RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 TMTC1Q8IUR5 882 aa10.24□□□□□ -0.77
VPS52-216ENST00000471309 ZBTB8OSQ8IWT0 167 aa10.24□□□□□ -0.77
VPS52-216ENST00000471309 CCAR2Q8N163 923 aaKnown RBP10.24□□□□□ -0.77
VPS52-216ENST00000471309 LRRC71Q8N4P6 559 aa10.24□□□□□ -0.77
VPS52-216ENST00000471309 CCDC155Q8N6L0 562 aa10.24□□□□□ -0.77
VPS52-216ENST00000471309 LINC01465Q8N7H1 131 aa10.24□□□□□ -0.77
VPS52-216ENST00000471309 TRAPPC12Q8WVT3 735 aa10.24□□□□□ -0.77
VPS52-216ENST00000471309 BICD1Q96G01 975 aa10.24□□□□□ -0.77
VPS52-216ENST00000471309 FBXL18Q96ME1 805 aa10.24□□□□□ -0.77
VPS52-216ENST00000471309 LSM14BQ9BX40 385 aaKnown RBP10.24□□□□□ -0.77
VPS52-216ENST00000471309 NFKBIZQ9BYH8 718 aa10.24□□□□□ -0.77
VPS52-216ENST00000471309 ARHGAP39Q9C0H5 1083 aa10.24□□□□□ -0.77
VPS52-216ENST00000471309 PCIF1Q9H4Z3 704 aa10.24□□□□□ -0.77
VPS52-216ENST00000471309 SUGCTQ9HAC7 445 aa10.24□□□□□ -0.77
VPS52-216ENST00000471309 PLCB1Q9NQ66 1216 aa10.24□□□□□ -0.77
VPS52-216ENST00000471309 CEP72Q9P209 647 aa10.24□□□□□ -0.77
VPS52-216ENST00000471309 SUCLA2Q9P2R7 463 aaPredicted RBP10.24□□□□□ -0.77
VPS52-216ENST00000471309 DOCK3Q8IZD9 2030 aa10.24□□□□□ -0.77
VPS52-216ENST00000471309 RRN3P2A6NIE6 340 aa10.23□□□□□ -0.77
VPS52-216ENST00000471309 EPHB6O15197 1021 aa10.23□□□□□ -0.77
VPS52-216ENST00000471309 P4HA2O15460 535 aa10.23□□□□□ -0.77
VPS52-216ENST00000471309 DYNC1LI2O43237 492 aaPredicted RBP10.23□□□□□ -0.77
VPS52-216ENST00000471309 N4BP1O75113 896 aaKnown RBP10.23□□□□□ -0.77
VPS52-216ENST00000471309 ADRB2P07550 413 aa10.23□□□□□ -0.77
VPS52-216ENST00000471309 MAP2K2P36507 400 aa10.23□□□□□ -0.77
VPS52-216ENST00000471309 FMO5P49326 533 aa10.23□□□□□ -0.77
VPS52-216ENST00000471309 FLT3LGP49771 235 aa10.23□□□□□ -0.77
VPS52-216ENST00000471309 CLCN3P51790 818 aa10.23□□□□□ -0.77
VPS52-216ENST00000471309 VAMP7P51809 220 aa10.23□□□□□ -0.77
VPS52-216ENST00000471309 CDK17Q00537 523 aa10.23□□□□□ -0.77
VPS52-216ENST00000471309 SP3Q02447 781 aa10.23□□□□□ -0.77
VPS52-216ENST00000471309 PPFIA1Q13136 1202 aa10.23□□□□□ -0.77
VPS52-216ENST00000471309 KIF22Q14807 665 aa10.23□□□□□ -0.77
VPS52-216ENST00000471309 GRIK4Q16099 956 aa10.23□□□□□ -0.77
VPS52-216ENST00000471309 TSR1Q2NL82 804 aaKnown RBP10.23□□□□□ -0.77
VPS52-216ENST00000471309 MFSD14CQ5VZR4 134 aa10.23□□□□□ -0.77
VPS52-216ENST00000471309 SLFN12LQ6IEE8 588 aa10.23□□□□□ -0.77
VPS52-216ENST00000471309 EFCAB12Q6NXP0 572 aa10.23□□□□□ -0.77
VPS52-216ENST00000471309 CYP26C1Q6V0L0 522 aa10.23□□□□□ -0.77
VPS52-216ENST00000471309 GBP6Q6ZN66 633 aa10.23□□□□□ -0.77
VPS52-216ENST00000471309 USP37Q86T82 979 aa10.23□□□□□ -0.77
VPS52-216ENST00000471309 IFNLR1Q8IU57 520 aaPredicted RBP10.23□□□□□ -0.77
VPS52-216ENST00000471309 GPD1LQ8N335 351 aa10.23□□□□□ -0.77
VPS52-216ENST00000471309 RNF149Q8NC42 400 aa10.23□□□□□ -0.77
VPS52-216ENST00000471309 POMGNT1Q8WZA1 660 aa10.23□□□□□ -0.77
VPS52-216ENST00000471309 TRIB2Q92519 343 aa10.23□□□□□ -0.77
VPS52-216ENST00000471309 BAP1Q92560 729 aa10.23□□□□□ -0.77
VPS52-216ENST00000471309 AP5M1Q9H0R1 490 aa10.23□□□□□ -0.77
VPS52-216ENST00000471309 NUCKS1Q9H1E3 243 aaKnown RBP10.23□□□□□ -0.77
VPS52-216ENST00000471309 GANQ9H2C0 597 aa10.23□□□□□ -0.77
VPS52-216ENST00000471309 KIAA1586Q9HCI6 787 aa10.23□□□□□ -0.77
VPS52-216ENST00000471309 AGPAT5Q9NUQ2 364 aa10.23□□□□□ -0.77
VPS52-216ENST00000471309 FBXL5Q9UKA1 691 aa10.23□□□□□ -0.77
VPS52-216ENST00000471309 GABRQQ9UN88 632 aa10.23□□□□□ -0.77
VPS52-216ENST00000471309 DAAM1Q9Y4D1 1078 aa10.23□□□□□ -0.77
VPS52-216ENST00000471309 SOWAHDA6NJG2 315 aa10.22□□□□□ -0.77
VPS52-216ENST00000471309 USP27XA6NNY8 438 aa10.22□□□□□ -0.77
VPS52-216ENST00000471309 HAS3O00219 553 aa10.22□□□□□ -0.77
VPS52-216ENST00000471309 PMM2O15305 246 aa10.22□□□□□ -0.77
VPS52-216ENST00000471309 ZSCAN12O43309 604 aa10.22□□□□□ -0.77
VPS52-216ENST00000471309 EXTL3O43909 919 aa10.22□□□□□ -0.77
VPS52-216ENST00000471309 MSCO60682 206 aa10.22□□□□□ -0.77
VPS52-216ENST00000471309 DUSP11O75319 330 aaKnown RBP10.22□□□□□ -0.77
VPS52-216ENST00000471309 NOL4O94818 638 aa10.22□□□□□ -0.77
VPS52-216ENST00000471309 TBC1D8O95759 1140 aa10.22□□□□□ -0.77
VPS52-216ENST00000471309 EDN1P05305 212 aa10.22□□□□□ -0.77
VPS52-216ENST00000471309 TRIM49P0CI25 452 aa10.22□□□□□ -0.77
VPS52-216ENST00000471309 TRIM49CP0CI26 452 aa10.22□□□□□ -0.77
VPS52-216ENST00000471309 KLRC1P26715 233 aa10.22□□□□□ -0.77
VPS52-216ENST00000471309 PON1P27169 355 aa10.22□□□□□ -0.77
VPS52-216ENST00000471309 PHKA2P46019 1235 aa10.22□□□□□ -0.77
VPS52-216ENST00000471309 IGBP1P78318 339 aa10.22□□□□□ -0.77
VPS52-216ENST00000471309 MYL7Q01449 175 aa10.22□□□□□ -0.77
VPS52-216ENST00000471309 PRKCZQ05513 592 aa10.22□□□□□ -0.77
VPS52-216ENST00000471309 EXOC3L4Q17RC7 722 aa10.22□□□□□ -0.77
VPS52-216ENST00000471309 DPY19L2P1Q6NXN4 242 aa10.22□□□□□ -0.77
VPS52-216ENST00000471309 PDXDC1Q6P996 788 aa10.22□□□□□ -0.77
VPS52-216ENST00000471309 WDR59Q6PJI9 974 aa10.22□□□□□ -0.77
VPS52-216ENST00000471309 MTHFD1LQ6UB35 978 aa10.22□□□□□ -0.77
VPS52-216ENST00000471309 RAD9BQ6WBX8 426 aa10.22□□□□□ -0.77
VPS52-216ENST00000471309 CACNA2D4Q7Z3S7 1137 aa10.22□□□□□ -0.77
VPS52-216ENST00000471309 RHPN2Q8IUC4 686 aa10.22□□□□□ -0.77
VPS52-216ENST00000471309 CBWD2Q8IUF1 395 aa10.22□□□□□ -0.77
VPS52-216ENST00000471309 METTL13Q8N6R0 699 aa10.22□□□□□ -0.77
VPS52-216ENST00000471309 TRPV1Q8NER1 839 aa10.22□□□□□ -0.77
VPS52-216ENST00000471309 TMC2Q8TDI7 906 aa10.22□□□□□ -0.77
VPS52-216ENST00000471309 SYN2Q92777 582 aaPredicted RBP10.22□□□□□ -0.77
VPS52-216ENST00000471309 KAT2BQ92831 832 aa10.22□□□□□ -0.77
VPS52-216ENST00000471309 LENG1Q96BZ8 264 aaPredicted RBP10.22□□□□□ -0.77
VPS52-216ENST00000471309 SAAL1Q96ER3 474 aa10.22□□□□□ -0.77
VPS52-216ENST00000471309 PPP1R13BQ96KQ4 1090 aa10.22□□□□□ -0.77
VPS52-216ENST00000471309 MFSD14AQ96MC6 490 aa10.22□□□□□ -0.77
VPS52-216ENST00000471309 KATNAL1Q9BW62 490 aa10.22□□□□□ -0.77
VPS52-216ENST00000471309 MRPL4Q9BYD3 311 aaKnown RBP10.22□□□□□ -0.77
VPS52-216ENST00000471309 ZNHIT6Q9NWK9 470 aaKnown RBP10.22□□□□□ -0.77
VPS52-216ENST00000471309 GCNT4Q9P109 453 aa10.22□□□□□ -0.77
VPS52-216ENST00000471309 PLAGL2Q9UPG8 496 aa10.22□□□□□ -0.77
VPS52-216ENST00000471309 A0A0B4J269 797 aa10.21□□□□□ -0.77
VPS52-216ENST00000471309 GOLGA8IPA6NC78 632 aa10.21□□□□□ -0.77
VPS52-216ENST00000471309 GOLGA6L9A6NEM1 432 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms