1	Q1ED39	458 aa	Known RBP	13.91	□□□□□ -0.18
CDC45-208	ENST00000471470	FAM228A	Q86W67	206 aa		13.91	□□□□□ -0.18
CDC45-208	ENST00000471470	SMYD4	Q8IYR2	804 aa	Predicted RBP	13.91	□□□□□ -0.18
CDC45-208	ENST00000471470	GOLGA5	Q8TBA6	731 aa		13.91	□□□□□ -0.18
CDC45-208	ENST00000471470	FUCA2	Q9BTY2	467 aa		13.91	□□□□□ -0.18
CDC45-208	ENST00000471470	ERVK-5	Q9HDB9	667 aa		13.91	□□□□□ -0.18
CDC45-208	ENST00000471470	CHST12	Q9NRB3	414 aa		13.91	□□□□□ -0.18
CDC45-208	ENST00000471470	CGN	Q9P2M7	1197 aa	Known RBP	13.91	□□□□□ -0.18
CDC45-208	ENST00000471470	SI	P14410	1827 aa		13.91	□□□□□ -0.18
CDC45-208	ENST00000471470	DNAH12	Q6ZR08	3092 aa		13.9	□□□□□ -0.18
CDC45-208	ENST00000471470	PDXK	O00764	312 aa		13.9	□□□□□ -0.18
CDC45-208	ENST00000471470	HNRNPDL	O14979	420 aa	Known RBP	13.9	□□□□□ -0.18
CDC45-208	ENST00000471470	NBN	O60934	754 aa		13.9	□□□□□ -0.18
CDC45-208	ENST00000471470	CSDE1	O75534	798 aa	Known RBP	13.9	□□□□□ -0.18
CDC45-208	ENST00000471470	ERCC5	P28715	1186 aa	Predicted RBP	13.9	□□□□□ -0.18
CDC45-208	ENST00000471470	CCL23	P55773	120 aa		13.9	□□□□□ -0.18
CDC45-208	ENST00000471470	KCNA1	Q09470	495 aa		13.9	□□□□□ -0.18
CDC45-208	ENST00000471470	DPCR1	Q3MIW9	517 aa		13.9	□□□□□ -0.18
CDC45-208	ENST00000471470	MFSD5	Q6N075	450 aa		13.9	□□□□□ -0.18
CDC45-208	ENST00000471470	FOXR2	Q6PJQ5	311 aa		13.9	□□□□□ -0.18
CDC45-208	ENST00000471470	NELFCD	Q8IXH7	590 aa		13.9	□□□□□ -0.18
CDC45-208	ENST00000471470	C7orf61	Q8IZ16	206 aa		13.9	□□□□□ -0.18
CDC45-208	ENST00000471470	SYCP3	Q8IZU3	236 aa		13.9	□□□□□ -0.18
CDC45-208	ENST00000471470	TMEM199	Q8N511	208 aa		13.9	□□□□□ -0.18
CDC45-208	ENST00000471470	CCDC51	Q96ER9	411 aa		13.9	□□□□□ -0.18
CDC45-208	ENST00000471470	ACO2	Q99798	780 aa	Known RBP	13.9	□□□□□ -0.18
CDC45-208	ENST00000471470	GBP3	Q9H0R5	595 aa		13.9	□□□□□ -0.18
CDC45-208	ENST00000471470	KCTD10	Q9H3F6	313 aa		13.9	□□□□□ -0.18
CDC45-208	ENST00000471470	AGO3	Q9H9G7	860 aa	Known RBP	13.9	□□□□□ -0.18
CDC45-208	ENST00000471470	AGPAT5	Q9NUQ2	364 aa		13.9	□□□□□ -0.18
CDC45-208	ENST00000471470	TYW1	Q9NV66	732 aa	Known RBP	13.9	□□□□□ -0.18
CDC45-208	ENST00000471470	PADI3	Q9ULW8	664 aa		13.9	□□□□□ -0.18
CDC45-208	ENST00000471470	ST3GAL5	Q9UNP4	418 aa		13.9	□□□□□ -0.18
CDC45-208	ENST00000471470	MAPK8IP1	Q9UQF2	711 aa		13.9	□□□□□ -0.18
CDC45-208	ENST00000471470	TNFSF13B	Q9Y275	285 aa		13.9	□□□□□ -0.18
CDC45-208	ENST00000471470	ZMYM2	Q9UBW7	1377 aa		13.9	□□□□□ -0.18
CDC45-208	ENST00000471470	TANC1	Q9C0D5	1861 aa		13.9	□□□□□ -0.18
CDC45-208	ENST00000471470		A0A1B0GUA9	196 aa		13.89	□□□□□ -0.19
CDC45-208	ENST00000471470	B4GALT5	O43286	388 aa		13.89	□□□□□ -0.19
CDC45-208	ENST00000471470	TOM1L1	O75674	476 aa		13.89	□□□□□ -0.19
CDC45-208	ENST00000471470	CAVIN2	O95810	425 aa		13.89	□□□□□ -0.19
CDC45-208	ENST00000471470	EDN1	P05305	212 aa		13.89	□□□□□ -0.19
CDC45-208	ENST00000471470	PFKM	P08237	780 aa		13.89	□□□□□ -0.19
CDC45-208	ENST00000471470	CD44	P16070	742 aa	Known RBP	13.89	□□□□□ -0.19
CDC45-208	ENST00000471470	ARF4	P18085	180 aa	Predicted RBP	13.89	□□□□□ -0.19
CDC45-208	ENST00000471470	FGFR4	P22455	802 aa		13.89	□□□□□ -0.19
CDC45-208	ENST00000471470	CCNE1	P24864	410 aa		13.89	□□□□□ -0.19
CDC45-208	ENST00000471470	HOXA11	P31270	313 aa	Predicted RBP	13.89	□□□□□ -0.19
CDC45-208	ENST00000471470	CD52	P31358	61 aa		13.89	□□□□□ -0.19
CDC45-208	ENST00000471470	LIG4	P49917	911 aa		13.89	□□□□□ -0.19
CDC45-208	ENST00000471470	ZNF445	P59923	1031 aa		13.89	□□□□□ -0.19
CDC45-208	ENST00000471470	GPNMB	Q14956	572 aa		13.89	□□□□□ -0.19
CDC45-208	ENST00000471470	PLEKHG4	Q58EX7	1191 aa		13.89	□□□□□ -0.19
CDC45-208	ENST00000471470	ATF7IP2	Q5U623	682 aa		13.89	□□□□□ -0.19
CDC45-208	ENST00000471470	SLFN12L	Q6IEE8	588 aa		13.89	□□□□□ -0.19
CDC45-208	ENST00000471470	CENPP	Q6IPU0	288 aa		13.89	□□□□□ -0.19
CDC45-208	ENST00000471470	NOTUM	Q6P988	496 aa		13.89	□□□□□ -0.19
CDC45-208	ENST00000471470	HS2ST1	Q7LGA3	356 aa		13.89	□□□□□ -0.19
CDC45-208	ENST00000471470	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	13.89	□□□□□ -0.19
CDC45-208	ENST00000471470	TMEM174	Q8WUU8	243 aa		13.89	□□□□□ -0.19
CDC45-208	ENST00000471470	SEPT8	Q92599	483 aa		13.89	□□□□□ -0.19
CDC45-208	ENST00000471470	DPF3	Q92784	378 aa		13.89	□□□□□ -0.19
CDC45-208	ENST00000471470	APBB2	Q92870	758 aa		13.89	□□□□□ -0.19
CDC45-208	ENST00000471470	P2RX5	Q93086	422 aa		13.89	□□□□□ -0.19
CDC45-208	ENST00000471470	BICD1	Q96G01	975 aa		13.89	□□□□□ -0.19
CDC45-208	ENST00000471470	SCLY	Q96I15	445 aa		13.89	□□□□□ -0.19
CDC45-208	ENST00000471470	TARS2	Q9BW92	718 aa	Known RBP	13.89	□□□□□ -0.19
CDC45-208	ENST00000471470	IFIH1	Q9BYX4	1025 aa	Known RBP	13.89	□□□□□ -0.19
CDC45-208	ENST00000471470	GZF1	Q9H116	711 aa	Predicted RBP	13.89	□□□□□ -0.19
CDC45-208	ENST00000471470	TRAF3IP3	Q9Y228	551 aa		13.89	□□□□□ -0.19
CDC45-208	ENST00000471470	STYXL1	Q9Y6J8	313 aa		13.89	□□□□□ -0.19
CDC45-208	ENST00000471470	ALPK3	Q96L96	1907 aa		13.89	□□□□□ -0.19

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